RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 NT5DC4Q86YG4 428 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 ZNF687Q8N1G0 1237 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 TPCN2Q8NHX9 752 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 QTRT2Q9H974 415 aaKnown RBP4.57□□□□□ -1.68
SMC4-203ENST00000462668 ABL1P00519 1130 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 MPNDQ8N594 471 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 RASGRP4Q8TDF6 673 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 RNF34Q969K3 372 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 EMILIN1Q9Y6C2 1016 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 SBNO2Q9Y2G9 1366 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 ANKRD24Q8TF21 1146 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 PLCB3Q01970 1234 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 COX20Q5RI15 118 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 MCF2L2Q86YR7 1114 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 GPATCH3Q96I76 525 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 SAP130Q9H0E3 1048 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 AK5Q9Y6K8 562 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 SNPHO15079 494 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 MPSTP25325 297 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 RACK1P63244 317 aaKnown RBP4.56□□□□□ -1.68
SMC4-203ENST00000462668 MTMR3Q13615 1198 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 CCDC144BQ3MJ40 725 aa4.56□□□□□ -1.68
SMC4-203ENST00000462668 LDHBP07195 334 aaKnown RBP4.55□□□□□ -1.68
SMC4-203ENST00000462668 SOGA3Q5TF21 947 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 SDE2Q6IQ49 451 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMC4-203ENST00000462668 DUSP9Q99956 384 aaKnown RBP4.55□□□□□ -1.68
SMC4-203ENST00000462668 PRDM9Q9NQV7 894 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 PRKAG2Q9UGJ0 569 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 USP31Q70CQ4 1352 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 NBPF20Q3BBV1 942 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 ALG1LQ6GMV1 187 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 ERMP1Q7Z2K6 904 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 IQSEC3Q9UPP2 1182 aaPredicted RBP4.55□□□□□ -1.68
SMC4-203ENST00000462668 C16orf46Q6P387 395 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 SPACA7Q96KW9 195 aa4.55□□□□□ -1.68
SMC4-203ENST00000462668 MAMSTRQ6ZN01 415 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 ACBD3Q9H3P7 528 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 NDUFB5O43674 189 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 EIF1AXP47813 144 aaKnown RBP4.54□□□□□ -1.68
SMC4-203ENST00000462668 ST13P50502 369 aaKnown RBP4.54□□□□□ -1.68
SMC4-203ENST00000462668 ALKBH2Q6NS38 261 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 DZIP3Q86Y13 1208 aaKnown RBP4.54□□□□□ -1.68
SMC4-203ENST00000462668 ZNF511Q8NB15 262 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 C7orf43Q8WVR3 580 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 NBPF3Q9H094 633 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 OSBPL3Q9H4L5 887 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.54□□□□□ -1.68
SMC4-203ENST00000462668 GNA15P30679 374 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 WNT7BP56706 349 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 LRCH3Q96II8 777 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 CCDC87Q9NVE4 849 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.54□□□□□ -1.68
SMC4-203ENST00000462668 TSR3Q9UJK0 312 aaKnown RBP4.54□□□□□ -1.68
SMC4-203ENST00000462668 LRFN2Q9ULH4 789 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 SORBS3O60504 671 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 INHAP05111 366 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 SETDB2Q96T68 719 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 BCL11AQ9H165 835 aa4.54□□□□□ -1.68
SMC4-203ENST00000462668 A0A1W2PRU2 124 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 ANKRD62A6NC57 917 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 OXLD1Q5BKU9 147 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 NBPF6Q5VWK0 638 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 CRELD1Q96HD1 420 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 NBPF4Q96M43 638 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 KCNQ5Q9NR82 932 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 STIM2Q9P246 746 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 ATAD2Q6PL18 1390 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 TMEM87AQ8NBN3 555 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 CDK15Q96Q40 435 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 DNAJC25Q9H1X3 360 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 WWC3Q9ULE0 1092 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 ZNF76P36508 570 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 XKR5Q6UX68 686 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 ZBTB33Q86T24 672 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 FOXJ1Q92949 421 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 KCNB2Q92953 911 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 XAGE2Q96GT9 111 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 SPSB2Q99619 263 aa4.53□□□□□ -1.68
SMC4-203ENST00000462668 SCTRP47872 440 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 PSME1Q06323 249 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 PDE3BQ13370 1112 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 BPHLQ86WA6 291 aaPredicted RBP4.52□□□□□ -1.69
SMC4-203ENST00000462668 ZNF654Q8IZM8 581 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 KCNH8Q96L42 1107 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 SCHIP1Q9P0W5 487 aaPredicted RBP4.52□□□□□ -1.69
SMC4-203ENST00000462668 ADH1BP00325 375 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 C9orf131Q5VYM1 1079 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 DHX38Q92620 1227 aaKnown RBP4.52□□□□□ -1.69
SMC4-203ENST00000462668 TANGO6Q9C0B7 1094 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 HSD3B2P26439 372 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 TCEAL1Q15170 157 aa4.52□□□□□ -1.69
SMC4-203ENST00000462668 JAZF1Q86VZ6 243 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 CSRNP1Q96S65 589 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 TMA7Q9Y2S6 64 aaKnown RBP4.51□□□□□ -1.69
SMC4-203ENST00000462668 GIPC1O14908 333 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 PCDHB3Q9Y5E6 796 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 POTEMA6NI47 508 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 CDK2AP1O14519 115 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 CTHP32929 405 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 289.8 ms