RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 MPSTP25325 297 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 GRM5P41594 1212 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 GDF10P55107 478 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 MRPL58Q14197 206 aaKnown RBP6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 DSC3Q14574 896 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 EAPPQ56P03 285 aaPredicted RBP6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 ZSCAN29Q8IWY8 852 aaPredicted RBP6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 SLC4A9Q96Q91 983 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 BACH2Q9BYV9 841 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 ETNK1Q9HBU6 452 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 MAP4K5Q9Y4K4 846 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 TNFRSF10BO14763 440 aa6.69□□□□□ -1.34
HMGN3P1-201ENST00000453847 FAM13AO94988 1023 aa6.69□□□□□ -1.34
HMGN3P1-201ENST00000453847 INHAP05111 366 aa6.69□□□□□ -1.34
HMGN3P1-201ENST00000453847 FOXK2Q01167 660 aa6.69□□□□□ -1.34
HMGN3P1-201ENST00000453847 C8orf37Q96NL8 207 aa6.69□□□□□ -1.34
HMGN3P1-201ENST00000453847 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
HMGN3P1-201ENST00000453847 SERTAD1Q9UHV2 236 aa6.69□□□□□ -1.34
HMGN3P1-201ENST00000453847 TREHO43280 583 aa6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 FZD6O60353 706 aa6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 LILRA1O75019 489 aa6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 VARSP26640 1264 aaKnown RBP6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 ADD1P35611 737 aaKnown RBP6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 PTPN5P54829 565 aa6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 FMR1Q06787 632 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 TBCELQ5QJ74 424 aa6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 COX20Q5RI15 118 aa6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 CC2D2BQ6DHV5 1058 aa6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
HMGN3P1-201ENST00000453847 ZBTB39O15060 712 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 TRIM32Q13049 653 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 TSNAXIP1Q2TAA8 658 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 C16orf46Q6P387 395 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 CDK15Q96Q40 435 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 C2orf49Q9BVC5 232 aaPredicted RBP6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 CYLDQ9NQC7 956 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 LRFN2Q9ULH4 789 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 USP3Q9Y6I4 520 aa6.67□□□□□ -1.34
HMGN3P1-201ENST00000453847 RNF223E7ERA6 249 aa6.66□□□□□ -1.34
HMGN3P1-201ENST00000453847 EIF1AXP47813 144 aaKnown RBP6.66□□□□□ -1.34
HMGN3P1-201ENST00000453847 HDLBPQ00341 1268 aaKnown RBP6.66□□□□□ -1.34
HMGN3P1-201ENST00000453847 ZNF784Q8NCA9 323 aaPredicted RBP6.66□□□□□ -1.34
HMGN3P1-201ENST00000453847 CHMP7Q8WUX9 453 aaPredicted RBP6.66□□□□□ -1.34
HMGN3P1-201ENST00000453847 SETDB2Q96T68 719 aa6.66□□□□□ -1.34
HMGN3P1-201ENST00000453847 QTRT2Q9H974 415 aaKnown RBP6.66□□□□□ -1.34
HMGN3P1-201ENST00000453847 BACH1O14867 736 aa6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 MTFR1Q15390 333 aa6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 STAG2Q8N3U4 1231 aa6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 FAM161BQ96MY7 647 aa6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 SCHIP1Q9P0W5 487 aaPredicted RBP6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 WWC3Q9ULE0 1092 aa6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 HRH3Q9Y5N1 445 aa6.65□□□□□ -1.34
HMGN3P1-201ENST00000453847 SIAH2O43255 324 aa6.64□□□□□ -1.35
HMGN3P1-201ENST00000453847 PPP1R12BO60237 982 aaPredicted RBP6.64□□□□□ -1.35
HMGN3P1-201ENST00000453847 WNT7BP56706 349 aa6.64□□□□□ -1.35
HMGN3P1-201ENST00000453847 RAD51AP2Q09MP3 1159 aa6.64□□□□□ -1.35
HMGN3P1-201ENST00000453847 POTEAQ6S8J7 498 aa6.64□□□□□ -1.35
HMGN3P1-201ENST00000453847 SLC9A9Q8IVB4 645 aa6.64□□□□□ -1.35
HMGN3P1-201ENST00000453847 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
HMGN3P1-201ENST00000453847 A6NJY4 79 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 GPR182O15218 404 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 SMTNP53814 917 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 ZC3H6P61129 1189 aaKnown RBP6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 PLCB3Q01970 1234 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 EHHADHQ08426 723 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 ARID5BQ14865 1188 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 NAALADL2Q58DX5 795 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 METTL16Q86W50 562 aaKnown RBP6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 ATCAYQ86WG3 371 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 KDF1Q8NAX2 398 aaPredicted RBP6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 SREK1Q8WXA9 508 aaKnown RBP6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 XAGE2Q96GT9 111 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 DRC1Q96MC2 740 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 CITED4Q96RK1 184 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 STIM2Q9P246 746 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 IQSEC3Q9UPP2 1182 aaPredicted RBP6.63□□□□□ -1.35
HMGN3P1-201ENST00000453847 GNRH1P01148 92 aa6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 IL2RAP01589 272 aa6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 FSHRP23945 695 aa6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 PPP1R26Q5T8A7 1209 aaPredicted RBP6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 RC3H1Q5TC82 1133 aaKnown RBP6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 SH3PXD2AQ5TCZ1 1133 aa6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 ZNF295-AS1Q8N0V1 137 aa6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 EMID1Q96A84 441 aaPredicted RBP6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 DUSP9Q99956 384 aaKnown RBP6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 PARP2Q9UGN5 583 aa6.62□□□□□ -1.35
HMGN3P1-201ENST00000453847 NDUFB5O43674 189 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 LDHBP07195 334 aaKnown RBP6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 NR3C2P08235 984 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 MPNDQ8N594 471 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 ANKLE1Q8NAG6 615 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 MYO19Q96H55 970 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 PRKD2Q9BZL6 878 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 RAB6BQ9NRW1 208 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 TLL2Q9Y6L7 1015 aa6.61□□□□□ -1.35
HMGN3P1-201ENST00000453847 CDK2AP1O14519 115 aa6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 SCAMP3O14828 347 aaKnown RBP6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 ZBTB24O43167 697 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms