RNA–Protein interactions for RNA: ENST00000435991.2

TRAPPC13P1-201, Transcript of trafficking protein particle complex 13 pseudogene 1, humanhuman

BASIC

Gene TRAPPC13P1, Length 1,062 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13P1-201ENST00000435991 SCARF2Q96GP6 870 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 ENAMQ9NRM1 1142 aa9.76□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 A0A1B0GTH6 734 aa9.75□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 VAC14Q08AM6 782 aa9.75□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 SIRT1Q96EB6 747 aa9.75□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 GNASQ5JWF2 1037 aa9.74□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 THBS1P07996 1170 aa9.73□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 IRS1P35568 1242 aa9.73□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 LBRQ14739 615 aaKnown RBP9.73□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 CFHR5Q9BXR6 569 aa9.73□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 ETNK1Q9HBU6 452 aa9.73□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 BCRP11274 1271 aa9.72□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 MX2P20592 715 aa9.72□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 PHKA2P46019 1235 aa9.72□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 C4orf17Q53FE4 359 aa9.72□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 TMEM214Q6NUQ4 689 aaKnown RBP9.72□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 ACDQ96AP0 544 aa9.72□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
TRAPPC13P1-201ENST00000435991 SOX11P35716 441 aa9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 ABL2P42684 1182 aa9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 MCM6Q14566 821 aa9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 MAP7D1Q3KQU3 841 aa9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 OXLD1Q5BKU9 147 aa9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 PPARGC1BQ86YN6 1023 aaKnown RBP9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 RHBDD1Q8TEB9 315 aa9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 DNMT3AQ9Y6K1 912 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 MAP2K3P46734 347 aa9.69□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 UBAP2LQ14157 1087 aaKnown RBP9.69□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 TLR1Q15399 786 aa9.69□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 ARXQ96QS3 562 aa9.69□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 PHF24Q9UPV7 400 aa9.69□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 STAU1O95793 577 aaKnown RBP9.68□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 SCNN1DP51172 638 aa9.68□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 PLPP7Q8NBV4 271 aa9.68□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 INHAP05111 366 aa9.67□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 MSX1P28360 303 aa9.67□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 PGBD3Q8N328 593 aa9.67□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 PHF20L1A8MW92 1017 aa9.66□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 OIP5O43482 229 aa9.66□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 GDF10P55107 478 aa9.66□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 C14orf37Q86TY3 774 aa9.66□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 CRISPLD1Q9H336 500 aa9.66□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 RUBCNLQ9H714 662 aa9.66□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 FOXK2Q01167 660 aa9.65□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 EFHC2Q5JST6 749 aa9.65□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 NEDD1Q8NHV4 660 aa9.65□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 OXCT2Q9BYC2 517 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC13P1-201ENST00000435991 IGHA1P01876 353 aa9.64□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 BEND7Q8N7W2 519 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 COG6Q9Y2V7 657 aa9.64□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 CNTNAP5Q8WYK1 1306 aa9.63□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 PODNQ7Z5L7 613 aa9.63□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 C1orf216Q8TAB5 229 aa9.63□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 KLRG1Q96E93 195 aa9.63□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 NDFIP2Q9NV92 336 aa9.63□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 PLA2G4AP47712 749 aa9.62□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 SMTNP53814 917 aa9.62□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 TBC1D9Q6ZT07 1266 aa9.62□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 SUZ12Q15022 739 aaKnown RBP9.61□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 SLC4A9Q96Q91 983 aa9.61□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 GDF2Q9UK05 429 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 MTFR1Q15390 333 aa9.6□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 GPAT2Q6NUI2 795 aa9.6□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 BNIP3LO60238 219 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 LZTS3O60299 673 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 ATP4AP20648 1035 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 FGFR3P22607 806 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 FIGNL1Q6PIW4 674 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 GOLGA6L1Q8N7Z2 621 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 ABHD17AQ96GS6 310 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 ALG2Q9H553 416 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 DNAAF2Q9NVR5 837 aaKnown RBP9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 PCDHGA11Q9Y5H2 935 aa9.59□□□□□ -0.87
TRAPPC13P1-201ENST00000435991 LOC100996750A0A140TA64 210 aa9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 CDK2AP1O14519 115 aa9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 C1orf229Q6ZS94 237 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 NLRP8Q86W28 1048 aa9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 NFATC2IPQ8NCF5 419 aa9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 KRTAP4-6Q9BYQ5 205 aa9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 IQSEC3Q9UPP2 1182 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 A6NJY4 79 aa9.57□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 SHISA8B8ZZ34 492 aa9.57□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 C2CD2LO14523 706 aa9.57□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 BMP4P12644 408 aa9.57□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 EML3Q32P44 896 aa9.57□□□□□ -0.88
TRAPPC13P1-201ENST00000435991 WWC1Q8IX03 1113 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms