RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 GTF2E1P29083 439 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P12-201ENST00000438594 SCTRP47872 440 aa6.27□□□□□ -1.41
HMGB1P12-201ENST00000438594 TRIM34Q9BYJ4 488 aa6.27□□□□□ -1.41
HMGB1P12-201ENST00000438594 PHF24Q9UPV7 400 aa6.27□□□□□ -1.41
HMGB1P12-201ENST00000438594 SPATA31C2B4DYI2 1134 aa6.26□□□□□ -1.41
HMGB1P12-201ENST00000438594 CCDC125Q86Z20 511 aa6.26□□□□□ -1.41
HMGB1P12-201ENST00000438594 KLRG1Q96E93 195 aa6.26□□□□□ -1.41
HMGB1P12-201ENST00000438594 LRRC4BQ9NT99 713 aa6.26□□□□□ -1.41
HMGB1P12-201ENST00000438594 CSB-PGBD3P0DP91 1061 aa6.25□□□□□ -1.41
HMGB1P12-201ENST00000438594 WDR44Q5JSH3 913 aa6.25□□□□□ -1.41
HMGB1P12-201ENST00000438594 PGBD3Q8N328 593 aa6.25□□□□□ -1.41
HMGB1P12-201ENST00000438594 EDARADDQ8WWZ3 215 aa6.25□□□□□ -1.41
HMGB1P12-201ENST00000438594 CFHR5Q9BXR6 569 aa6.25□□□□□ -1.41
HMGB1P12-201ENST00000438594 BMP4P12644 408 aa6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 GNASQ5JWF2 1037 aa6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 TMEM214Q6NUQ4 689 aaKnown RBP6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 C1orf229Q6ZS94 237 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 CNKSR1Q969H4 720 aa6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 PCMTD1Q96MG8 357 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 ZSCAN10Q96SZ4 725 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 OSBPL3Q9H4L5 887 aa6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 RUBCNLQ9H714 662 aa6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 GDF2Q9UK05 429 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 ZNF330Q9Y3S2 320 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P12-201ENST00000438594 COL8A1P27658 744 aa6.23□□□□□ -1.41
HMGB1P12-201ENST00000438594 CENPCQ03188 943 aa6.23□□□□□ -1.41
HMGB1P12-201ENST00000438594 TMEM259Q4ZIN3 620 aa6.23□□□□□ -1.41
HMGB1P12-201ENST00000438594 NPM2Q86SE8 214 aaKnown RBP6.23□□□□□ -1.41
HMGB1P12-201ENST00000438594 Q8N3U1 123 aa6.23□□□□□ -1.41
HMGB1P12-201ENST00000438594 GOLGA6L1Q8N7Z2 621 aa6.23□□□□□ -1.41
HMGB1P12-201ENST00000438594 A0A1B0GTH6 734 aa6.22□□□□□ -1.41
HMGB1P12-201ENST00000438594 MYCP01106 439 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P12-201ENST00000438594 THBS1P07996 1170 aa6.22□□□□□ -1.41
HMGB1P12-201ENST00000438594 NR1H3Q13133 447 aa6.22□□□□□ -1.41
HMGB1P12-201ENST00000438594 ZNF592Q92610 1267 aa6.22□□□□□ -1.41
HMGB1P12-201ENST00000438594 ESYT1Q9BSJ8 1104 aa6.22□□□□□ -1.41
HMGB1P12-201ENST00000438594 SUV39H2Q9H5I1 410 aa6.22□□□□□ -1.41
HMGB1P12-201ENST00000438594 TRAK2O60296 914 aa6.21□□□□□ -1.42
HMGB1P12-201ENST00000438594 GNRH1P01148 92 aa6.21□□□□□ -1.42
HMGB1P12-201ENST00000438594 IL2RAP01589 272 aa6.21□□□□□ -1.42
HMGB1P12-201ENST00000438594 MCCD1P59942 119 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P12-201ENST00000438594 EFHC2Q5JST6 749 aa6.21□□□□□ -1.42
HMGB1P12-201ENST00000438594 ALYREFQ86V81 257 aaKnown RBP6.21□□□□□ -1.42
HMGB1P12-201ENST00000438594 ABHD17AQ96GS6 310 aa6.21□□□□□ -1.42
HMGB1P12-201ENST00000438594 PIK3R2O00459 728 aa6.2□□□□□ -1.42
HMGB1P12-201ENST00000438594 FGFR3P22607 806 aa6.2□□□□□ -1.42
HMGB1P12-201ENST00000438594 MSX1P28360 303 aa6.2□□□□□ -1.42
HMGB1P12-201ENST00000438594 GGA1Q9UJY5 639 aa6.2□□□□□ -1.42
HMGB1P12-201ENST00000438594 C4orf17Q53FE4 359 aa6.19□□□□□ -1.42
HMGB1P12-201ENST00000438594 GJD4Q96KN9 370 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P12-201ENST00000438594 ATXN7L1Q9ULK2 861 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P12-201ENST00000438594 C1QTNF9BB2RNN3 333 aa6.18□□□□□ -1.42
HMGB1P12-201ENST00000438594 GNB5O14775 395 aa6.18□□□□□ -1.42
HMGB1P12-201ENST00000438594 CTBSQ01459 385 aa6.18□□□□□ -1.42
HMGB1P12-201ENST00000438594 NEURL1BA8MQ27 555 aa6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 C2CD2LO14523 706 aa6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 LBRQ14739 615 aaKnown RBP6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 ESCO1Q5FWF5 840 aa6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 LINC00114Q6XXX2 140 aa6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 SLCO4C1Q6ZQN7 724 aa6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 BTBD6Q96KE9 485 aa6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 CDCA7Q9BWT1 371 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P12-201ENST00000438594 SUPT5HO00267 1087 aaKnown RBP6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 BNIP3LO60238 219 aa6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 PLA2G4AP47712 749 aa6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 TRIM26Q12899 539 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 DOC2BQ14184 412 aa6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 CD163Q86VB7 1156 aa6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 XAGE2Q96GT9 111 aa6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 SEMA6BQ9H3T3 888 aa6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 NOP53Q9NZM5 478 aaKnown RBP6.16□□□□□ -1.42
HMGB1P12-201ENST00000438594 STAU1O95793 577 aaKnown RBP6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 CHRNA4P43681 627 aa6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 UBAP2LQ14157 1087 aaKnown RBP6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 TLR1Q15399 786 aa6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 TBC1D9Q6ZT07 1266 aa6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 RNF135Q8IUD6 432 aa6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 RHBDD1Q8TEB9 315 aa6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 AIDAQ96BJ3 306 aa6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 CCDC85AQ96PX6 553 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 FHDC1Q9C0D6 1143 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P12-201ENST00000438594 EPXP11678 715 aa6.14□□□□□ -1.43
HMGB1P12-201ENST00000438594 FIGNL1Q6PIW4 674 aa6.14□□□□□ -1.43
HMGB1P12-201ENST00000438594 IL27Q8NEV9 243 aa6.14□□□□□ -1.43
HMGB1P12-201ENST00000438594 CEP126Q9P2H0 1117 aa6.14□□□□□ -1.43
HMGB1P12-201ENST00000438594 NDUFB9Q9Y6M9 179 aa6.14□□□□□ -1.43
HMGB1P12-201ENST00000438594 ARAFP10398 606 aa6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 HOXB4P17483 251 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 OXLD1Q5BKU9 147 aa6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 CHSY3Q70JA7 882 aa6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 PSMG3-AS1Q96PY0 264 aa6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 DOLKQ9UPQ8 538 aa6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 HRH3Q9Y5N1 445 aa6.13□□□□□ -1.43
HMGB1P12-201ENST00000438594 DCDC2BA2VCK2 349 aa6.12□□□□□ -1.43
HMGB1P12-201ENST00000438594 DGKGP49619 791 aa6.12□□□□□ -1.43
HMGB1P12-201ENST00000438594 ZMYM1Q5SVZ6 1142 aa6.12□□□□□ -1.43
HMGB1P12-201ENST00000438594 ZCCHC2Q9C0B9 1178 aaKnown RBP6.12□□□□□ -1.43
HMGB1P12-201ENST00000438594 GOPCQ9HD26 462 aa6.12□□□□□ -1.43
HMGB1P12-201ENST00000438594 NDFIP2Q9NV92 336 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms