RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TMEM229AB2RXF0 380 aa7.34□□□□□ -1.23
BRCA1-204ENST00000412061 SCNN1DP51172 638 aa7.34□□□□□ -1.23
BRCA1-204ENST00000412061 GDF10P55107 478 aa7.34□□□□□ -1.23
BRCA1-204ENST00000412061 TSEN2Q8NCE0 465 aaKnown RBP7.34□□□□□ -1.23
BRCA1-204ENST00000412061 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
BRCA1-204ENST00000412061 CXXC1Q9P0U4 656 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-204ENST00000412061 GNRH1P01148 92 aa7.33□□□□□ -1.24
BRCA1-204ENST00000412061 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
BRCA1-204ENST00000412061 OCLNQ16625 522 aa7.33□□□□□ -1.24
BRCA1-204ENST00000412061 ESCO1Q5FWF5 840 aa7.33□□□□□ -1.24
BRCA1-204ENST00000412061 CRIPAKQ8N1N5 446 aa7.33□□□□□ -1.24
BRCA1-204ENST00000412061 TOR4AQ9NXH8 423 aa7.33□□□□□ -1.24
BRCA1-204ENST00000412061 TTC24A2A3L6 582 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-204ENST00000412061 INHAP05111 366 aa7.32□□□□□ -1.24
BRCA1-204ENST00000412061 ADD1P35611 737 aaKnown RBP7.32□□□□□ -1.24
BRCA1-204ENST00000412061 FOXD4L5Q5VV16 416 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-204ENST00000412061 SND1Q7KZF4 910 aaKnown RBP eCLIP7.32□□□□□ -1.24
BRCA1-204ENST00000412061 FOXD4L4Q8WXT5 416 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-204ENST00000412061 ETNK1Q9HBU6 452 aa7.32□□□□□ -1.24
BRCA1-204ENST00000412061 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
BRCA1-204ENST00000412061 SHROOM4Q9ULL8 1493 aa7.32□□□□□ -1.24
BRCA1-204ENST00000412061 LGR5O75473 907 aa7.31□□□□□ -1.24
BRCA1-204ENST00000412061 STAU1O95793 577 aaKnown RBP7.31□□□□□ -1.24
BRCA1-204ENST00000412061 AVPP01185 164 aa7.31□□□□□ -1.24
BRCA1-204ENST00000412061 WEE1P30291 646 aa7.31□□□□□ -1.24
BRCA1-204ENST00000412061 RBM25P49756 843 aaKnown RBP7.31□□□□□ -1.24
BRCA1-204ENST00000412061 CYP4X1Q8N118 509 aa7.31□□□□□ -1.24
BRCA1-204ENST00000412061 IGSF3O75054 1194 aa7.3□□□□□ -1.24
BRCA1-204ENST00000412061 ADH1AP07327 375 aa7.3□□□□□ -1.24
BRCA1-204ENST00000412061 TAS1R3Q7RTX0 852 aa7.3□□□□□ -1.24
BRCA1-204ENST00000412061 ZNF428Q96B54 188 aa7.3□□□□□ -1.24
BRCA1-204ENST00000412061 SERTAD1Q9UHV2 236 aa7.3□□□□□ -1.24
BRCA1-204ENST00000412061 J3QL48 77 aa7.29□□□□□ -1.24
BRCA1-204ENST00000412061 ZIC2O95409 532 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-204ENST00000412061 IGFBP4P22692 258 aa7.29□□□□□ -1.24
BRCA1-204ENST00000412061 TNS4Q8IZW8 715 aa7.29□□□□□ -1.24
BRCA1-204ENST00000412061 SLC4A9Q96Q91 983 aa7.29□□□□□ -1.24
BRCA1-204ENST00000412061 ARHGEF10LQ9HCE6 1279 aa7.29□□□□□ -1.24
BRCA1-204ENST00000412061 RAB6BQ9NRW1 208 aa7.29□□□□□ -1.24
BRCA1-204ENST00000412061 AXIN1O15169 862 aa7.28□□□□□ -1.24
BRCA1-204ENST00000412061 FOXO3O43524 673 aa7.28□□□□□ -1.24
BRCA1-204ENST00000412061 WDR4P57081 412 aaKnown RBP7.28□□□□□ -1.24
BRCA1-204ENST00000412061 GAS2L2Q8NHY3 880 aa7.28□□□□□ -1.24
BRCA1-204ENST00000412061 ITPKCQ96DU7 683 aa7.28□□□□□ -1.24
BRCA1-204ENST00000412061 PTCD1O75127 700 aaKnown RBP7.27□□□□□ -1.24
BRCA1-204ENST00000412061 WFS1O76024 890 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 SCNN1AP37088 669 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 SERPINB4P48594 390 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 EPHA4P54764 986 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 CBLBQ13191 982 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 FKBP5Q13451 457 aaPredicted RBP7.27□□□□□ -1.24
BRCA1-204ENST00000412061 CCDC27Q2M243 656 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 Q6ZVU0 165 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 SCG3Q8WXD2 468 aaKnown RBP7.27□□□□□ -1.24
BRCA1-204ENST00000412061 XAGE2Q96GT9 111 aa7.27□□□□□ -1.24
BRCA1-204ENST00000412061 KLF16Q9BXK1 252 aaPredicted RBP7.27□□□□□ -1.24
BRCA1-204ENST00000412061 ATAD2Q6PL18 1390 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 SOWAHDA6NJG2 315 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 A6NJY4 79 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 C11orf95C9JLR9 678 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-204ENST00000412061 IL2RAP01589 272 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 TIMP2P16035 220 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 SMPD1P17405 629 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 SMTNP53814 917 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 NFX1Q12986 1120 aaKnown RBP7.27□□□□□ -1.25
BRCA1-204ENST00000412061 MTFR1Q15390 333 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 CNKSR1Q969H4 720 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 COL26A1Q96A83 441 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 ESYT1Q9BSJ8 1104 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 MKNK1Q9BUB5 465 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 TSPAN10Q9H1Z9 355 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-204ENST00000412061 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
BRCA1-204ENST00000412061 A0A1W2PRU2 124 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 PTGIRP43119 386 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-204ENST00000412061 CLN3Q13286 438 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 TLR1Q15399 786 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 CTC1Q2NKJ3 1217 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 VTI1AQ96AJ9 217 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 SCHIP1Q9P0W5 487 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-204ENST00000412061 EGFL7Q9UHF1 273 aa7.26□□□□□ -1.25
BRCA1-204ENST00000412061 C21orf2O43822 256 aa7.25□□□□□ -1.25
BRCA1-204ENST00000412061 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-204ENST00000412061 ABL1P00519 1130 aa7.25□□□□□ -1.25
BRCA1-204ENST00000412061 FOXK2Q01167 660 aa7.25□□□□□ -1.25
BRCA1-204ENST00000412061 SLC9A9Q8IVB4 645 aa7.25□□□□□ -1.25
BRCA1-204ENST00000412061 KDF1Q8NAX2 398 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-204ENST00000412061 CHMP7Q8WUX9 453 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-204ENST00000412061 NLRP3Q96P20 1036 aa7.25□□□□□ -1.25
BRCA1-204ENST00000412061 PURBQ96QR8 312 aaKnown RBP7.25□□□□□ -1.25
BRCA1-204ENST00000412061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.25□□□□□ -1.25
BRCA1-204ENST00000412061 MEN1O00255 615 aa7.24□□□□□ -1.25
BRCA1-204ENST00000412061 CDK2AP1O14519 115 aa7.24□□□□□ -1.25
BRCA1-204ENST00000412061 PSMA6P60900 246 aaKnown RBP7.24□□□□□ -1.25
BRCA1-204ENST00000412061 RELBQ01201 579 aa7.24□□□□□ -1.25
BRCA1-204ENST00000412061 STAG2Q8N3U4 1231 aa7.24□□□□□ -1.25
BRCA1-204ENST00000412061 NBPF15Q8N660 670 aa7.24□□□□□ -1.25
BRCA1-204ENST00000412061 GTF3C2Q8WUA4 911 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-204ENST00000412061 AGBL1Q96MI9 1066 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms