RNA–Protein interactions for RNA: ENST00000470143.1

NOP56-210, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-210ENST00000470143 KNSTRNQ9Y448 316 aa18.35■□□□□ 0.53
NOP56-210ENST00000470143 KDRP35968 1356 aa18.34■□□□□ 0.53
NOP56-210ENST00000470143 ITPK1Q13572 414 aa18.34■□□□□ 0.53
NOP56-210ENST00000470143 MSL1Q68DK7 614 aa18.34■□□□□ 0.53
NOP56-210ENST00000470143 COL5A3P25940 1745 aaPredicted RBP18.33■□□□□ 0.52
NOP56-210ENST00000470143 ATP6V1AP38606 617 aa18.33■□□□□ 0.52
NOP56-210ENST00000470143 YBX3P16989 372 aaKnown RBP eCLIP18.31■□□□□ 0.52
NOP56-210ENST00000470143 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
NOP56-210ENST00000470143 RC3H1Q5TC82 1133 aaKnown RBP18.31■□□□□ 0.52
NOP56-210ENST00000470143 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
NOP56-210ENST00000470143 IL13P35225 146 aa18.3■□□□□ 0.52
NOP56-210ENST00000470143 SCN11AQ9UI33 1791 aa18.3■□□□□ 0.52
NOP56-210ENST00000470143 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
NOP56-210ENST00000470143 PHF14O94880 888 aa18.29■□□□□ 0.52
NOP56-210ENST00000470143 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
NOP56-210ENST00000470143 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
NOP56-210ENST00000470143 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
NOP56-210ENST00000470143 CICQ96RK0 1608 aaPredicted RBP18.29■□□□□ 0.52
NOP56-210ENST00000470143 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
NOP56-210ENST00000470143 GNPATO15228 680 aa18.28■□□□□ 0.52
NOP56-210ENST00000470143 ADRA2BP18089 450 aa18.28■□□□□ 0.52
NOP56-210ENST00000470143 MYH14Q7Z406 1995 aaKnown RBP18.28■□□□□ 0.52
NOP56-210ENST00000470143 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
NOP56-210ENST00000470143 PER1O15534 1290 aaPredicted RBP18.27■□□□□ 0.52
NOP56-210ENST00000470143 MTHFSP49914 203 aa18.27■□□□□ 0.52
NOP56-210ENST00000470143 CABP4P57796 275 aa18.27■□□□□ 0.52
NOP56-210ENST00000470143 C1orf141Q5JVX7 400 aa18.27■□□□□ 0.52
NOP56-210ENST00000470143 SULT6B1Q6IMI4 303 aa18.27■□□□□ 0.52
NOP56-210ENST00000470143 AEBP1Q8IUX7 1158 aa18.27■□□□□ 0.52
NOP56-210ENST00000470143 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.52
NOP56-210ENST00000470143 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
NOP56-210ENST00000470143 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
NOP56-210ENST00000470143 C1QTNF8P60827 252 aa18.25■□□□□ 0.51
NOP56-210ENST00000470143 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
NOP56-210ENST00000470143 RPS6KA4O75676 772 aa18.24■□□□□ 0.51
NOP56-210ENST00000470143 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
NOP56-210ENST00000470143 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
NOP56-210ENST00000470143 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
NOP56-210ENST00000470143 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
NOP56-210ENST00000470143 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
NOP56-210ENST00000470143 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
NOP56-210ENST00000470143 C4AP0C0L4 1744 aa18.22■□□□□ 0.51
NOP56-210ENST00000470143 KIAA1551Q9HCM1 1747 aa18.22■□□□□ 0.51
NOP56-210ENST00000470143 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
NOP56-210ENST00000470143 TJP1Q07157 1748 aa18.21■□□□□ 0.51
NOP56-210ENST00000470143 MMP10P09238 476 aa18.21■□□□□ 0.51
NOP56-210ENST00000470143 TGFB2P61812 414 aa18.2■□□□□ 0.5
NOP56-210ENST00000470143 MRC1P22897 1456 aa18.2■□□□□ 0.5
NOP56-210ENST00000470143 ADCY9O60503 1353 aa18.19■□□□□ 0.5
NOP56-210ENST00000470143 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
NOP56-210ENST00000470143 GYS1P13807 737 aa18.19■□□□□ 0.5
NOP56-210ENST00000470143 RFC4P35249 363 aa18.18■□□□□ 0.5
NOP56-210ENST00000470143 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
NOP56-210ENST00000470143 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
NOP56-210ENST00000470143 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
NOP56-210ENST00000470143 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
NOP56-210ENST00000470143 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
NOP56-210ENST00000470143 PXDNLA1KZ92 1463 aa18.17■□□□□ 0.5
NOP56-210ENST00000470143 BRCA1P38398 1863 aaKnown RBP18.17■□□□□ 0.5
NOP56-210ENST00000470143 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
NOP56-210ENST00000470143 N4BP2Q86UW6 1770 aaPredicted RBP18.16■□□□□ 0.5
NOP56-210ENST00000470143 CEP350Q5VT06 3117 aa18.16■□□□□ 0.5
NOP56-210ENST00000470143 RNMTO43148 476 aaKnown RBP18.15■□□□□ 0.5
NOP56-210ENST00000470143 LGR6Q9HBX8 967 aa18.15■□□□□ 0.5
NOP56-210ENST00000470143 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
NOP56-210ENST00000470143 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.5
NOP56-210ENST00000470143 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
NOP56-210ENST00000470143 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
NOP56-210ENST00000470143 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
NOP56-210ENST00000470143 HMOX1P09601 288 aa18.13■□□□□ 0.49
NOP56-210ENST00000470143 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
NOP56-210ENST00000470143 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
NOP56-210ENST00000470143 USP42Q9H9J4 1324 aaKnown RBP18.13■□□□□ 0.49
NOP56-210ENST00000470143 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
NOP56-210ENST00000470143 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
NOP56-210ENST00000470143 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
NOP56-210ENST00000470143 KCPQ6ZWJ8 1503 aa18.12■□□□□ 0.49
NOP56-210ENST00000470143 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
NOP56-210ENST00000470143 GPBP1L1Q9HC44 474 aaPredicted RBP18.1■□□□□ 0.49
NOP56-210ENST00000470143 SOS1Q07889 1333 aaPredicted RBP18.09■□□□□ 0.49
NOP56-210ENST00000470143 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
NOP56-210ENST00000470143 TM4SF1P30408 202 aa18.09■□□□□ 0.49
NOP56-210ENST00000470143 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
NOP56-210ENST00000470143 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
NOP56-210ENST00000470143 DPEP1P16444 411 aa18.08■□□□□ 0.48
NOP56-210ENST00000470143 KCNA3P22001 575 aa18.08■□□□□ 0.48
NOP56-210ENST00000470143 FKBP8Q14318 412 aa18.08■□□□□ 0.48
NOP56-210ENST00000470143 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.48
NOP56-210ENST00000470143 BCS1LQ9Y276 419 aa18.07■□□□□ 0.48
NOP56-210ENST00000470143 NRXN2Q9P2S2 1712 aa18.06■□□□□ 0.48
NOP56-210ENST00000470143 ZPR1O75312 459 aa18.06■□□□□ 0.48
NOP56-210ENST00000470143 DDR1Q08345 913 aa18.06■□□□□ 0.48
NOP56-210ENST00000470143 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
NOP56-210ENST00000470143 GAS2L2Q8NHY3 880 aa18.06■□□□□ 0.48
NOP56-210ENST00000470143 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
NOP56-210ENST00000470143 WWC3Q9ULE0 1092 aa18.06■□□□□ 0.48
NOP56-210ENST00000470143 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
NOP56-210ENST00000470143 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
NOP56-210ENST00000470143 PIM2Q9P1W9 311 aa18.05■□□□□ 0.48
NOP56-210ENST00000470143 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms