RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 ZNF358Q9NW07 568 aa8.1□□□□□ -1.11
TTC39DP-201ENST00000416781 STK17AQ9UEE5 414 aa8.1□□□□□ -1.11
TTC39DP-201ENST00000416781 TMEM229AB2RXF0 380 aa8.09□□□□□ -1.11
TTC39DP-201ENST00000416781 DGAT1O75907 488 aa8.09□□□□□ -1.11
TTC39DP-201ENST00000416781 AVPP01185 164 aa8.09□□□□□ -1.11
TTC39DP-201ENST00000416781 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 TMEM88BA6NKF7 163 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 WASLO00401 505 aaPredicted RBP8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 IGSF3O75054 1194 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 INHAP05111 366 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 PTGIRP43119 386 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 UPP2O95045 317 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 HSP90B1P14625 803 aaKnown RBP8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 SWI5Q1ZZU3 235 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 TSEN34Q9BSV6 310 aaKnown RBP8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 SERTAD1Q9UHV2 236 aa8.08□□□□□ -1.12
TTC39DP-201ENST00000416781 A0A1W2PRU2 124 aa8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 MEN1O00255 615 aa8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 BACH1O14867 736 aa8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 IL2RAP01589 272 aa8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 CLN3Q13286 438 aa8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 CTC1Q2NKJ3 1217 aa8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 TSEN2Q8NCE0 465 aaKnown RBP8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 ZNF395Q9H8N7 513 aaPredicted RBP8.07□□□□□ -1.12
TTC39DP-201ENST00000416781 M0R2N6 131 aa8.06□□□□□ -1.12
TTC39DP-201ENST00000416781 FAM69CQ0P6D2 419 aa8.06□□□□□ -1.12
TTC39DP-201ENST00000416781 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
TTC39DP-201ENST00000416781 CNKSR1Q969H4 720 aa8.06□□□□□ -1.12
TTC39DP-201ENST00000416781 HINFPQ9BQA5 517 aa8.06□□□□□ -1.12
TTC39DP-201ENST00000416781 TRAIPQ9BWF2 469 aa8.06□□□□□ -1.12
TTC39DP-201ENST00000416781 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
TTC39DP-201ENST00000416781 NLRP3Q96P20 1036 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 ESYT1Q9BSJ8 1104 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 AXIN1O15169 862 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 BMP2P12643 396 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 BMP1P13497 986 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 TLR1Q15399 786 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 MRPL14Q6P1L8 145 aaKnown RBP8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 CLP1Q92989 425 aaKnown RBP8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 XAGE2Q96GT9 111 aa8.05□□□□□ -1.12
TTC39DP-201ENST00000416781 LGR5O75473 907 aa8.04□□□□□ -1.12
TTC39DP-201ENST00000416781 SPINT1O43278 529 aa8.03□□□□□ -1.12
TTC39DP-201ENST00000416781 TAF7LQ5H9L4 462 aa8.03□□□□□ -1.12
TTC39DP-201ENST00000416781 TNS4Q8IZW8 715 aa8.03□□□□□ -1.12
TTC39DP-201ENST00000416781 CRIPAKQ8N1N5 446 aa8.03□□□□□ -1.12
TTC39DP-201ENST00000416781 SLC4A9Q96Q91 983 aa8.03□□□□□ -1.12
TTC39DP-201ENST00000416781 INSM2Q96T92 566 aaPredicted RBP8.03□□□□□ -1.12
TTC39DP-201ENST00000416781 POLMQ9NP87 494 aaPredicted RBP8.03□□□□□ -1.12
TTC39DP-201ENST00000416781 A6NJY4 79 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 PRMT3O60678 531 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 SMTNP53814 917 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 SCARF1Q14162 830 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 B4GALNT3Q6L9W6 998 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 ATP2B4P23634 1241 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 EPHA4P54764 986 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 SLAIN2Q9P270 581 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 HRH3Q9Y5N1 445 aa8.02□□□□□ -1.13
TTC39DP-201ENST00000416781 ST8SIA5O15466 376 aa8.01□□□□□ -1.13
TTC39DP-201ENST00000416781 CENPCQ03188 943 aa8.01□□□□□ -1.13
TTC39DP-201ENST00000416781 TRIM46Q7Z4K8 759 aa8.01□□□□□ -1.13
TTC39DP-201ENST00000416781 PRIMPOLQ96LW4 560 aa8.01□□□□□ -1.13
TTC39DP-201ENST00000416781 TSPAN10Q9H1Z9 355 aaPredicted RBP8.01□□□□□ -1.13
TTC39DP-201ENST00000416781 GPC1P35052 558 aa8□□□□□ -1.13
TTC39DP-201ENST00000416781 MTFR1Q15390 333 aa8□□□□□ -1.13
TTC39DP-201ENST00000416781 SLC27A3Q5K4L6 730 aa8□□□□□ -1.13
TTC39DP-201ENST00000416781 SLC9A9Q8IVB4 645 aa8□□□□□ -1.13
TTC39DP-201ENST00000416781 DHX37Q8IY37 1157 aaKnown RBP8□□□□□ -1.13
TTC39DP-201ENST00000416781 NBPF15Q8N660 670 aa8□□□□□ -1.13
TTC39DP-201ENST00000416781 PUS7Q96PZ0 661 aaKnown RBP8□□□□□ -1.13
TTC39DP-201ENST00000416781 ZSCAN10Q96SZ4 725 aaPredicted RBP8□□□□□ -1.13
TTC39DP-201ENST00000416781 AAASQ9NRG9 546 aa8□□□□□ -1.13
TTC39DP-201ENST00000416781 SCHIP1Q9P0W5 487 aaPredicted RBP8□□□□□ -1.13
TTC39DP-201ENST00000416781 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
TTC39DP-201ENST00000416781 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
TTC39DP-201ENST00000416781 FHDC1Q9C0D6 1143 aaPredicted RBP7.99□□□□□ -1.13
TTC39DP-201ENST00000416781 BRD1O95696 1058 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 OCLNQ16625 522 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 FOXD4L5Q5VV16 416 aaPredicted RBP7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 SCG3Q8WXD2 468 aaKnown RBP7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 CXXC1Q9P0U4 656 aaPredicted RBP7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 NEFLP07196 543 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 IGFBP4P22692 258 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 SSFA2P28290 1259 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 WEE1P30291 646 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 RNF144AP50876 292 aaPredicted RBP7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 FOXK2Q01167 660 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 TBCELQ5QJ74 424 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 TMEM214Q6NUQ4 689 aaKnown RBP7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 AEBP1Q8IUX7 1158 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 ZFP42Q96MM3 310 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 ATP13A2Q9NQ11 1180 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 USP3Q9Y6I4 520 aa7.98□□□□□ -1.13
TTC39DP-201ENST00000416781 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
TTC39DP-201ENST00000416781 PPP1R12BO60237 982 aaPredicted RBP7.97□□□□□ -1.13
TTC39DP-201ENST00000416781 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms