RNA–Protein interactions for RNA: ENST00000454786.5

UBE2F-218, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-218ENST00000454786 ATP10DQ9P241 1426 aa23.7■■□□□ 1.38
UBE2F-218ENST00000454786 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
UBE2F-218ENST00000454786 ASAP1Q9ULH1 1129 aa23.7■■□□□ 1.38
UBE2F-218ENST00000454786 MYH14Q7Z406 1995 aaKnown RBP23.7■■□□□ 1.38
UBE2F-218ENST00000454786 CICQ96RK0 1608 aaPredicted RBP23.7■■□□□ 1.38
UBE2F-218ENST00000454786 IGSF1Q8N6C5 1336 aa23.69■■□□□ 1.38
UBE2F-218ENST00000454786 KDRP35968 1356 aa23.68■■□□□ 1.38
UBE2F-218ENST00000454786 GNPATO15228 680 aa23.68■■□□□ 1.38
UBE2F-218ENST00000454786 ATP6V1AP38606 617 aa23.68■■□□□ 1.38
UBE2F-218ENST00000454786 SMIM5Q71RC9 77 aa23.68■■□□□ 1.38
UBE2F-218ENST00000454786 ITPK1Q13572 414 aa23.67■■□□□ 1.38
UBE2F-218ENST00000454786 ADCY9O60503 1353 aa23.66■■□□□ 1.38
UBE2F-218ENST00000454786 TJP1Q07157 1748 aa23.65■■□□□ 1.38
UBE2F-218ENST00000454786 ATG3Q9NT62 314 aa23.65■■□□□ 1.38
UBE2F-218ENST00000454786 CEP350Q5VT06 3117 aa23.64■■□□□ 1.38
UBE2F-218ENST00000454786 ARFGEF1Q9Y6D6 1849 aa23.63■■□□□ 1.37
UBE2F-218ENST00000454786 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
UBE2F-218ENST00000454786 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
UBE2F-218ENST00000454786 KDM6AO15550 1401 aaPredicted RBP23.62■■□□□ 1.37
UBE2F-218ENST00000454786 HSP90AB1P08238 724 aaKnown RBP23.62■■□□□ 1.37
UBE2F-218ENST00000454786 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
UBE2F-218ENST00000454786 DCAF5Q96JK2 942 aa23.61■■□□□ 1.37
UBE2F-218ENST00000454786 HSPA5P11021 654 aaKnown RBP23.6■■□□□ 1.37
UBE2F-218ENST00000454786 PANK3Q9H999 370 aa23.6■■□□□ 1.37
UBE2F-218ENST00000454786 WWC3Q9ULE0 1092 aa23.6■■□□□ 1.37
UBE2F-218ENST00000454786 PXDNLA1KZ92 1463 aa23.6■■□□□ 1.37
UBE2F-218ENST00000454786 PLEKHO1Q53GL0 409 aaPredicted RBP23.59■■□□□ 1.37
UBE2F-218ENST00000454786 RBM42Q9BTD8 480 aaKnown RBP23.59■■□□□ 1.37
UBE2F-218ENST00000454786 GPBP1L1Q9HC44 474 aaPredicted RBP23.59■■□□□ 1.37
UBE2F-218ENST00000454786 RTCBQ9Y3I0 505 aaKnown RBP23.59■■□□□ 1.37
UBE2F-218ENST00000454786 MMP10P09238 476 aa23.58■■□□□ 1.37
UBE2F-218ENST00000454786 ZNF530Q6P9A1 599 aaPredicted RBP23.58■■□□□ 1.37
UBE2F-218ENST00000454786 C10orf71Q711Q0 1435 aa23.58■■□□□ 1.36
UBE2F-218ENST00000454786 AMOTQ4VCS5 1084 aa23.57■■□□□ 1.36
UBE2F-218ENST00000454786 CNTNAP4Q9C0A0 1308 aa23.57■■□□□ 1.36
UBE2F-218ENST00000454786 TRAPPC3LQ5T215 181 aa23.56■■□□□ 1.36
UBE2F-218ENST00000454786 SLC4A9Q96Q91 983 aa23.56■■□□□ 1.36
UBE2F-218ENST00000454786 ADRA2BP18089 450 aa23.55■■□□□ 1.36
UBE2F-218ENST00000454786 MORC1Q86VD1 984 aa23.55■■□□□ 1.36
UBE2F-218ENST00000454786 ADAMTS7Q9UKP4 1686 aa23.54■■□□□ 1.36
UBE2F-218ENST00000454786 CABP4P57796 275 aa23.54■■□□□ 1.36
UBE2F-218ENST00000454786 RC3H1Q5TC82 1133 aaKnown RBP23.54■■□□□ 1.36
UBE2F-218ENST00000454786 ZNF526Q8TF50 670 aaPredicted RBP23.54■■□□□ 1.36
UBE2F-218ENST00000454786 C1orf141Q5JVX7 400 aa23.53■■□□□ 1.36
UBE2F-218ENST00000454786 NLGN1Q8N2Q7 840 aa23.53■■□□□ 1.36
UBE2F-218ENST00000454786 AEBP1Q8IUX7 1158 aa23.52■■□□□ 1.36
UBE2F-218ENST00000454786 MTHFSP49914 203 aa23.51■■□□□ 1.35
UBE2F-218ENST00000454786 ARHGEF1Q92888 912 aaKnown RBP23.51■■□□□ 1.35
UBE2F-218ENST00000454786 AFDNP55196 1824 aaKnown RBP23.5■■□□□ 1.35
UBE2F-218ENST00000454786 RPS6KA4O75676 772 aa23.5■■□□□ 1.35
UBE2F-218ENST00000454786 RFC4P35249 363 aa23.5■■□□□ 1.35
UBE2F-218ENST00000454786 TGFB2P61812 414 aa23.5■■□□□ 1.35
UBE2F-218ENST00000454786 GYS1P13807 737 aa23.49■■□□□ 1.35
UBE2F-218ENST00000454786 CCDC87Q9NVE4 849 aa23.49■■□□□ 1.35
UBE2F-218ENST00000454786 KNSTRNQ9Y448 316 aa23.49■■□□□ 1.35
UBE2F-218ENST00000454786 UBR2Q8IWV8 1755 aa23.49■■□□□ 1.35
UBE2F-218ENST00000454786 MRC1P22897 1456 aa23.49■■□□□ 1.35
UBE2F-218ENST00000454786 SBF1O95248 1867 aa23.48■■□□□ 1.35
UBE2F-218ENST00000454786 SULT6B1Q6IMI4 303 aa23.48■■□□□ 1.35
UBE2F-218ENST00000454786 DLEC1Q9Y238 1755 aa23.47■■□□□ 1.35
UBE2F-218ENST00000454786 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
UBE2F-218ENST00000454786 PARP3Q9Y6F1 533 aa23.47■■□□□ 1.35
UBE2F-218ENST00000454786 BCS1LQ9Y276 419 aa23.46■■□□□ 1.35
UBE2F-218ENST00000454786 CRKLP46109 303 aaKnown RBP23.45■■□□□ 1.34
UBE2F-218ENST00000454786 NFATC2IPQ8NCF5 419 aa23.45■■□□□ 1.34
UBE2F-218ENST00000454786 A0A0G2JLW4 131 aa23.44■■□□□ 1.34
UBE2F-218ENST00000454786 IL13P35225 146 aa23.44■■□□□ 1.34
UBE2F-218ENST00000454786 HSPA6P17066 643 aa23.43■■□□□ 1.34
UBE2F-218ENST00000454786 NRXN2Q9P2S2 1712 aa23.42■■□□□ 1.34
UBE2F-218ENST00000454786 USP42Q9H9J4 1324 aaKnown RBP23.42■■□□□ 1.34
UBE2F-218ENST00000454786 CCER1Q8TC90 406 aaPredicted RBP23.42■■□□□ 1.34
UBE2F-218ENST00000454786 SIPA1L3O60292 1781 aaPredicted RBP23.42■■□□□ 1.34
UBE2F-218ENST00000454786 DPEP1P16444 411 aa23.41■■□□□ 1.34
UBE2F-218ENST00000454786 AKAP4Q5JQC9 854 aa23.41■■□□□ 1.34
UBE2F-218ENST00000454786 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
UBE2F-218ENST00000454786 TNRC6CQ9HCJ0 1690 aaKnown RBP23.41■■□□□ 1.34
UBE2F-218ENST00000454786 CCDC88AQ3V6T2 1871 aa23.41■■□□□ 1.34
UBE2F-218ENST00000454786 KIF3CO14782 793 aa23.4■■□□□ 1.34
UBE2F-218ENST00000454786 AMER1Q5JTC6 1135 aaPredicted RBP23.4■■□□□ 1.34
UBE2F-218ENST00000454786 FCHSD2O94868 740 aa23.39■■□□□ 1.33
UBE2F-218ENST00000454786 SRP68Q9UHB9 627 aaKnown RBP23.39■■□□□ 1.33
UBE2F-218ENST00000454786 ARHGAP27Q6ZUM4 889 aa23.38■■□□□ 1.33
UBE2F-218ENST00000454786 SLC52A2Q9HAB3 445 aa23.38■■□□□ 1.33
UBE2F-218ENST00000454786 WDR90Q96KV7 1748 aa23.38■■□□□ 1.33
UBE2F-218ENST00000454786 KIF7Q2M1P5 1343 aa23.36■■□□□ 1.33
UBE2F-218ENST00000454786 FKBP8Q14318 412 aa23.36■■□□□ 1.33
UBE2F-218ENST00000454786 TIAM2Q8IVF5 1701 aa23.36■■□□□ 1.33
UBE2F-218ENST00000454786 SCN7AQ01118 1682 aa23.35■■□□□ 1.33
UBE2F-218ENST00000454786 DDR1Q08345 913 aa23.35■■□□□ 1.33
UBE2F-218ENST00000454786 HMOX1P09601 288 aa23.34■■□□□ 1.33
UBE2F-218ENST00000454786 KCNA3P22001 575 aa23.34■■□□□ 1.33
UBE2F-218ENST00000454786 INTS5Q6P9B9 1019 aaKnown RBP23.34■■□□□ 1.33
UBE2F-218ENST00000454786 DNAJC10Q8IXB1 793 aa23.34■■□□□ 1.33
UBE2F-218ENST00000454786 PIM2Q9P1W9 311 aa23.34■■□□□ 1.33
UBE2F-218ENST00000454786 SOS1Q07889 1333 aaPredicted RBP23.33■■□□□ 1.32
UBE2F-218ENST00000454786 CACNA1SQ13698 1873 aa23.32■■□□□ 1.32
UBE2F-218ENST00000454786 COL15A1P39059 1388 aa23.32■■□□□ 1.32
UBE2F-218ENST00000454786 RNMTO43148 476 aaKnown RBP23.32■■□□□ 1.32
UBE2F-218ENST00000454786 ZPR1O75312 459 aa23.32■■□□□ 1.32
UBE2F-218ENST00000454786 LGR6Q9HBX8 967 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms