RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 GCC1Q96CN9 775 aa21.95■■□□□ 1.1
SMC6-206ENST00000446852 LNPKQ9C0E8 428 aa21.95■■□□□ 1.1
SMC6-206ENST00000446852 OVOS2A0A0G2JMS6 1433 aa21.94■■□□□ 1.1
SMC6-206ENST00000446852 ABCC6O95255 1503 aa21.94■■□□□ 1.1
SMC6-206ENST00000446852 MEIS3Q99687 375 aa21.94■■□□□ 1.1
SMC6-206ENST00000446852 FLIIQ13045 1269 aa21.94■■□□□ 1.1
SMC6-206ENST00000446852 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
SMC6-206ENST00000446852 RNMTO43148 476 aaKnown RBP21.93■■□□□ 1.1
SMC6-206ENST00000446852 EIF4A1P60842 406 aaKnown RBP21.93■■□□□ 1.1
SMC6-206ENST00000446852 TEFQ10587 303 aa21.93■■□□□ 1.1
SMC6-206ENST00000446852 KCNQ3O43525 872 aa21.92■■□□□ 1.1
SMC6-206ENST00000446852 CHRNA2Q15822 529 aa21.92■■□□□ 1.1
SMC6-206ENST00000446852 SLC4A10Q6U841 1118 aa21.92■■□□□ 1.1
SMC6-206ENST00000446852 NLRP2Q9NX02 1062 aa21.91■■□□□ 1.1
SMC6-206ENST00000446852 SCN11AQ9UI33 1791 aa21.91■■□□□ 1.1
SMC6-206ENST00000446852 HDGFL1Q5TGJ6 251 aa21.91■■□□□ 1.1
SMC6-206ENST00000446852 ANKRD45Q5TZF3 282 aa21.91■■□□□ 1.1
SMC6-206ENST00000446852 MEGF6O75095 1541 aa21.9■■□□□ 1.1
SMC6-206ENST00000446852 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
SMC6-206ENST00000446852 CCT4P50991 539 aaKnown RBP21.9■■□□□ 1.1
SMC6-206ENST00000446852 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
SMC6-206ENST00000446852 ANKRD44Q8N8A2 993 aa21.9■■□□□ 1.1
SMC6-206ENST00000446852 DDRGK1Q96HY6 314 aa21.9■■□□□ 1.1
SMC6-206ENST00000446852 CPDO75976 1380 aa21.9■■□□□ 1.1
SMC6-206ENST00000446852 CEP85Q6P2H3 762 aa21.89■■□□□ 1.1
SMC6-206ENST00000446852 SLAIN2Q9P270 581 aa21.89■■□□□ 1.1
SMC6-206ENST00000446852 ABCA3Q99758 1704 aa21.88■■□□□ 1.09
SMC6-206ENST00000446852 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
SMC6-206ENST00000446852 RPAP2Q8IXW5 612 aaPredicted RBP21.87■■□□□ 1.09
SMC6-206ENST00000446852 DCTPP1Q9H773 170 aa21.87■■□□□ 1.09
SMC6-206ENST00000446852 PKD1L3Q7Z443 1732 aa21.87■■□□□ 1.09
SMC6-206ENST00000446852 SOS2Q07890 1332 aaPredicted RBP21.87■■□□□ 1.09
SMC6-206ENST00000446852 PXDNLA1KZ92 1463 aa21.86■■□□□ 1.09
SMC6-206ENST00000446852 HOXB7P09629 217 aa21.86■■□□□ 1.09
SMC6-206ENST00000446852 PHAXQ9H814 394 aaKnown RBP21.86■■□□□ 1.09
SMC6-206ENST00000446852 CSB-PGBD3P0DP91 1061 aa21.85■■□□□ 1.09
SMC6-206ENST00000446852 EIF2S2P20042 333 aaKnown RBP21.85■■□□□ 1.09
SMC6-206ENST00000446852 KDM6AO15550 1401 aaPredicted RBP21.84■■□□□ 1.09
SMC6-206ENST00000446852 TATP17735 454 aaPredicted RBP21.84■■□□□ 1.09
SMC6-206ENST00000446852 NHSL1Q5SYE7 1610 aa21.83■■□□□ 1.09
SMC6-206ENST00000446852 CHPF2Q9P2E5 772 aa21.83■■□□□ 1.09
SMC6-206ENST00000446852 HEG1Q9ULI3 1381 aa21.83■■□□□ 1.09
SMC6-206ENST00000446852 PHKG2P15735 406 aa21.81■■□□□ 1.08
SMC6-206ENST00000446852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.81■■□□□ 1.086e-7■■■■□ 26
SMC6-206ENST00000446852 SPG7Q9UQ90 795 aa21.8■■□□□ 1.08
SMC6-206ENST00000446852 C5P01031 1676 aa21.8■■□□□ 1.08
SMC6-206ENST00000446852 SLC4A3P48751 1232 aa21.8■■□□□ 1.08
SMC6-206ENST00000446852 BMP2KLQ5H9B9 411 aa21.8■■□□□ 1.08
SMC6-206ENST00000446852 PLEKHG2Q9H7P9 1386 aa21.79■■□□□ 1.08
SMC6-206ENST00000446852 GIGYF1O75420 1035 aaPredicted RBP21.79■■□□□ 1.08
SMC6-206ENST00000446852 GNAI2P04899 355 aa21.79■■□□□ 1.08
SMC6-206ENST00000446852 TBC1D32Q96NH3 1257 aa21.79■■□□□ 1.08
SMC6-206ENST00000446852 ANXA1P04083 346 aa21.79■■□□□ 1.08
SMC6-206ENST00000446852 UPF2Q9HAU5 1272 aaKnown RBP21.78■■□□□ 1.08
SMC6-206ENST00000446852 PRDM11Q9NQV5 511 aa21.78■■□□□ 1.08
SMC6-206ENST00000446852 PARP4Q9UKK3 1724 aaKnown RBP21.78■■□□□ 1.08
SMC6-206ENST00000446852 PRAMEF22A3QJZ6 481 aa21.78■■□□□ 1.08
SMC6-206ENST00000446852 GNAI3P08754 354 aa21.77■■□□□ 1.08
SMC6-206ENST00000446852 CHMP4AQ9BY43 222 aa21.77■■□□□ 1.08
SMC6-206ENST00000446852 MRC1P22897 1456 aa21.77■■□□□ 1.07
SMC6-206ENST00000446852 CYP27B1O15528 508 aa21.77■■□□□ 1.07
SMC6-206ENST00000446852 SLC52A2Q9HAB3 445 aa21.77■■□□□ 1.07
SMC6-206ENST00000446852 COL5A2P05997 1499 aaPredicted RBP21.76■■□□□ 1.07
SMC6-206ENST00000446852 IFNL2Q8IZJ0 200 aa21.76■■□□□ 1.07
SMC6-206ENST00000446852 USP44Q9H0E7 712 aa21.76■■□□□ 1.07
SMC6-206ENST00000446852 PLEKHM2Q8IWE5 1019 aa21.75■■□□□ 1.07
SMC6-206ENST00000446852 HMMRO75330 724 aa21.75■■□□□ 1.07
SMC6-206ENST00000446852 WDR17Q8IZU2 1322 aa21.75■■□□□ 1.07
SMC6-206ENST00000446852 C16orf71Q8IYS4 520 aaPredicted RBP21.74■■□□□ 1.07
SMC6-206ENST00000446852 DBF4Q9UBU7 674 aaPredicted RBP21.74■■□□□ 1.07
SMC6-206ENST00000446852 ADCY9O60503 1353 aa21.74■■□□□ 1.07
SMC6-206ENST00000446852 MFAP1P55081 439 aaKnown RBP21.74■■□□□ 1.07
SMC6-206ENST00000446852 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
SMC6-206ENST00000446852 PROSER3Q2NL68 480 aa21.74■■□□□ 1.07
SMC6-206ENST00000446852 NFATC2IPQ8NCF5 419 aa21.74■■□□□ 1.07
SMC6-206ENST00000446852 PI4KAP2A4QPH2 592 aa21.73■■□□□ 1.07
SMC6-206ENST00000446852 APBB1O00213 710 aa21.73■■□□□ 1.07
SMC6-206ENST00000446852 ZNF790Q6PG37 636 aa21.73■■□□□ 1.07
SMC6-206ENST00000446852 PI4KAP1Q8N8J0 262 aa21.73■■□□□ 1.07
SMC6-206ENST00000446852 SMARCA5O60264 1052 aaPredicted RBP21.73■■□□□ 1.07
SMC6-206ENST00000446852 OTUD7AQ8TE49 926 aaPredicted RBP21.73■■□□□ 1.07
SMC6-206ENST00000446852 BCL11AQ9H165 835 aa21.73■■□□□ 1.07
SMC6-206ENST00000446852 LRRFIP2Q9Y608 721 aaKnown RBP21.73■■□□□ 1.07
SMC6-206ENST00000446852 SRCIN1Q9C0H9 1055 aa21.72■■□□□ 1.07
SMC6-206ENST00000446852 PNMA6EA0A0J9YXQ4 647 aa21.72■■□□□ 1.07
SMC6-206ENST00000446852 DNAAF4Q8WXU2 420 aa21.72■■□□□ 1.07
SMC6-206ENST00000446852 GSPT1P15170 499 aaKnown RBP21.71■■□□□ 1.07
SMC6-206ENST00000446852 DCAF5Q96JK2 942 aa21.71■■□□□ 1.07
SMC6-206ENST00000446852 BEND3Q5T5X7 828 aa21.71■■□□□ 1.07
SMC6-206ENST00000446852 DAXXQ9UER7 740 aaPredicted RBP21.71■■□□□ 1.07
SMC6-206ENST00000446852 SHANK3Q9BYB0 1731 aa21.71■■□□□ 1.07
SMC6-206ENST00000446852 UBTFL1P0CB47 393 aaPredicted RBP21.7■■□□□ 1.06
SMC6-206ENST00000446852 ATP8B2P98198 1209 aa21.7■■□□□ 1.06
SMC6-206ENST00000446852 TOM1L2Q6ZVM7 507 aa21.7■■□□□ 1.06
SMC6-206ENST00000446852 C22orf23Q9BZE7 217 aa21.69■■□□□ 1.06
SMC6-206ENST00000446852 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
SMC6-206ENST00000446852 GLI3P10071 1580 aa21.68■■□□□ 1.06
SMC6-206ENST00000446852 TTC22Q5TAA0 569 aa21.68■■□□□ 1.06
SMC6-206ENST00000446852 NBR1Q14596 966 aa21.67■■□□□ 1.06
SMC6-206ENST00000446852 PDIA6Q15084 440 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms