RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 VIRMAQ69YN4 1812 aaKnown RBP20.68■□□□□ 0.9
TMEM220-202ENST00000455996 BTBD11A6QL63 1104 aa20.68■□□□□ 0.9
TMEM220-202ENST00000455996 HOXB7P09629 217 aa20.68■□□□□ 0.9
TMEM220-202ENST00000455996 RLBP1P12271 317 aa20.68■□□□□ 0.9
TMEM220-202ENST00000455996 TRIM27P14373 513 aa20.68■□□□□ 0.9
TMEM220-202ENST00000455996 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
TMEM220-202ENST00000455996 AAMPQ13685 434 aa20.68■□□□□ 0.9
TMEM220-202ENST00000455996 PANK1Q8TE04 598 aa20.68■□□□□ 0.9
TMEM220-202ENST00000455996 SLC52A2Q9HAB3 445 aa20.68■□□□□ 0.9
TMEM220-202ENST00000455996 NUTM2BA6NNL0 878 aaPredicted RBP20.67■□□□□ 0.9
TMEM220-202ENST00000455996 NUTM2EB1AL46 878 aaPredicted RBP20.67■□□□□ 0.9
TMEM220-202ENST00000455996 B4GALNT3Q6L9W6 998 aa20.67■□□□□ 0.9
TMEM220-202ENST00000455996 NUTM2AQ8IVF1 878 aaPredicted RBP20.67■□□□□ 0.9
TMEM220-202ENST00000455996 DZIP1LQ8IYY4 767 aaKnown RBP20.67■□□□□ 0.9
TMEM220-202ENST00000455996 HEG1Q9ULI3 1381 aa20.67■□□□□ 0.9
TMEM220-202ENST00000455996 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
TMEM220-202ENST00000455996 TNNQ9UQP3 1299 aa20.66■□□□□ 0.9
TMEM220-202ENST00000455996 THRAP3Q9Y2W1 955 aaKnown RBP20.65■□□□□ 0.9
TMEM220-202ENST00000455996 CCDC136Q96JN2 1154 aa20.64■□□□□ 0.89
TMEM220-202ENST00000455996 SPATA31A1Q5TZJ5 1347 aa20.64■□□□□ 0.89
TMEM220-202ENST00000455996 CDCA7Q9BWT1 371 aaPredicted RBP20.63■□□□□ 0.89
TMEM220-202ENST00000455996 CHMP4AQ9BY43 222 aa20.63■□□□□ 0.89
TMEM220-202ENST00000455996 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
TMEM220-202ENST00000455996 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
TMEM220-202ENST00000455996 KCNQ3O43525 872 aa20.62■□□□□ 0.89
TMEM220-202ENST00000455996 MVPQ14764 893 aaKnown RBP20.62■□□□□ 0.89
TMEM220-202ENST00000455996 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
TMEM220-202ENST00000455996 SPATA31A5Q5VU36 1347 aa20.62■□□□□ 0.89
TMEM220-202ENST00000455996 SPATA31A7Q8IWB4 1347 aa20.62■□□□□ 0.89
TMEM220-202ENST00000455996 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
TMEM220-202ENST00000455996 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
TMEM220-202ENST00000455996 API5Q9BZZ5 524 aaKnown RBP20.61■□□□□ 0.89
TMEM220-202ENST00000455996 HSPA1LP34931 641 aa20.61■□□□□ 0.89
TMEM220-202ENST00000455996 FNBP4Q8N3X1 1017 aaPredicted RBP20.61■□□□□ 0.89
TMEM220-202ENST00000455996 CLUAP1Q96AJ1 413 aa20.61■□□□□ 0.89
TMEM220-202ENST00000455996 USP35Q9P2H5 1018 aa20.61■□□□□ 0.89
TMEM220-202ENST00000455996 ABCC4O15439 1325 aa20.6■□□□□ 0.89
TMEM220-202ENST00000455996 PTPRCP08575 1304 aa20.6■□□□□ 0.89
TMEM220-202ENST00000455996 LRP6O75581 1613 aa20.6■□□□□ 0.89
TMEM220-202ENST00000455996 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
TMEM220-202ENST00000455996 UNC5CLQ8IV45 518 aa20.6■□□□□ 0.89
TMEM220-202ENST00000455996 NFATC2IPQ8NCF5 419 aa20.6■□□□□ 0.89
TMEM220-202ENST00000455996 BCL9LQ86UU0 1499 aa20.59■□□□□ 0.89
TMEM220-202ENST00000455996 ZNF790Q6PG37 636 aa20.59■□□□□ 0.89
TMEM220-202ENST00000455996 BARGINQ6ZT62 677 aa20.59■□□□□ 0.89
TMEM220-202ENST00000455996 RGS12O14924 1447 aa20.58■□□□□ 0.89
TMEM220-202ENST00000455996 TNS2Q63HR2 1409 aa20.58■□□□□ 0.89
TMEM220-202ENST00000455996 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.88
TMEM220-202ENST00000455996 SLC4A2P04920 1241 aa20.58■□□□□ 0.88
TMEM220-202ENST00000455996 CABP4P57796 275 aa20.58■□□□□ 0.88
TMEM220-202ENST00000455996 TMEM57Q8N5G2 664 aa20.57■□□□□ 0.88
TMEM220-202ENST00000455996 DDX54Q8TDD1 881 aaKnown RBP20.57■□□□□ 0.88
TMEM220-202ENST00000455996 STK31Q9BXU1 1019 aa20.57■□□□□ 0.88
TMEM220-202ENST00000455996 DDX19BQ9UMR2 479 aa20.57■□□□□ 0.88
TMEM220-202ENST00000455996 VPS72Q15906 364 aa20.56■□□□□ 0.88
TMEM220-202ENST00000455996 EXOC5O00471 708 aa20.55■□□□□ 0.88
TMEM220-202ENST00000455996 MSH5O43196 834 aa20.55■□□□□ 0.88
TMEM220-202ENST00000455996 HDGFL1Q5TGJ6 251 aa20.55■□□□□ 0.88
TMEM220-202ENST00000455996 NGLY1Q96IV0 654 aa20.55■□□□□ 0.88
TMEM220-202ENST00000455996 CACNA1FO60840 1977 aa20.54■□□□□ 0.88
TMEM220-202ENST00000455996 C8orf37Q96NL8 207 aa20.53■□□□□ 0.88
TMEM220-202ENST00000455996 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.53■□□□□ 0.88
TMEM220-202ENST00000455996 TOGARAM1Q9Y4F4 1720 aa20.53■□□□□ 0.88
TMEM220-202ENST00000455996 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
TMEM220-202ENST00000455996 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
TMEM220-202ENST00000455996 SLC39A6Q13433 755 aa20.53■□□□□ 0.88
TMEM220-202ENST00000455996 INTS3Q68E01 1043 aaKnown RBP20.53■□□□□ 0.88
TMEM220-202ENST00000455996 G2E3Q7L622 706 aa20.53■□□□□ 0.88
TMEM220-202ENST00000455996 ITPRIPQ8IWB1 547 aa20.53■□□□□ 0.88
TMEM220-202ENST00000455996 PELP1Q8IZL8 1130 aaKnown RBP20.53■□□□□ 0.88
TMEM220-202ENST00000455996 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.87
TMEM220-202ENST00000455996 GLI3P10071 1580 aa20.51■□□□□ 0.87
TMEM220-202ENST00000455996 FLIIQ13045 1269 aa20.51■□□□□ 0.87
TMEM220-202ENST00000455996 ZNF496Q96IT1 587 aaPredicted RBP20.51■□□□□ 0.87
TMEM220-202ENST00000455996 ZBTB40Q9NUA8 1239 aa20.51■□□□□ 0.87
TMEM220-202ENST00000455996 TTC5Q8N0Z6 440 aa20.5■□□□□ 0.87
TMEM220-202ENST00000455996 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
TMEM220-202ENST00000455996 ZBTB7BO15156 539 aaPredicted RBP20.49■□□□□ 0.87
TMEM220-202ENST00000455996 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
TMEM220-202ENST00000455996 CENPQQ7L2Z9 268 aaPredicted RBP20.49■□□□□ 0.87
TMEM220-202ENST00000455996 UBR2Q8IWV8 1755 aa20.49■□□□□ 0.87
TMEM220-202ENST00000455996 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
TMEM220-202ENST00000455996 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
TMEM220-202ENST00000455996 DDB1Q16531 1140 aa20.48■□□□□ 0.87
TMEM220-202ENST00000455996 NECTIN2Q92692 538 aa20.48■□□□□ 0.87
TMEM220-202ENST00000455996 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
TMEM220-202ENST00000455996 DBF4Q9UBU7 674 aaPredicted RBP20.48■□□□□ 0.87
TMEM220-202ENST00000455996 TMOD3Q9NYL9 352 aa20.47■□□□□ 0.87
TMEM220-202ENST00000455996 USP21Q9UK80 565 aa20.47■□□□□ 0.87
TMEM220-202ENST00000455996 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
TMEM220-202ENST00000455996 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
TMEM220-202ENST00000455996 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
TMEM220-202ENST00000455996 CCDC9Q9Y3X0 531 aaKnown RBP20.46■□□□□ 0.87
TMEM220-202ENST00000455996 BCL9O00512 1426 aa20.45■□□□□ 0.86
TMEM220-202ENST00000455996 DDX21Q9NR30 783 aaKnown RBP eCLIP20.45■□□□□ 0.86
TMEM220-202ENST00000455996 C5P01031 1676 aa20.45■□□□□ 0.86
TMEM220-202ENST00000455996 CCT4P50991 539 aaKnown RBP20.44■□□□□ 0.86
TMEM220-202ENST00000455996 PDIA6Q15084 440 aa20.44■□□□□ 0.86
TMEM220-202ENST00000455996 PIGBQ92521 554 aa20.44■□□□□ 0.86
TMEM220-202ENST00000455996 HYPKQ9NX55 129 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms