RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 KAT6BQ8WYB5 2073 aa7.96□□□□□ -1.13
HMGB1P20-201ENST00000402555 TNS2Q63HR2 1409 aa7.96□□□□□ -1.13
HMGB1P20-201ENST00000402555 TNNT2P45379 298 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P20-201ENST00000402555 HSP90AB2PQ58FF8 381 aa7.96□□□□□ -1.14
HMGB1P20-201ENST00000402555 CGNL1Q0VF96 1302 aa7.96□□□□□ -1.14
HMGB1P20-201ENST00000402555 RTL1A6NKG5 1358 aa7.96□□□□□ -1.14
HMGB1P20-201ENST00000402555 FAM208AQ9UK61 1670 aaKnown RBP7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 PPM1GO15355 546 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 KCNQ2O43526 872 aa7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 NBPF6Q5VWK0 638 aa7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 RNF25Q96BH1 459 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 ACSBG1Q96GR2 724 aa7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 NBPF4Q96M43 638 aa7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 KIF7Q2M1P5 1343 aa7.95□□□□□ -1.14
HMGB1P20-201ENST00000402555 MEGF6O75095 1541 aa7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 R3HDM1Q15032 1099 aaKnown RBP7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 BCL11BQ9C0K0 894 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 RREB1Q92766 1687 aa7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 NUP188Q5SRE5 1749 aa7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 INSRP06213 1382 aa7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 FLT4P35916 1363 aa7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 MAP2P11137 1827 aaKnown RBP7.94□□□□□ -1.14
HMGB1P20-201ENST00000402555 ANKRD26Q9UPS8 1709 aa7.93□□□□□ -1.14
HMGB1P20-201ENST00000402555 RIOK3O14730 519 aaKnown RBP7.93□□□□□ -1.14
HMGB1P20-201ENST00000402555 ST18O60284 1047 aa7.93□□□□□ -1.14
HMGB1P20-201ENST00000402555 POLKQ9UBT6 870 aa7.93□□□□□ -1.14
HMGB1P20-201ENST00000402555 BCL9O00512 1426 aa7.93□□□□□ -1.14
HMGB1P20-201ENST00000402555 SMG6Q86US8 1419 aaKnown RBP7.93□□□□□ -1.14
HMGB1P20-201ENST00000402555 DPY19L2Q6NUT2 758 aa7.92□□□□□ -1.14
HMGB1P20-201ENST00000402555 C3orf67Q6ZVT6 689 aa7.92□□□□□ -1.14
HMGB1P20-201ENST00000402555 PLSCR2Q9NRY7 297 aa7.92□□□□□ -1.14
HMGB1P20-201ENST00000402555 PARD3Q8TEW0 1356 aa7.92□□□□□ -1.14
HMGB1P20-201ENST00000402555 NHSQ6T4R5 1651 aa7.92□□□□□ -1.14
HMGB1P20-201ENST00000402555 SHANK3Q9BYB0 1731 aa7.92□□□□□ -1.14
HMGB1P20-201ENST00000402555 ZCRB1Q8TBF4 217 aaKnown RBP7.91□□□□□ -1.14
HMGB1P20-201ENST00000402555 ANO8Q9HCE9 1232 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P20-201ENST00000402555 KNSTRNQ9Y448 316 aa7.91□□□□□ -1.14
HMGB1P20-201ENST00000402555 WASHC2AQ641Q2 1341 aa7.91□□□□□ -1.14
HMGB1P20-201ENST00000402555 KIF24Q5T7B8 1368 aa7.91□□□□□ -1.14
HMGB1P20-201ENST00000402555 BTAF1O14981 1849 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 SNPHO15079 494 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 PLSCR1O15162 318 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 TATP17735 454 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 CNGB1Q14028 1251 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 TXNRD1Q16881 649 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 MORC1Q86VD1 984 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 EFCAB3Q8N7B9 438 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 RAPGEF4Q8WZA2 1011 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 EYA1Q99502 592 aa7.9□□□□□ -1.14
HMGB1P20-201ENST00000402555 RGPD3A6NKT7 1758 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 RGPD4Q7Z3J3 1758 aa7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 DOT1LQ8TEK3 1739 aa7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 NSD2O96028 1365 aa7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 PRIM1P49642 420 aaKnown RBP7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 EIF4A2Q14240 407 aaKnown RBP7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 AMER1Q5JTC6 1135 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 SYTL4Q96C24 671 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P20-201ENST00000402555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P20-201ENST00000402555 CC2D1BQ5T0F9 858 aaKnown RBP7.88□□□□□ -1.15
HMGB1P20-201ENST00000402555 ZFP91Q96JP5 570 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P20-201ENST00000402555 TMEM121BQ9BXQ6 578 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P20-201ENST00000402555 BOLA1Q9Y3E2 137 aa7.88□□□□□ -1.15
HMGB1P20-201ENST00000402555 NCAPD2Q15021 1401 aa7.87□□□□□ -1.15
HMGB1P20-201ENST00000402555 CYP27B1O15528 508 aa7.87□□□□□ -1.15
HMGB1P20-201ENST00000402555 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P20-201ENST00000402555 KCNQ4P56696 695 aa7.87□□□□□ -1.15
HMGB1P20-201ENST00000402555 PDGFDQ9GZP0 370 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P20-201ENST00000402555 LRP5O75197 1615 aa7.87□□□□□ -1.15
HMGB1P20-201ENST00000402555 PKD1L3Q7Z443 1732 aa7.86□□□□□ -1.15
HMGB1P20-201ENST00000402555 PCDH11XQ9BZA7 1347 aa7.86□□□□□ -1.15
HMGB1P20-201ENST00000402555 PCDH11YQ9BZA8 1340 aa7.86□□□□□ -1.15
HMGB1P20-201ENST00000402555 AEBP1Q8IUX7 1158 aa7.86□□□□□ -1.15
HMGB1P20-201ENST00000402555 LRRC4BQ9NT99 713 aa7.86□□□□□ -1.15
HMGB1P20-201ENST00000402555 TOGARAM1Q9Y4F4 1720 aa7.86□□□□□ -1.15
HMGB1P20-201ENST00000402555 IGSF1Q8N6C5 1336 aa7.85□□□□□ -1.15
HMGB1P20-201ENST00000402555 ZNF827Q17R98 1081 aa7.85□□□□□ -1.15
HMGB1P20-201ENST00000402555 STK32BQ9NY57 414 aa7.85□□□□□ -1.15
HMGB1P20-201ENST00000402555 PAPPAQ13219 1627 aa7.85□□□□□ -1.15
HMGB1P20-201ENST00000402555 ZBTB7AO95365 584 aa7.84□□□□□ -1.15
HMGB1P20-201ENST00000402555 MTHFSP49914 203 aa7.84□□□□□ -1.15
HMGB1P20-201ENST00000402555 SLC15A2Q16348 729 aa7.84□□□□□ -1.15
HMGB1P20-201ENST00000402555 MPRIPQ6WCQ1 1025 aa7.84□□□□□ -1.15
HMGB1P20-201ENST00000402555 SPG7Q9UQ90 795 aa7.84□□□□□ -1.15
HMGB1P20-201ENST00000402555 ITGB4P16144 1822 aa7.84□□□□□ -1.15
HMGB1P20-201ENST00000402555 CASZ1Q86V15 1759 aa7.84□□□□□ -1.15
HMGB1P20-201ENST00000402555 G3V3G9 751 aa7.83□□□□□ -1.16
HMGB1P20-201ENST00000402555 PHKG2P15735 406 aa7.83□□□□□ -1.16
HMGB1P20-201ENST00000402555 IL13P35225 146 aa7.83□□□□□ -1.16
HMGB1P20-201ENST00000402555 CDAN1Q8IWY9 1227 aa7.83□□□□□ -1.16
HMGB1P20-201ENST00000402555 LY75O60449 1722 aa7.83□□□□□ -1.16
HMGB1P20-201ENST00000402555 NKX1-1Q15270 411 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P20-201ENST00000402555 SULT6B1Q6IMI4 303 aa7.82□□□□□ -1.16
HMGB1P20-201ENST00000402555 PIGBQ92521 554 aa7.82□□□□□ -1.16
HMGB1P20-201ENST00000402555 MS4A4AQ96JQ5 239 aa7.82□□□□□ -1.16
HMGB1P20-201ENST00000402555 SPON1Q9HCB6 807 aa7.82□□□□□ -1.16
HMGB1P20-201ENST00000402555 CCNL1Q9UK58 526 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P20-201ENST00000402555 PALLDQ8WX93 1383 aa7.82□□□□□ -1.16
HMGB1P20-201ENST00000402555 TUBGCP6Q96RT7 1819 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms