RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 ZNF428Q96B54 188 aa11.77□□□□□ -0.53
TNS3-204ENST00000428457 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.53
TNS3-204ENST00000428457 CCT4P50991 539 aaKnown RBP11.77□□□□□ -0.53
TNS3-204ENST00000428457 DNAJC2Q99543 621 aaKnown RBP11.77□□□□□ -0.53
TNS3-204ENST00000428457 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.53
TNS3-204ENST00000428457 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
TNS3-204ENST00000428457 ZNF396Q96N95 335 aaPredicted RBP11.77□□□□□ -0.53
TNS3-204ENST00000428457 GNAT3A8MTJ3 354 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 FCHSD2O94868 740 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 TNNT1P13805 278 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.53
TNS3-204ENST00000428457 CCDC57Q2TAC2 916 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
TNS3-204ENST00000428457 DEF6Q9H4E7 631 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 ABCC2Q92887 1545 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 JAKMIP1Q96N16 626 aaKnown RBP11.76□□□□□ -0.53
TNS3-204ENST00000428457 IL1RAPL2Q9NP60 686 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
TNS3-204ENST00000428457 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
TNS3-204ENST00000428457 TRMT1Q9NXH9 659 aaKnown RBP11.76□□□□□ -0.53
TNS3-204ENST00000428457 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
TNS3-204ENST00000428457 ADCY5O95622 1261 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 TTC39AQ5SRH9 613 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 CCDC183Q5T5S1 534 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 DUSP27Q5VZP5 1158 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 CEP57L1Q8IYX8 460 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 ERLIN1O75477 346 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 KIAA0754O94854 1291 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 ZSCAN23Q3MJ62 389 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 BBXQ8WY36 941 aaPredicted RBP11.75□□□□□ -0.53
TNS3-204ENST00000428457 C8orf34Q49A92 452 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 CWC27Q6UX04 472 aaKnown RBP11.75□□□□□ -0.53
TNS3-204ENST00000428457 LRRC59Q96AG4 307 aaKnown RBP11.75□□□□□ -0.53
TNS3-204ENST00000428457 IGSF3O75054 1194 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 PDRG1Q9NUG6 133 aa11.75□□□□□ -0.53
TNS3-204ENST00000428457 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
TNS3-204ENST00000428457 SMARCC1Q92922 1105 aaPredicted RBP11.74□□□□□ -0.53
TNS3-204ENST00000428457 SMARCE1Q969G3 411 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 FILIP1LQ4L180 1135 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 CALCOCO1Q9P1Z2 691 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 TTC21BQ7Z4L5 1316 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 DCTN1Q14203 1278 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 SSH1Q8WYL5 1049 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 RBM5P52756 815 aaKnown RBP eCLIP11.74□□□□□ -0.53
TNS3-204ENST00000428457 WAPLQ7Z5K2 1190 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 EXOC6BQ9Y2D4 811 aa11.74□□□□□ -0.53
TNS3-204ENST00000428457 ATP10BO94823 1461 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 FYB1O15117 783 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 TTC21AQ8NDW8 1320 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 ITSN2Q9NZM3 1697 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 KIF18AQ8NI77 898 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
TNS3-204ENST00000428457 NKTRP30414 1462 aaKnown RBP11.73□□□□□ -0.53
TNS3-204ENST00000428457 MCM5P33992 734 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 CENPHQ9H3R5 247 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
TNS3-204ENST00000428457 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
TNS3-204ENST00000428457 UGGT2Q9NYU1 1516 aa11.72□□□□□ -0.53
TNS3-204ENST00000428457 URI1O94763 535 aaPredicted RBP11.72□□□□□ -0.53
TNS3-204ENST00000428457 DDX11Q96FC9 970 aa11.72□□□□□ -0.53
TNS3-204ENST00000428457 CLIP2Q9UDT6 1046 aa11.72□□□□□ -0.53
TNS3-204ENST00000428457 OFD1O75665 1012 aa11.72□□□□□ -0.53
TNS3-204ENST00000428457 CASTP20810 708 aaKnown RBP11.72□□□□□ -0.53
TNS3-204ENST00000428457 POLD1P28340 1107 aa11.72□□□□□ -0.53
TNS3-204ENST00000428457 BLOC1S2Q6QNY1 142 aa11.72□□□□□ -0.53
TNS3-204ENST00000428457 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
TNS3-204ENST00000428457 THUMPD2Q9BTF0 503 aaKnown RBP11.72□□□□□ -0.53
TNS3-204ENST00000428457 NSD2O96028 1365 aa11.72□□□□□ -0.53
TNS3-204ENST00000428457 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.53
TNS3-204ENST00000428457 RPGRQ92834 1020 aaKnown RBP11.71□□□□□ -0.53
TNS3-204ENST00000428457 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
TNS3-204ENST00000428457 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
TNS3-204ENST00000428457 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
TNS3-204ENST00000428457 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.54
TNS3-204ENST00000428457 IFNL2Q8IZJ0 200 aa11.71□□□□□ -0.54
TNS3-204ENST00000428457 C14orf93Q9H972 538 aaKnown RBP11.71□□□□□ -0.54
TNS3-204ENST00000428457 CFAP100Q494V2 611 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 SIL1Q9H173 461 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 TMX1Q9H3N1 280 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 PTPRKQ15262 1439 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 PRIMPOLQ96LW4 560 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
TNS3-204ENST00000428457 PRM3Q9NNZ6 103 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 ANKRD1Q15327 319 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
TNS3-204ENST00000428457 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms