RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 GTPBP3Q969Y2 492 aaKnown RBP9.33□□□□□ -0.92
CLK1-203ENST00000409769 CDCA7Q9BWT1 371 aaPredicted RBP9.33□□□□□ -0.92
CLK1-203ENST00000409769 IGF1RP08069 1367 aa9.33□□□□□ -0.92
CLK1-203ENST00000409769 GPR25O00155 361 aa9.32□□□□□ -0.92
CLK1-203ENST00000409769 IRF5Q13568 498 aa9.32□□□□□ -0.92
CLK1-203ENST00000409769 CFHR5Q9BXR6 569 aa9.32□□□□□ -0.92
CLK1-203ENST00000409769 CHIC2Q9UKJ5 165 aa9.32□□□□□ -0.92
CLK1-203ENST00000409769 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
CLK1-203ENST00000409769 DNMT3AQ9Y6K1 912 aaPredicted RBP9.32□□□□□ -0.92
CLK1-203ENST00000409769 MX2P20592 715 aa9.31□□□□□ -0.92
CLK1-203ENST00000409769 MAP2K3P46734 347 aa9.31□□□□□ -0.92
CLK1-203ENST00000409769 MAP7D1Q3KQU3 841 aa9.31□□□□□ -0.92
CLK1-203ENST00000409769 TMEM214Q6NUQ4 689 aaKnown RBP9.31□□□□□ -0.92
CLK1-203ENST00000409769 BCRP11274 1271 aa9.3□□□□□ -0.92
CLK1-203ENST00000409769 FOXK2Q01167 660 aa9.3□□□□□ -0.92
CLK1-203ENST00000409769 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
CLK1-203ENST00000409769 FHDC1Q9C0D6 1143 aaPredicted RBP9.3□□□□□ -0.92
CLK1-203ENST00000409769 PHF20L1A8MW92 1017 aa9.29□□□□□ -0.92
CLK1-203ENST00000409769 CSB-PGBD3P0DP91 1061 aa9.29□□□□□ -0.92
CLK1-203ENST00000409769 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
CLK1-203ENST00000409769 RHBDD1Q8TEB9 315 aa9.29□□□□□ -0.92
CLK1-203ENST00000409769 IGHA1P01876 353 aa9.28□□□□□ -0.92
CLK1-203ENST00000409769 IRS1P35568 1242 aa9.28□□□□□ -0.92
CLK1-203ENST00000409769 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
CLK1-203ENST00000409769 VAC14Q08AM6 782 aa9.27□□□□□ -0.93
CLK1-203ENST00000409769 SEMA3FQ13275 785 aa9.27□□□□□ -0.93
CLK1-203ENST00000409769 PPARGC1BQ86YN6 1023 aaKnown RBP9.27□□□□□ -0.93
CLK1-203ENST00000409769 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
CLK1-203ENST00000409769 ABL2P42684 1182 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 TLR1Q15399 786 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 EFHC2Q5JST6 749 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 BEND7Q8N7W2 519 aaPredicted RBP9.26□□□□□ -0.93
CLK1-203ENST00000409769 NEDD1Q8NHV4 660 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 ETNK1Q9HBU6 452 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 GPAMQ9HCL2 828 aa9.26□□□□□ -0.93
CLK1-203ENST00000409769 PHKA2P46019 1235 aa9.25□□□□□ -0.93
CLK1-203ENST00000409769 ACDQ96AP0 544 aa9.25□□□□□ -0.93
CLK1-203ENST00000409769 MCM6Q14566 821 aa9.24□□□□□ -0.93
CLK1-203ENST00000409769 WWC1Q8IX03 1113 aa9.24□□□□□ -0.93
CLK1-203ENST00000409769 PLPP7Q8NBV4 271 aa9.24□□□□□ -0.93
CLK1-203ENST00000409769 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
CLK1-203ENST00000409769 OXCT2Q9BYC2 517 aaPredicted RBP9.24□□□□□ -0.93
CLK1-203ENST00000409769 GDF2Q9UK05 429 aaPredicted RBP9.24□□□□□ -0.93
CLK1-203ENST00000409769 ATXN7L1Q9ULK2 861 aaPredicted RBP9.24□□□□□ -0.93
CLK1-203ENST00000409769 OIP5O43482 229 aa9.23□□□□□ -0.93
CLK1-203ENST00000409769 INHAP05111 366 aa9.23□□□□□ -0.93
CLK1-203ENST00000409769 TSGA10IPQ3SY00 556 aa9.23□□□□□ -0.93
CLK1-203ENST00000409769 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
CLK1-203ENST00000409769 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
CLK1-203ENST00000409769 MSX1P28360 303 aa9.22□□□□□ -0.93
CLK1-203ENST00000409769 GDF10P55107 478 aa9.22□□□□□ -0.93
CLK1-203ENST00000409769 FIGNL1Q6PIW4 674 aa9.22□□□□□ -0.93
CLK1-203ENST00000409769 TBC1D9Q6ZT07 1266 aa9.22□□□□□ -0.93
CLK1-203ENST00000409769 SCNN1DP51172 638 aa9.21□□□□□ -0.94
CLK1-203ENST00000409769 NIFKQ9BYG3 293 aaKnown RBP9.21□□□□□ -0.94
CLK1-203ENST00000409769 THBS1P07996 1170 aa9.2□□□□□ -0.94
CLK1-203ENST00000409769 UBAP2LQ14157 1087 aaKnown RBP9.2□□□□□ -0.94
CLK1-203ENST00000409769 GOLGA6L1Q8N7Z2 621 aa9.2□□□□□ -0.94
CLK1-203ENST00000409769 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
CLK1-203ENST00000409769 SMTNP53814 917 aa9.19□□□□□ -0.94
CLK1-203ENST00000409769 NLRP8Q86W28 1048 aa9.18□□□□□ -0.94
CLK1-203ENST00000409769 NFATC2IPQ8NCF5 419 aa9.18□□□□□ -0.94
CLK1-203ENST00000409769 KLRG1Q96E93 195 aa9.18□□□□□ -0.94
CLK1-203ENST00000409769 CNTNAP5Q8WYK1 1306 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 PLA2G4AP47712 749 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 EML3Q32P44 896 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 ALYREFQ86V81 257 aaKnown RBP9.17□□□□□ -0.94
CLK1-203ENST00000409769 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
CLK1-203ENST00000409769 BMP4P12644 408 aa9.16□□□□□ -0.94
CLK1-203ENST00000409769 FGFR3P22607 806 aa9.16□□□□□ -0.94
CLK1-203ENST00000409769 MTFR1Q15390 333 aa9.16□□□□□ -0.94
CLK1-203ENST00000409769 PIK3R2O00459 728 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 CDK2AP1O14519 115 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 BACH1O14867 736 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
CLK1-203ENST00000409769 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
CLK1-203ENST00000409769 GALNT6Q8NCL4 622 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 ZDHHC3Q9NYG2 299 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 MKL2Q9ULH7 1088 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 PCDHGC4Q9Y5F7 938 aa9.15□□□□□ -0.94
CLK1-203ENST00000409769 A6NJY4 79 aa9.14□□□□□ -0.95
CLK1-203ENST00000409769 BNIP3LO60238 219 aa9.14□□□□□ -0.95
CLK1-203ENST00000409769 TATP17735 454 aaPredicted RBP9.14□□□□□ -0.95
CLK1-203ENST00000409769 SLCO4C1Q6ZQN7 724 aa9.14□□□□□ -0.95
CLK1-203ENST00000409769 EDARADDQ8WWZ3 215 aa9.14□□□□□ -0.95
CLK1-203ENST00000409769 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
CLK1-203ENST00000409769 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
CLK1-203ENST00000409769 NISCHQ9Y2I1 1504 aa9.14□□□□□ -0.95
CLK1-203ENST00000409769 TMEM229AB2RXF0 380 aa9.13□□□□□ -0.95
CLK1-203ENST00000409769 RAD21O60216 631 aa9.13□□□□□ -0.95
CLK1-203ENST00000409769 ATP4AP20648 1035 aa9.13□□□□□ -0.95
CLK1-203ENST00000409769 AIDAQ96BJ3 306 aa9.13□□□□□ -0.95
CLK1-203ENST00000409769 ALG2Q9H553 416 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms