RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	WFS1	O76024	890 aa		11.42	□□□□□ -0.58
CCNL1-209	ENST00000467081	GTF2E1	P29083	439 aa	Predicted RBP	11.42	□□□□□ -0.58
CCNL1-209	ENST00000467081	TMEM214	Q6NUQ4	689 aa	Known RBP	11.42	□□□□□ -0.58
CCNL1-209	ENST00000467081	TREML4	Q6UXN2	200 aa		11.42	□□□□□ -0.58
CCNL1-209	ENST00000467081	TPCN2	Q8NHX9	752 aa		11.42	□□□□□ -0.58
CCNL1-209	ENST00000467081	SLC16A10	Q8TF71	515 aa		11.42	□□□□□ -0.58
CCNL1-209	ENST00000467081	KIAA1024	Q9UPX6	916 aa		11.42	□□□□□ -0.58
CCNL1-209	ENST00000467081		H3BM21	787 aa		11.41	□□□□□ -0.58
CCNL1-209	ENST00000467081	RFX1	P22670	979 aa		11.41	□□□□□ -0.58
CCNL1-209	ENST00000467081	NBPF10	Q6P3W6	841 aa	Known RBP	11.41	□□□□□ -0.58
CCNL1-209	ENST00000467081	NPAS3	Q8IXF0	933 aa		11.41	□□□□□ -0.58
CCNL1-209	ENST00000467081	NBPF15	Q8N660	670 aa		11.41	□□□□□ -0.58
CCNL1-209	ENST00000467081	ZNF594	Q96JF6	807 aa	Predicted RBP	11.41	□□□□□ -0.58
CCNL1-209	ENST00000467081	SPATA31C2	B4DYI2	1134 aa		11.4	□□□□□ -0.58
CCNL1-209	ENST00000467081	RASA1	P20936	1047 aa		11.4	□□□□□ -0.58
CCNL1-209	ENST00000467081	CCDC102B	Q68D86	513 aa		11.4	□□□□□ -0.58
CCNL1-209	ENST00000467081	TAS1R3	Q7RTX0	852 aa		11.4	□□□□□ -0.58
CCNL1-209	ENST00000467081	ZNF358	Q9NW07	568 aa		11.4	□□□□□ -0.58
CCNL1-209	ENST00000467081	PHKA2	P46019	1235 aa		11.39	□□□□□ -0.59
CCNL1-209	ENST00000467081	SMTN	P53814	917 aa		11.39	□□□□□ -0.59
CCNL1-209	ENST00000467081	GNAS	Q5JWF2	1037 aa		11.39	□□□□□ -0.59
CCNL1-209	ENST00000467081	KANK4	Q5T7N3	995 aa	Predicted RBP	11.39	□□□□□ -0.59
CCNL1-209	ENST00000467081	LARGE2	Q8N3Y3	721 aa		11.39	□□□□□ -0.59
CCNL1-209	ENST00000467081	VRTN	Q9H8Y1	702 aa		11.39	□□□□□ -0.59
CCNL1-209	ENST00000467081	BACH1	O14867	736 aa		11.38	□□□□□ -0.59
CCNL1-209	ENST00000467081	CCDC97	Q96F63	343 aa	Predicted RBP	11.38	□□□□□ -0.59
CCNL1-209	ENST00000467081	SLC4A9	Q96Q91	983 aa		11.38	□□□□□ -0.59
CCNL1-209	ENST00000467081	CDCA8	Q53HL2	280 aa		11.37	□□□□□ -0.59
CCNL1-209	ENST00000467081	LARP1	Q6PKG0	1096 aa	Known RBP	11.37	□□□□□ -0.59
CCNL1-209	ENST00000467081	ERICH6	Q7L0X2	663 aa		11.37	□□□□□ -0.59
CCNL1-209	ENST00000467081	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.37	□□□□□ -0.59
CCNL1-209	ENST00000467081	TIMMDC1	Q9NPL8	285 aa		11.37	□□□□□ -0.59
CCNL1-209	ENST00000467081	RBM19	Q9Y4C8	960 aa	Known RBP	11.37	□□□□□ -0.59
CCNL1-209	ENST00000467081		A6NJY4	79 aa		11.36	□□□□□ -0.59
CCNL1-209	ENST00000467081	C4orf17	Q53FE4	359 aa		11.36	□□□□□ -0.59
CCNL1-209	ENST00000467081	RHBDD1	Q8TEB9	315 aa		11.36	□□□□□ -0.59
CCNL1-209	ENST00000467081	ERBB4	Q15303	1308 aa		11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	ITGA6	P23229	1130 aa		11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	CRTC2	Q53ET0	693 aa	Predicted RBP	11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	WDR44	Q5JSH3	913 aa		11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	LCE2C	Q5TA81	110 aa		11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	SIX5	Q8N196	739 aa		11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	IRF7	Q92985	503 aa		11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	GAS2L1	Q99501	681 aa	Predicted RBP	11.35	□□□□□ -0.59
CCNL1-209	ENST00000467081	SFI1	A8K8P3	1242 aa		11.34	□□□□□ -0.59
CCNL1-209	ENST00000467081	LCE2A	Q5TA79	106 aa	Predicted RBP	11.34	□□□□□ -0.59
CCNL1-209	ENST00000467081	TNS4	Q8IZW8	715 aa		11.34	□□□□□ -0.59
CCNL1-209	ENST00000467081	SERPINA10	Q9UK55	444 aa		11.34	□□□□□ -0.59
CCNL1-209	ENST00000467081	TIMELESS	Q9UNS1	1208 aa		11.34	□□□□□ -0.59
CCNL1-209	ENST00000467081	DYRK1B	Q9Y463	629 aa		11.34	□□□□□ -0.59
CCNL1-209	ENST00000467081	USP3	Q9Y6I4	520 aa		11.34	□□□□□ -0.59
CCNL1-209	ENST00000467081	USP17L15	C9J2P7	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L10	C9JJH3	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L13	C9JLJ4	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L12	C9JPN9	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L11	C9JVI0	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L21	D6R901	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L18	D6R9N7	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L22	D6RA61	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L17	D6RBQ6	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L19	D6RCP7	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L20	D6RJB6	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	USP17L24	Q0WX57	530 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	PTK7	Q13308	1070 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	MTFR1	Q15390	333 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	RIPOR1	Q6ZS17	1223 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	C1orf115	Q9H7X2	142 aa		11.33	□□□□□ -0.6
CCNL1-209	ENST00000467081	CDC14C	A4D256	554 aa		11.32	□□□□□ -0.6
CCNL1-209	ENST00000467081	CDK2AP1	O14519	115 aa		11.32	□□□□□ -0.6
CCNL1-209	ENST00000467081	DKK1	O94907	266 aa		11.32	□□□□□ -0.6
CCNL1-209	ENST00000467081	PLA2G4A	P47712	749 aa		11.32	□□□□□ -0.6
CCNL1-209	ENST00000467081	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.32	□□□□□ -0.6
CCNL1-209	ENST00000467081	FAM196B	A6NMK8	535 aa		11.31	□□□□□ -0.6
CCNL1-209	ENST00000467081	VWA5B2	Q8N398	1253 aa		11.31	□□□□□ -0.6
CCNL1-209	ENST00000467081	CCDC82	Q8N4S0	544 aa		11.31	□□□□□ -0.6
CCNL1-209	ENST00000467081	NIFK	Q9BYG3	293 aa	Known RBP	11.31	□□□□□ -0.6
CCNL1-209	ENST00000467081	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.31	□□□□□ -0.6
CCNL1-209	ENST00000467081	CABP1	Q9NZU7	370 aa		11.31	□□□□□ -0.6
CCNL1-209	ENST00000467081	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.31	□□□□□ -0.6
CCNL1-209	ENST00000467081	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.3	□□□□□ -0.6
CCNL1-209	ENST00000467081	EPHA4	P54764	986 aa		11.3	□□□□□ -0.6
CCNL1-209	ENST00000467081	SEC13	P55735	322 aa		11.3	□□□□□ -0.6
CCNL1-209	ENST00000467081	DPYD	Q12882	1025 aa		11.3	□□□□□ -0.6
CCNL1-209	ENST00000467081	TBCEL	Q5QJ74	424 aa		11.3	□□□□□ -0.6
CCNL1-209	ENST00000467081	TSEN2	Q8NCE0	465 aa	Known RBP	11.3	□□□□□ -0.6
CCNL1-209	ENST00000467081	GPAM	Q9HCL2	828 aa		11.3	□□□□□ -0.6
CCNL1-209	ENST00000467081		A0A1B0GTH6	734 aa		11.29	□□□□□ -0.6
CCNL1-209	ENST00000467081	VSIG8	P0DPA2	414 aa		11.29	□□□□□ -0.6
CCNL1-209	ENST00000467081	GMPR	P36959	345 aa		11.29	□□□□□ -0.6
CCNL1-209	ENST00000467081	ANKMY2	Q8IV38	441 aa		11.29	□□□□□ -0.6
CCNL1-209	ENST00000467081		M0R2N6	131 aa		11.28	□□□□□ -0.6
CCNL1-209	ENST00000467081	F11	P03951	625 aa		11.28	□□□□□ -0.6
CCNL1-209	ENST00000467081	FOXK2	Q01167	660 aa		11.28	□□□□□ -0.6
CCNL1-209	ENST00000467081	SV2A	Q7L0J3	742 aa		11.28	□□□□□ -0.6
CCNL1-209	ENST00000467081	SLC9A9	Q8IVB4	645 aa		11.28	□□□□□ -0.6
CCNL1-209	ENST00000467081	NANOS1	Q8WY41	292 aa	Known RBP	11.28	□□□□□ -0.6
CCNL1-209	ENST00000467081	AIDA	Q96BJ3	306 aa		11.28	□□□□□ -0.6
CCNL1-209	ENST00000467081	ZNF295-AS1	Q8N0V1	137 aa		11.27	□□□□□ -0.61
CCNL1-209	ENST00000467081	GPR161	Q8N6U8	529 aa	Known RBP	11.27	□□□□□ -0.61
CCNL1-209	ENST00000467081	PARP3	Q9Y6F1	533 aa		11.27	□□□□□ -0.61

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