RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 GRXCR2A6NFK2 248 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 CBFA2T2O43439 604 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 CRTC2Q53ET0 693 aaPredicted RBP5.01□□□□□ -1.61
UBR3-206ENST00000444475 ANKRD23Q86SG2 305 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 CDC5LQ99459 802 aaKnown RBP5.01□□□□□ -1.61
UBR3-206ENST00000444475 BICRAQ9NZM4 1560 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 EXOSC10Q01780 885 aaKnown RBP5□□□□□ -1.61
UBR3-206ENST00000444475 LONRF1Q17RB8 773 aa5□□□□□ -1.61
UBR3-206ENST00000444475 INO80DQ53TQ3 878 aaPredicted RBP5□□□□□ -1.61
UBR3-206ENST00000444475 AXDND1Q5T1B0 1012 aaPredicted RBP5□□□□□ -1.61
UBR3-206ENST00000444475 EGFL6Q8IUX8 553 aa5□□□□□ -1.61
UBR3-206ENST00000444475 TMEM87AQ8NBN3 555 aa5□□□□□ -1.61
UBR3-206ENST00000444475 EPB41L3Q9Y2J2 1087 aaPredicted RBP5□□□□□ -1.61
UBR3-206ENST00000444475 MAPK1P28482 360 aa5□□□□□ -1.61
UBR3-206ENST00000444475 FMR1Q06787 632 aaKnown RBP eCLIP5□□□□□ -1.61
UBR3-206ENST00000444475 HDAC1Q13547 482 aaPredicted RBP5□□□□□ -1.61
UBR3-206ENST00000444475 SYNPO2Q9UMS6 1093 aa5□□□□□ -1.61
UBR3-206ENST00000444475 SLC45A1Q9Y2W3 748 aa5□□□□□ -1.61
UBR3-206ENST00000444475 RACK1P63244 317 aaKnown RBP5□□□□□ -1.61
UBR3-206ENST00000444475 ARID5AQ03989 594 aa5□□□□□ -1.61
UBR3-206ENST00000444475 CDC37Q16543 378 aaPredicted RBP5□□□□□ -1.61
UBR3-206ENST00000444475 KANK3Q6NY19 840 aa5□□□□□ -1.61
UBR3-206ENST00000444475 PDXDC1Q6P996 788 aa5□□□□□ -1.61
UBR3-206ENST00000444475 KIAA0907Q7Z7F0 614 aaPredicted RBP5□□□□□ -1.61
UBR3-206ENST00000444475 PPM1EQ8WY54 764 aa5□□□□□ -1.61
UBR3-206ENST00000444475 NAP1L4Q99733 375 aaKnown RBP5□□□□□ -1.61
UBR3-206ENST00000444475 DDX41Q9UJV9 622 aaKnown RBP5□□□□□ -1.61
UBR3-206ENST00000444475 PCDHB8Q9UN66 801 aa5□□□□□ -1.61
UBR3-206ENST00000444475 PCDHB13Q9Y5F0 798 aa5□□□□□ -1.61
UBR3-206ENST00000444475 SETD1BQ9UPS6 1966 aaKnown RBP4.99□□□□□ -1.61
UBR3-206ENST00000444475 K7ELQ4 463 aaPredicted RBP4.99□□□□□ -1.61
UBR3-206ENST00000444475 PTK7Q13308 1070 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 RAPGEF1Q13905 1077 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 TMC4Q7Z404 712 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 SEZ6LQ9BYH1 1024 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 TBX3O15119 743 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 IGHDP01880 384 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 ATP2B4P23634 1241 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 SAFB2Q14151 953 aaKnown RBP eCLIP4.99□□□□□ -1.61
UBR3-206ENST00000444475 PODNQ7Z5L7 613 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 RNF19AQ9NV58 838 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 CWC25Q9NXE8 425 aaPredicted RBP4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L15C9J2P7 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L10C9JJH3 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L13C9JLJ4 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L12C9JPN9 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L11C9JVI0 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L21D6R901 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L18D6R9N7 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L22D6RA61 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L17D6RBQ6 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L19D6RCP7 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L20D6RJB6 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 USP17L24Q0WX57 530 aa4.99□□□□□ -1.61
UBR3-206ENST00000444475 ACBD5Q5T8D3 534 aaPredicted RBP4.99□□□□□ -1.61
UBR3-206ENST00000444475 RSBN1LQ6PCB5 846 aaPredicted RBP4.99□□□□□ -1.61
UBR3-206ENST00000444475 TSPAN6O43657 245 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 PRMT3O60678 531 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 BPNT1O95861 308 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 SEMA3FQ13275 785 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 CCDC93Q567U6 631 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 PLEKHM2Q8IWE5 1019 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 PDILTQ8N807 584 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 LSM14AQ8ND56 463 aaKnown RBP4.98□□□□□ -1.61
UBR3-206ENST00000444475 TTC14Q96N46 770 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 KANSL2Q9H9L4 492 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 CNTN3Q9P232 1028 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 CAND2O75155 1236 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 FOSP01100 380 aaPredicted RBP4.98□□□□□ -1.61
UBR3-206ENST00000444475 DAB2P98082 770 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 MTA1Q13330 715 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 ENOX2Q16206 610 aaKnown RBP4.98□□□□□ -1.61
UBR3-206ENST00000444475 NBPF6Q5VWK0 638 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 SPIRE2Q8WWL2 714 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 NBPF4Q96M43 638 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 MPHOSPH6Q99547 160 aaKnown RBP4.98□□□□□ -1.61
UBR3-206ENST00000444475 LGR6Q9HBX8 967 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 H3BRB1 525 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 DIXDC1Q155Q3 683 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 NBPF9Q3BBW0 867 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 CHPFQ8IZ52 775 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 RSPH1Q8WYR4 309 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 MRFAP1L1Q96HT8 127 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 FAM161BQ96MY7 647 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 CARD10Q9BWT7 1032 aa4.98□□□□□ -1.61
UBR3-206ENST00000444475 TUT1Q9H6E5 874 aaKnown RBP4.98□□□□□ -1.61
UBR3-206ENST00000444475 RNASEH2AO75792 299 aaKnown RBP4.97□□□□□ -1.61
UBR3-206ENST00000444475 GJA5P36382 358 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 USP5P45974 858 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 CDKN1CP49918 316 aaPredicted RBP4.97□□□□□ -1.61
UBR3-206ENST00000444475 OCLNQ16625 522 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 PGBD3Q8N328 593 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 CLIC5Q9NZA1 410 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 MYO15BQ96JP2 1530 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 SYNRGQ9UMZ2 1314 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 AP1G2O75843 785 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 GNL2Q13823 731 aaKnown RBP4.97□□□□□ -1.61
UBR3-206ENST00000444475 ALDH1L2Q3SY69 923 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 NFATC2IPQ8NCF5 419 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 C21orf2O43822 256 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms