RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 HRH3Q9Y5N1 445 aa8.95□□□□□ -0.98
AC003001.1-201ENST00000443247 TMEM229AB2RXF0 380 aa8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 LMOD1P29536 600 aaPredicted RBP8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 ATP1A2P50993 1020 aa8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 CLDN10P78369 228 aa8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 TLR1Q15399 786 aa8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 FHDC1Q9C0D6 1143 aaPredicted RBP8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 SERTAD1Q9UHV2 236 aa8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 KIAA1024Q9UPX6 916 aa8.94□□□□□ -0.98
AC003001.1-201ENST00000443247 WASLO00401 505 aaPredicted RBP8.93□□□□□ -0.98
AC003001.1-201ENST00000443247 CFAP70Q5T0N1 1121 aa8.93□□□□□ -0.98
AC003001.1-201ENST00000443247 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
AC003001.1-201ENST00000443247 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
AC003001.1-201ENST00000443247 SENP3-EIF4A1A0A087X0R7 540 aa8.92□□□□□ -0.98
AC003001.1-201ENST00000443247 POU4F2Q12837 409 aa8.92□□□□□ -0.98
AC003001.1-201ENST00000443247 TPCN2Q8NHX9 752 aa8.92□□□□□ -0.98
AC003001.1-201ENST00000443247 NANOS1Q8WY41 292 aaKnown RBP8.92□□□□□ -0.98
AC003001.1-201ENST00000443247 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
AC003001.1-201ENST00000443247 ITGA6P23229 1130 aa8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 TMEM214Q6NUQ4 689 aaKnown RBP8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 ZNF358Q9NW07 568 aa8.91□□□□□ -0.98
AC003001.1-201ENST00000443247 SPATA31C2B4DYI2 1134 aa8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 ZBTB7BO15156 539 aaPredicted RBP8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 RASA1P20936 1047 aa8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 RFX1P22670 979 aa8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 SMTNP53814 917 aa8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 TAS1R3Q7RTX0 852 aa8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
AC003001.1-201ENST00000443247 GNASQ5JWF2 1037 aa8.89□□□□□ -0.99
AC003001.1-201ENST00000443247 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
AC003001.1-201ENST00000443247 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
AC003001.1-201ENST00000443247 SLC4A9Q96Q91 983 aa8.89□□□□□ -0.99
AC003001.1-201ENST00000443247 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
AC003001.1-201ENST00000443247 BACH1O14867 736 aa8.88□□□□□ -0.99
AC003001.1-201ENST00000443247 PHKA2P46019 1235 aa8.88□□□□□ -0.99
AC003001.1-201ENST00000443247 KRT76Q01546 638 aa8.88□□□□□ -0.99
AC003001.1-201ENST00000443247 CRTC2Q53ET0 693 aaPredicted RBP8.88□□□□□ -0.99
AC003001.1-201ENST00000443247 SIX5Q8N196 739 aa8.88□□□□□ -0.99
AC003001.1-201ENST00000443247 GPR161Q8N6U8 529 aaKnown RBP8.88□□□□□ -0.99
AC003001.1-201ENST00000443247 VRTNQ9H8Y1 702 aa8.88□□□□□ -0.99
AC003001.1-201ENST00000443247 A6NJY4 79 aa8.87□□□□□ -0.99
AC003001.1-201ENST00000443247 C4orf17Q53FE4 359 aa8.87□□□□□ -0.99
AC003001.1-201ENST00000443247 LARP1Q6PKG0 1096 aaKnown RBP8.87□□□□□ -0.99
AC003001.1-201ENST00000443247 SV2AQ7L0J3 742 aa8.87□□□□□ -0.99
AC003001.1-201ENST00000443247 PPARGC1BQ86YN6 1023 aaKnown RBP8.87□□□□□ -0.99
AC003001.1-201ENST00000443247 VWA5B2Q8N398 1253 aa8.87□□□□□ -0.99
AC003001.1-201ENST00000443247 C1orf115Q9H7X2 142 aa8.87□□□□□ -0.99
AC003001.1-201ENST00000443247 CDC14CA4D256 554 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 SFI1A8K8P3 1242 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L10C9JJH3 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L12C9JPN9 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L21D6R901 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 MTFR1Q15390 333 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 CDCA8Q53HL2 280 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 WDR44Q5JSH3 913 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 CCDC82Q8N4S0 544 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 RHBDD1Q8TEB9 315 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 SERPINA10Q9UK55 444 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 DYRK1BQ9Y463 629 aa8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 RBM19Q9Y4C8 960 aaKnown RBP8.86□□□□□ -0.99
AC003001.1-201ENST00000443247 FAM196BA6NMK8 535 aa8.85□□□□□ -0.99
AC003001.1-201ENST00000443247 DKK1O94907 266 aa8.85□□□□□ -0.99
AC003001.1-201ENST00000443247 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
AC003001.1-201ENST00000443247 GSK3AP49840 483 aa8.85□□□□□ -0.99
AC003001.1-201ENST00000443247 PTK7Q13308 1070 aa8.85□□□□□ -0.99
AC003001.1-201ENST00000443247 GAS2L1Q99501 681 aaPredicted RBP8.85□□□□□ -0.99
AC003001.1-201ENST00000443247 USP3Q9Y6I4 520 aa8.85□□□□□ -0.99
AC003001.1-201ENST00000443247 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.84□□□□□ -0.99
AC003001.1-201ENST00000443247 RIPOR1Q6ZS17 1223 aa8.84□□□□□ -0.99
AC003001.1-201ENST00000443247 TNS4Q8IZW8 715 aa8.84□□□□□ -0.99
AC003001.1-201ENST00000443247 IQSEC3Q9UPP2 1182 aaPredicted RBP8.84□□□□□ -0.99
AC003001.1-201ENST00000443247 CDK2AP1O14519 115 aa8.83□□□□□ -1
AC003001.1-201ENST00000443247 EPHA4P54764 986 aa8.83□□□□□ -1
AC003001.1-201ENST00000443247 DPYDQ12882 1025 aa8.83□□□□□ -1
AC003001.1-201ENST00000443247 TSEN2Q8NCE0 465 aaKnown RBP8.83□□□□□ -1
AC003001.1-201ENST00000443247 GMCL1Q96IK5 515 aa8.83□□□□□ -1
AC003001.1-201ENST00000443247 COL25A1Q9BXS0 654 aaPredicted RBP8.83□□□□□ -1
AC003001.1-201ENST00000443247 NIFKQ9BYG3 293 aaKnown RBP8.83□□□□□ -1
AC003001.1-201ENST00000443247 CUEDC1Q9NWM3 386 aaPredicted RBP8.83□□□□□ -1
AC003001.1-201ENST00000443247 SCHIP1Q9P0W5 487 aaPredicted RBP8.83□□□□□ -1
AC003001.1-201ENST00000443247 SEC13P55735 322 aa8.82□□□□□ -1
AC003001.1-201ENST00000443247 KCNMA1Q12791 1236 aa8.82□□□□□ -1
AC003001.1-201ENST00000443247 TBCELQ5QJ74 424 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms