RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 M0R2N6 131 aa9.18□□□□□ -0.94
PFDN4-202ENST00000441080 BMP1P13497 986 aa9.18□□□□□ -0.94
PFDN4-202ENST00000441080 MRPL14Q6P1L8 145 aaKnown RBP9.18□□□□□ -0.94
PFDN4-202ENST00000441080 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
PFDN4-202ENST00000441080 XAGE2Q96GT9 111 aa9.18□□□□□ -0.94
PFDN4-202ENST00000441080 NLRP3Q96P20 1036 aa9.18□□□□□ -0.94
PFDN4-202ENST00000441080 ESYT1Q9BSJ8 1104 aa9.18□□□□□ -0.94
PFDN4-202ENST00000441080 CARNS1A5YM72 827 aa9.17□□□□□ -0.94
PFDN4-202ENST00000441080 BMP2P12643 396 aa9.17□□□□□ -0.94
PFDN4-202ENST00000441080 SCARF1Q14162 830 aa9.17□□□□□ -0.94
PFDN4-202ENST00000441080 SWI5Q1ZZU3 235 aa9.17□□□□□ -0.94
PFDN4-202ENST00000441080 C6orf118Q5T5N4 469 aa9.17□□□□□ -0.94
PFDN4-202ENST00000441080 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
PFDN4-202ENST00000441080 ST8SIA5O15466 376 aa9.16□□□□□ -0.94
PFDN4-202ENST00000441080 SPINT1O43278 529 aa9.16□□□□□ -0.94
PFDN4-202ENST00000441080 PDIA4P13667 645 aaKnown RBP9.16□□□□□ -0.94
PFDN4-202ENST00000441080 TLR1Q15399 786 aa9.16□□□□□ -0.94
PFDN4-202ENST00000441080 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
PFDN4-202ENST00000441080 HINFPQ9BQA5 517 aa9.16□□□□□ -0.94
PFDN4-202ENST00000441080 FAM69CQ0P6D2 419 aa9.15□□□□□ -0.94
PFDN4-202ENST00000441080 TRIM46Q7Z4K8 759 aa9.15□□□□□ -0.94
PFDN4-202ENST00000441080 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
PFDN4-202ENST00000441080 PURBQ96QR8 312 aaKnown RBP9.15□□□□□ -0.94
PFDN4-202ENST00000441080 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
PFDN4-202ENST00000441080 AAASQ9NRG9 546 aa9.15□□□□□ -0.94
PFDN4-202ENST00000441080 A6NJY4 79 aa9.14□□□□□ -0.95
PFDN4-202ENST00000441080 SMTNP53814 917 aa9.14□□□□□ -0.95
PFDN4-202ENST00000441080 TNS4Q8IZW8 715 aa9.14□□□□□ -0.95
PFDN4-202ENST00000441080 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
PFDN4-202ENST00000441080 HRH3Q9Y5N1 445 aa9.14□□□□□ -0.95
PFDN4-202ENST00000441080 LGR5O75473 907 aa9.13□□□□□ -0.95
PFDN4-202ENST00000441080 CENPCQ03188 943 aa9.13□□□□□ -0.95
PFDN4-202ENST00000441080 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
PFDN4-202ENST00000441080 PRMT3O60678 531 aa9.12□□□□□ -0.95
PFDN4-202ENST00000441080 GPC1P35052 558 aa9.12□□□□□ -0.95
PFDN4-202ENST00000441080 CTSOP43234 321 aaPredicted RBP9.12□□□□□ -0.95
PFDN4-202ENST00000441080 EPHA4P54764 986 aa9.12□□□□□ -0.95
PFDN4-202ENST00000441080 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
PFDN4-202ENST00000441080 Q6ZNB5 142 aa9.12□□□□□ -0.95
PFDN4-202ENST00000441080 FHDC1Q9C0D6 1143 aaPredicted RBP9.12□□□□□ -0.95
PFDN4-202ENST00000441080 ATP13A2Q9NQ11 1180 aa9.12□□□□□ -0.95
PFDN4-202ENST00000441080 RNF144AP50876 292 aaPredicted RBP9.11□□□□□ -0.95
PFDN4-202ENST00000441080 MTFR1Q15390 333 aa9.11□□□□□ -0.95
PFDN4-202ENST00000441080 ZFP42Q96MM3 310 aa9.11□□□□□ -0.95
PFDN4-202ENST00000441080 ZSCAN10Q96SZ4 725 aaPredicted RBP9.11□□□□□ -0.95
PFDN4-202ENST00000441080 SCHIP1Q9P0W5 487 aaPredicted RBP9.11□□□□□ -0.95
PFDN4-202ENST00000441080 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
PFDN4-202ENST00000441080 FOXD4L5Q5VV16 416 aaPredicted RBP9.1□□□□□ -0.95
PFDN4-202ENST00000441080 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
PFDN4-202ENST00000441080 PRIMPOLQ96LW4 560 aa9.1□□□□□ -0.95
PFDN4-202ENST00000441080 TSPAN10Q9H1Z9 355 aaPredicted RBP9.1□□□□□ -0.95
PFDN4-202ENST00000441080 SLAIN2Q9P270 581 aa9.1□□□□□ -0.95
PFDN4-202ENST00000441080 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
PFDN4-202ENST00000441080 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
PFDN4-202ENST00000441080 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
PFDN4-202ENST00000441080 ATP2B4P23634 1241 aa9.09□□□□□ -0.95
PFDN4-202ENST00000441080 FOXK2Q01167 660 aa9.09□□□□□ -0.95
PFDN4-202ENST00000441080 B4GALNT3Q6L9W6 998 aa9.09□□□□□ -0.95
PFDN4-202ENST00000441080 TMEM214Q6NUQ4 689 aaKnown RBP9.09□□□□□ -0.95
PFDN4-202ENST00000441080 SLC9A9Q8IVB4 645 aa9.09□□□□□ -0.95
PFDN4-202ENST00000441080 GRIP2Q9C0E4 1043 aa9.09□□□□□ -0.95
PFDN4-202ENST00000441080 WEE1P30291 646 aa9.08□□□□□ -0.96
PFDN4-202ENST00000441080 TBCELQ5QJ74 424 aa9.08□□□□□ -0.96
PFDN4-202ENST00000441080 RNF217Q8TC41 542 aa9.08□□□□□ -0.96
PFDN4-202ENST00000441080 SCG3Q8WXD2 468 aaKnown RBP9.08□□□□□ -0.96
PFDN4-202ENST00000441080 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
PFDN4-202ENST00000441080 SOS2Q07890 1332 aaPredicted RBP9.07□□□□□ -0.96
PFDN4-202ENST00000441080 IGFBP4P22692 258 aa9.07□□□□□ -0.96
PFDN4-202ENST00000441080 OCLNQ16625 522 aa9.07□□□□□ -0.96
PFDN4-202ENST00000441080 GNASQ5JWF2 1037 aa9.07□□□□□ -0.96
PFDN4-202ENST00000441080 PPARGC1BQ86YN6 1023 aaKnown RBP9.07□□□□□ -0.96
PFDN4-202ENST00000441080 USP3Q9Y6I4 520 aa9.07□□□□□ -0.96
PFDN4-202ENST00000441080 PPP1R12BO60237 982 aaPredicted RBP9.06□□□□□ -0.96
PFDN4-202ENST00000441080 GAS2L2Q8NHY3 880 aa9.06□□□□□ -0.96
PFDN4-202ENST00000441080 CHMP7Q8WUX9 453 aaPredicted RBP9.06□□□□□ -0.96
PFDN4-202ENST00000441080 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
PFDN4-202ENST00000441080 ATAD2Q6PL18 1390 aa9.06□□□□□ -0.96
PFDN4-202ENST00000441080 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 C21orf2O43822 256 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 BRD1O95696 1058 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 SSFA2P28290 1259 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 PSMA6P60900 246 aaKnown RBP9.05□□□□□ -0.96
PFDN4-202ENST00000441080 LYSMD3Q7Z3D4 306 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 PRICKLE2Q7Z3G6 844 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 RHBDD1Q8TEB9 315 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
PFDN4-202ENST00000441080 FOXO3O43524 673 aa9.04□□□□□ -0.96
PFDN4-202ENST00000441080 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
PFDN4-202ENST00000441080 SENP2Q9HC62 589 aa9.04□□□□□ -0.96
PFDN4-202ENST00000441080 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 MAN1A2O60476 641 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
PFDN4-202ENST00000441080 C4orf17Q53FE4 359 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 TAS1R3Q7RTX0 852 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 KIFC2Q96AC6 838 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 VTI1AQ96AJ9 217 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 ZNF232Q9UNY5 417 aa9.03□□□□□ -0.96
PFDN4-202ENST00000441080 PLA2G4AP47712 749 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms