RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.211e-8■■■□□ 14.6
GTF3A-205ENST00000466776 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
GTF3A-205ENST00000466776 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
GTF3A-205ENST00000466776 GNPATO15228 680 aa16.38■□□□□ 0.21
GTF3A-205ENST00000466776 COL5A3P25940 1745 aaPredicted RBP16.37■□□□□ 0.21
GTF3A-205ENST00000466776 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
GTF3A-205ENST00000466776 PLEKHO1Q53GL0 409 aaPredicted RBP16.37■□□□□ 0.21
GTF3A-205ENST00000466776 LINC00116Q8NCU8 138 aa16.37■□□□□ 0.21
GTF3A-205ENST00000466776 PANK3Q9H999 370 aa16.37■□□□□ 0.21
GTF3A-205ENST00000466776 ASAP1Q9ULH1 1129 aa16.37■□□□□ 0.21
GTF3A-205ENST00000466776 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
GTF3A-205ENST00000466776 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
GTF3A-205ENST00000466776 DCAF5Q96JK2 942 aa16.36■□□□□ 0.21
GTF3A-205ENST00000466776 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
GTF3A-205ENST00000466776 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
GTF3A-205ENST00000466776 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
GTF3A-205ENST00000466776 ATG3Q9NT62 314 aa16.35■□□□□ 0.21
GTF3A-205ENST00000466776 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
GTF3A-205ENST00000466776 ITPK1Q13572 414 aa16.34■□□□□ 0.21
GTF3A-205ENST00000466776 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
GTF3A-205ENST00000466776 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
GTF3A-205ENST00000466776 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
GTF3A-205ENST00000466776 CABP4P57796 275 aa16.33■□□□□ 0.2
GTF3A-205ENST00000466776 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.2
GTF3A-205ENST00000466776 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
GTF3A-205ENST00000466776 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
GTF3A-205ENST00000466776 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
GTF3A-205ENST00000466776 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
GTF3A-205ENST00000466776 KDRP35968 1356 aa16.33■□□□□ 0.2
GTF3A-205ENST00000466776 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
GTF3A-205ENST00000466776 ATP10DQ9P241 1426 aa16.32■□□□□ 0.2
GTF3A-205ENST00000466776 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
GTF3A-205ENST00000466776 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
GTF3A-205ENST00000466776 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
GTF3A-205ENST00000466776 CNTNAP4Q9C0A0 1308 aa16.3■□□□□ 0.2
GTF3A-205ENST00000466776 MTHFSP49914 203 aa16.3■□□□□ 0.2
GTF3A-205ENST00000466776 RC3H1Q5TC82 1133 aaKnown RBP16.3■□□□□ 0.2
GTF3A-205ENST00000466776 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
GTF3A-205ENST00000466776 NLGN1Q8N2Q7 840 aa16.3■□□□□ 0.2
GTF3A-205ENST00000466776 GPBP1L1Q9HC44 474 aaPredicted RBP16.3■□□□□ 0.2
GTF3A-205ENST00000466776 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
GTF3A-205ENST00000466776 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
GTF3A-205ENST00000466776 MMP10P09238 476 aa16.29■□□□□ 0.2
GTF3A-205ENST00000466776 RFC4P35249 363 aa16.28■□□□□ 0.2
GTF3A-205ENST00000466776 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.2
GTF3A-205ENST00000466776 SULT6B1Q6IMI4 303 aa16.27■□□□□ 0.2
GTF3A-205ENST00000466776 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
GTF3A-205ENST00000466776 ADCY9O60503 1353 aa16.26■□□□□ 0.19
GTF3A-205ENST00000466776 TJP1Q07157 1748 aa16.26■□□□□ 0.19
GTF3A-205ENST00000466776 RPS6KA4O75676 772 aa16.26■□□□□ 0.19
GTF3A-205ENST00000466776 TGFB2P61812 414 aa16.26■□□□□ 0.19
GTF3A-205ENST00000466776 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
GTF3A-205ENST00000466776 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
GTF3A-205ENST00000466776 ARFGEF1Q9Y6D6 1849 aa16.25■□□□□ 0.19
GTF3A-205ENST00000466776 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
GTF3A-205ENST00000466776 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
GTF3A-205ENST00000466776 PARP3Q9Y6F1 533 aa16.25■□□□□ 0.19
GTF3A-205ENST00000466776 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
GTF3A-205ENST00000466776 PTCD1O75127 700 aaKnown RBP16.24■□□□□ 0.19
GTF3A-205ENST00000466776 SLC4A9Q96Q91 983 aa16.24■□□□□ 0.19
GTF3A-205ENST00000466776 C10orf71Q711Q0 1435 aa16.24■□□□□ 0.19
GTF3A-205ENST00000466776 AKAP4Q5JQC9 854 aa16.23■□□□□ 0.19
GTF3A-205ENST00000466776 NFATC2IPQ8NCF5 419 aa16.23■□□□□ 0.19
GTF3A-205ENST00000466776 GYS1P13807 737 aa16.22■□□□□ 0.19
GTF3A-205ENST00000466776 IL13P35225 146 aa16.22■□□□□ 0.19
GTF3A-205ENST00000466776 ZNF526Q8TF50 670 aaPredicted RBP16.22■□□□□ 0.19
GTF3A-205ENST00000466776 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
GTF3A-205ENST00000466776 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
GTF3A-205ENST00000466776 AMER1Q5JTC6 1135 aaPredicted RBP16.2■□□□□ 0.18
GTF3A-205ENST00000466776 MRC1P22897 1456 aa16.19■□□□□ 0.18
GTF3A-205ENST00000466776 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
GTF3A-205ENST00000466776 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
GTF3A-205ENST00000466776 FCHSD2O94868 740 aa16.18■□□□□ 0.18
GTF3A-205ENST00000466776 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
GTF3A-205ENST00000466776 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
GTF3A-205ENST00000466776 USP42Q9H9J4 1324 aaKnown RBP16.18■□□□□ 0.18
GTF3A-205ENST00000466776 ZPR1O75312 459 aa16.17■□□□□ 0.18
GTF3A-205ENST00000466776 ADAMTS7Q9UKP4 1686 aa16.17■□□□□ 0.18
GTF3A-205ENST00000466776 UBR2Q8IWV8 1755 aa16.16■□□□□ 0.18
GTF3A-205ENST00000466776 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
GTF3A-205ENST00000466776 HMOX1P09601 288 aa16.16■□□□□ 0.18
GTF3A-205ENST00000466776 DPEP1P16444 411 aa16.16■□□□□ 0.18
GTF3A-205ENST00000466776 ARHGAP27Q6ZUM4 889 aa16.16■□□□□ 0.18
GTF3A-205ENST00000466776 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
GTF3A-205ENST00000466776 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
GTF3A-205ENST00000466776 HSPA6P17066 643 aa16.15■□□□□ 0.18
GTF3A-205ENST00000466776 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
GTF3A-205ENST00000466776 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
GTF3A-205ENST00000466776 SBF1O95248 1867 aa16.14■□□□□ 0.17
GTF3A-205ENST00000466776 FKBP8Q14318 412 aa16.13■□□□□ 0.17
GTF3A-205ENST00000466776 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
GTF3A-205ENST00000466776 INTS5Q6P9B9 1019 aaKnown RBP16.13■□□□□ 0.17
GTF3A-205ENST00000466776 DNAJC10Q8IXB1 793 aa16.13■□□□□ 0.17
GTF3A-205ENST00000466776 LGR6Q9HBX8 967 aa16.13■□□□□ 0.17
GTF3A-205ENST00000466776 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
GTF3A-205ENST00000466776 DLEC1Q9Y238 1755 aa16.13■□□□□ 0.17
GTF3A-205ENST00000466776 CEP350Q5VT06 3117 aa16.12■□□□□ 0.17
GTF3A-205ENST00000466776 DALRD3Q5D0E6 543 aaKnown RBP16.12■□□□□ 0.17
GTF3A-205ENST00000466776 TTC5Q8N0Z6 440 aa16.12■□□□□ 0.17
GTF3A-205ENST00000466776 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms