RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 ASAP1Q9ULH1 1129 aa25.66■■□□□ 1.7
AC004540.1-203ENST00000421862 ITPK1Q13572 414 aa25.65■■□□□ 1.7
AC004540.1-203ENST00000421862 POLR3GLQ9BT43 218 aa25.65■■□□□ 1.7
AC004540.1-203ENST00000421862 MYH14Q7Z406 1995 aaKnown RBP25.65■■□□□ 1.7
AC004540.1-203ENST00000421862 TJP1Q07157 1748 aa25.64■■□□□ 1.7
AC004540.1-203ENST00000421862 TNNT2P45379 298 aaPredicted RBP25.64■■□□□ 1.7
AC004540.1-203ENST00000421862 C1QTNF8P60827 252 aa25.64■■□□□ 1.7
AC004540.1-203ENST00000421862 PHF14O94880 888 aa25.63■■□□□ 1.69
AC004540.1-203ENST00000421862 PANK3Q9H999 370 aa25.63■■□□□ 1.69
AC004540.1-203ENST00000421862 ATG3Q9NT62 314 aa25.63■■□□□ 1.69
AC004540.1-203ENST00000421862 BRCA1P38398 1863 aaKnown RBP25.63■■□□□ 1.69
AC004540.1-203ENST00000421862 ADCY9O60503 1353 aa25.62■■□□□ 1.69
AC004540.1-203ENST00000421862 SMIM5Q71RC9 77 aa25.62■■□□□ 1.69
AC004540.1-203ENST00000421862 ATP6V1AP38606 617 aa25.6■■□□□ 1.69
AC004540.1-203ENST00000421862 N4BP2Q86UW6 1770 aaPredicted RBP25.59■■□□□ 1.69
AC004540.1-203ENST00000421862 ERVV-2B6SEH9 535 aa25.59■■□□□ 1.69
AC004540.1-203ENST00000421862 GNPATO15228 680 aa25.59■■□□□ 1.69
AC004540.1-203ENST00000421862 HSP90AB1P08238 724 aaKnown RBP25.58■■□□□ 1.69
AC004540.1-203ENST00000421862 DCAF5Q96JK2 942 aa25.58■■□□□ 1.69
AC004540.1-203ENST00000421862 ATP10DQ9P241 1426 aa25.57■■□□□ 1.68
AC004540.1-203ENST00000421862 GIGYF1O75420 1035 aaPredicted RBP25.57■■□□□ 1.68
AC004540.1-203ENST00000421862 SLC4A9Q96Q91 983 aa25.57■■□□□ 1.68
AC004540.1-203ENST00000421862 ADAMTS7Q9UKP4 1686 aa25.57■■□□□ 1.68
AC004540.1-203ENST00000421862 AMOTQ4VCS5 1084 aa25.55■■□□□ 1.68
AC004540.1-203ENST00000421862 PLEKHO1Q53GL0 409 aaPredicted RBP25.55■■□□□ 1.68
AC004540.1-203ENST00000421862 CNTNAP4Q9C0A0 1308 aa25.55■■□□□ 1.68
AC004540.1-203ENST00000421862 C10orf71Q711Q0 1435 aa25.54■■□□□ 1.68
AC004540.1-203ENST00000421862 PXDNLA1KZ92 1463 aa25.54■■□□□ 1.68
AC004540.1-203ENST00000421862 MRC1P22897 1456 aa25.53■■□□□ 1.68
AC004540.1-203ENST00000421862 SENP3-EIF4A1A0A087X0R7 540 aa25.53■■□□□ 1.68
AC004540.1-203ENST00000421862 ZNF530Q6P9A1 599 aaPredicted RBP25.53■■□□□ 1.68
AC004540.1-203ENST00000421862 AEBP1Q8IUX7 1158 aa25.53■■□□□ 1.68
AC004540.1-203ENST00000421862 ARFGEF1Q9Y6D6 1849 aa25.52■■□□□ 1.68
AC004540.1-203ENST00000421862 MORC1Q86VD1 984 aa25.52■■□□□ 1.68
AC004540.1-203ENST00000421862 ADRA2BP18089 450 aa25.51■■□□□ 1.67
AC004540.1-203ENST00000421862 RC3H1Q5TC82 1133 aaKnown RBP25.51■■□□□ 1.67
AC004540.1-203ENST00000421862 RTCBQ9Y3I0 505 aaKnown RBP25.5■■□□□ 1.67
AC004540.1-203ENST00000421862 MMP10P09238 476 aa25.49■■□□□ 1.67
AC004540.1-203ENST00000421862 UBR2Q8IWV8 1755 aa25.49■■□□□ 1.67
AC004540.1-203ENST00000421862 IL13P35225 146 aa25.48■■□□□ 1.67
AC004540.1-203ENST00000421862 AMER1Q5JTC6 1135 aaPredicted RBP25.48■■□□□ 1.67
AC004540.1-203ENST00000421862 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
AC004540.1-203ENST00000421862 KNSTRNQ9Y448 316 aa25.47■■□□□ 1.67
AC004540.1-203ENST00000421862 CABP4P57796 275 aa25.46■■□□□ 1.67
AC004540.1-203ENST00000421862 TRAPPC3LQ5T215 181 aa25.46■■□□□ 1.67
AC004540.1-203ENST00000421862 C1orf141Q5JVX7 400 aa25.45■■□□□ 1.66
AC004540.1-203ENST00000421862 SULT6B1Q6IMI4 303 aa25.45■■□□□ 1.66
AC004540.1-203ENST00000421862 CCER1Q8TC90 406 aaPredicted RBP25.45■■□□□ 1.66
AC004540.1-203ENST00000421862 KIF7Q2M1P5 1343 aa25.44■■□□□ 1.66
AC004540.1-203ENST00000421862 RPS6KA4O75676 772 aa25.44■■□□□ 1.66
AC004540.1-203ENST00000421862 MTHFSP49914 203 aa25.44■■□□□ 1.66
AC004540.1-203ENST00000421862 NLGN1Q8N2Q7 840 aa25.44■■□□□ 1.66
AC004540.1-203ENST00000421862 ARHGEF1Q92888 912 aaKnown RBP25.44■■□□□ 1.66
AC004540.1-203ENST00000421862 CEP350Q5VT06 3117 aa25.44■■□□□ 1.66
AC004540.1-203ENST00000421862 GYS1P13807 737 aa25.43■■□□□ 1.66
AC004540.1-203ENST00000421862 KCPQ6ZWJ8 1503 aa25.42■■□□□ 1.66
AC004540.1-203ENST00000421862 WWC3Q9ULE0 1092 aa25.41■■□□□ 1.66
AC004540.1-203ENST00000421862 SIPA1L3O60292 1781 aaPredicted RBP25.41■■□□□ 1.66
AC004540.1-203ENST00000421862 TGFB2P61812 414 aa25.4■■□□□ 1.66
AC004540.1-203ENST00000421862 NFATC2IPQ8NCF5 419 aa25.4■■□□□ 1.66
AC004540.1-203ENST00000421862 NRXN2Q9P2S2 1712 aa25.4■■□□□ 1.66
AC004540.1-203ENST00000421862 COL3A1P02461 1466 aaPredicted RBP25.4■■□□□ 1.66
AC004540.1-203ENST00000421862 GPBP1L1Q9HC44 474 aaPredicted RBP25.39■■□□□ 1.66
AC004540.1-203ENST00000421862 AFDNP55196 1824 aaKnown RBP25.39■■□□□ 1.65
AC004540.1-203ENST00000421862 DLEC1Q9Y238 1755 aa25.39■■□□□ 1.65
AC004540.1-203ENST00000421862 PTCD1O75127 700 aaKnown RBP25.38■■□□□ 1.65
AC004540.1-203ENST00000421862 RFC4P35249 363 aa25.38■■□□□ 1.65
AC004540.1-203ENST00000421862 CRKLP46109 303 aaKnown RBP25.38■■□□□ 1.65
AC004540.1-203ENST00000421862 AKAP4Q5JQC9 854 aa25.38■■□□□ 1.65
AC004540.1-203ENST00000421862 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
AC004540.1-203ENST00000421862 CCDC87Q9NVE4 849 aa25.36■■□□□ 1.65
AC004540.1-203ENST00000421862 PER1O15534 1290 aaPredicted RBP25.35■■□□□ 1.65
AC004540.1-203ENST00000421862 SLC52A2Q9HAB3 445 aa25.35■■□□□ 1.65
AC004540.1-203ENST00000421862 NPC1L1Q9UHC9 1359 aa25.33■■□□□ 1.65
AC004540.1-203ENST00000421862 PARP3Q9Y6F1 533 aa25.33■■□□□ 1.65
AC004540.1-203ENST00000421862 SBF1O95248 1867 aa25.32■■□□□ 1.64
AC004540.1-203ENST00000421862 A0A0G2JLW4 131 aa25.31■■□□□ 1.64
AC004540.1-203ENST00000421862 INTS5Q6P9B9 1019 aaKnown RBP25.31■■□□□ 1.64
AC004540.1-203ENST00000421862 SRP68Q9UHB9 627 aaKnown RBP25.31■■□□□ 1.64
AC004540.1-203ENST00000421862 SCN7AQ01118 1682 aa25.31■■□□□ 1.64
AC004540.1-203ENST00000421862 DPEP1P16444 411 aa25.3■■□□□ 1.64
AC004540.1-203ENST00000421862 DDR1Q08345 913 aa25.3■■□□□ 1.64
AC004540.1-203ENST00000421862 ZNF526Q8TF50 670 aaPredicted RBP25.3■■□□□ 1.64
AC004540.1-203ENST00000421862 BCS1LQ9Y276 419 aa25.3■■□□□ 1.64
AC004540.1-203ENST00000421862 RNMTO43148 476 aaKnown RBP25.29■■□□□ 1.64
AC004540.1-203ENST00000421862 KCNA3P22001 575 aa25.29■■□□□ 1.64
AC004540.1-203ENST00000421862 FKBP8Q14318 412 aa25.29■■□□□ 1.64
AC004540.1-203ENST00000421862 LGR6Q9HBX8 967 aa25.29■■□□□ 1.64
AC004540.1-203ENST00000421862 SOS1Q07889 1333 aaPredicted RBP25.29■■□□□ 1.64
AC004540.1-203ENST00000421862 KIF3CO14782 793 aa25.28■■□□□ 1.64
AC004540.1-203ENST00000421862 HMOX1P09601 288 aa25.28■■□□□ 1.64
AC004540.1-203ENST00000421862 DNAJC10Q8IXB1 793 aa25.28■■□□□ 1.64
AC004540.1-203ENST00000421862 DIAPH1O60610 1272 aaKnown RBP25.26■■□□□ 1.63
AC004540.1-203ENST00000421862 MTHFSDQ2M296 383 aaKnown RBP25.26■■□□□ 1.63
AC004540.1-203ENST00000421862 COL15A1P39059 1388 aa25.26■■□□□ 1.63
AC004540.1-203ENST00000421862 CYP19A1P11511 503 aaPredicted RBP25.25■■□□□ 1.63
AC004540.1-203ENST00000421862 TNRC6CQ9HCJ0 1690 aaKnown RBP25.25■■□□□ 1.63
AC004540.1-203ENST00000421862 POLRMTO00411 1230 aaKnown RBP25.24■■□□□ 1.63
AC004540.1-203ENST00000421862 HSPA6P17066 643 aa25.24■■□□□ 1.63
AC004540.1-203ENST00000421862 FCHSD2O94868 740 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms