RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.32
ABCF3-210ENST00000473311 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-210ENST00000473311 MTHFSDQ2M296 383 aaKnown RBP17.08■□□□□ 0.32
ABCF3-210ENST00000473311 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
ABCF3-210ENST00000473311 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
ABCF3-210ENST00000473311 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
ABCF3-210ENST00000473311 DMTNQ08495 405 aa17.06■□□□□ 0.32
ABCF3-210ENST00000473311 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-210ENST00000473311 GNAI2P04899 355 aa17.06■□□□□ 0.32
ABCF3-210ENST00000473311 TSHZ3Q63HK5 1081 aa17.06■□□□□ 0.32
ABCF3-210ENST00000473311 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
ABCF3-210ENST00000473311 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
ABCF3-210ENST00000473311 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
ABCF3-210ENST00000473311 ARHGEF10O15013 1369 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 TNRQ92752 1358 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 TMEM2Q9UHN6 1383 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 NALCNQ8IZF0 1738 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 PRPF40AO75400 957 aaKnown RBP17.05■□□□□ 0.32
ABCF3-210ENST00000473311 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 KIF20AO95235 890 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 NEK4P51957 841 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 ZNF445P59923 1031 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 IPO4Q8TEX9 1081 aaKnown RBP17.05■□□□□ 0.32
ABCF3-210ENST00000473311 PPP1R9BQ96SB3 815 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
ABCF3-210ENST00000473311 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
ABCF3-210ENST00000473311 ZDHHC9Q9Y397 364 aa17.03■□□□□ 0.32
ABCF3-210ENST00000473311 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
ABCF3-210ENST00000473311 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-210ENST00000473311 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-210ENST00000473311 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-210ENST00000473311 NECTIN2Q92692 538 aa17.03■□□□□ 0.32
ABCF3-210ENST00000473311 LRRCC1Q9C099 1032 aa17.03■□□□□ 0.32
ABCF3-210ENST00000473311 MSNP26038 577 aaKnown RBP17.02■□□□□ 0.32
ABCF3-210ENST00000473311 AMPHP49418 695 aa17.02■□□□□ 0.32
ABCF3-210ENST00000473311 FAM13BQ9NYF5 915 aa17.02■□□□□ 0.32
ABCF3-210ENST00000473311 FLT4P35916 1363 aa17.02■□□□□ 0.32
ABCF3-210ENST00000473311 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
ABCF3-210ENST00000473311 DYNC1I1O14576 645 aa17.02■□□□□ 0.31
ABCF3-210ENST00000473311 FLIIQ13045 1269 aa17.02■□□□□ 0.31
ABCF3-210ENST00000473311 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 MX1P20591 662 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 TAF3Q5VWG9 929 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 CHAMP1Q96JM3 812 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 RBM27Q9P2N5 1060 aaKnown RBP17.01■□□□□ 0.31
ABCF3-210ENST00000473311 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 GNAI3P08754 354 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 GPT2Q8TD30 523 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 EYA1Q99502 592 aa17.01■□□□□ 0.31
ABCF3-210ENST00000473311 GTPBP4Q9BZE4 634 aaKnown RBP17.01■□□□□ 0.31
ABCF3-210ENST00000473311 SBNO1A3KN83 1393 aa17■□□□□ 0.31
ABCF3-210ENST00000473311 PNMA6EA0A0J9YXQ4 647 aa17■□□□□ 0.31
ABCF3-210ENST00000473311 MCCP23508 829 aa17■□□□□ 0.31
ABCF3-210ENST00000473311 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
ABCF3-210ENST00000473311 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
ABCF3-210ENST00000473311 ANO2Q9NQ90 1003 aa17■□□□□ 0.31
ABCF3-210ENST00000473311 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
ABCF3-210ENST00000473311 SALL3Q9BXA9 1300 aa16.99■□□□□ 0.31
ABCF3-210ENST00000473311 LTKP29376 864 aa16.99■□□□□ 0.31
ABCF3-210ENST00000473311 NOL8Q76FK4 1167 aaKnown RBP16.99■□□□□ 0.31
ABCF3-210ENST00000473311 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
ABCF3-210ENST00000473311 KDRP35968 1356 aa16.99■□□□□ 0.31
ABCF3-210ENST00000473311 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
ABCF3-210ENST00000473311 HS1BP3Q53T59 392 aa16.99■□□□□ 0.31
ABCF3-210ENST00000473311 RBSNQ9H1K0 784 aa16.99■□□□□ 0.31
ABCF3-210ENST00000473311 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-210ENST00000473311 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
ABCF3-210ENST00000473311 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
ABCF3-210ENST00000473311 MCM2P49736 904 aa16.98■□□□□ 0.31
ABCF3-210ENST00000473311 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
ABCF3-210ENST00000473311 ATP8B2P98198 1209 aa16.97■□□□□ 0.31
ABCF3-210ENST00000473311 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
ABCF3-210ENST00000473311 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
ABCF3-210ENST00000473311 LETM1O95202 739 aaPredicted RBP16.97■□□□□ 0.31
ABCF3-210ENST00000473311 CHMLP26374 656 aa16.97■□□□□ 0.31
ABCF3-210ENST00000473311 CCDC94Q9BW85 323 aaPredicted RBP16.96■□□□□ 0.31
ABCF3-210ENST00000473311 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
ABCF3-210ENST00000473311 PLEKHG1Q9ULL1 1385 aa16.96■□□□□ 0.31
ABCF3-210ENST00000473311 GNAT3A8MTJ3 354 aa16.96■□□□□ 0.3
ABCF3-210ENST00000473311 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
ABCF3-210ENST00000473311 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
ABCF3-210ENST00000473311 FAM208AQ9UK61 1670 aaKnown RBP16.95■□□□□ 0.3
ABCF3-210ENST00000473311 PTPRUQ92729 1446 aa16.95■□□□□ 0.3
ABCF3-210ENST00000473311 SYCE3A1L190 88 aa16.95■□□□□ 0.3
ABCF3-210ENST00000473311 NSFL1CQ9UNZ2 370 aaKnown RBP16.95■□□□□ 0.3
ABCF3-210ENST00000473311 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
ABCF3-210ENST00000473311 ANAPC15P60006 121 aa16.94■□□□□ 0.3
ABCF3-210ENST00000473311 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
ABCF3-210ENST00000473311 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
ABCF3-210ENST00000473311 CUL4AQ13619 759 aa16.94■□□□□ 0.3
ABCF3-210ENST00000473311 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
ABCF3-210ENST00000473311 LRSAM1Q6UWE0 723 aa16.94■□□□□ 0.3
ABCF3-210ENST00000473311 UNC5CLQ8IV45 518 aa16.94■□□□□ 0.3
ABCF3-210ENST00000473311 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
ABCF3-210ENST00000473311 SRCIN1Q9C0H9 1055 aa16.94■□□□□ 0.3
ABCF3-210ENST00000473311 IL1RAPL2Q9NP60 686 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms