RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ALYREFQ86V81 257 aaKnown RBP6.54□□□□□ -1.36
CD47-203ENST00000398258 F11P03951 625 aa6.53□□□□□ -1.36
CD47-203ENST00000398258 SCTRP47872 440 aa6.53□□□□□ -1.36
CD47-203ENST00000398258 PPP2R2DQ66LE6 453 aa6.53□□□□□ -1.36
CD47-203ENST00000398258 AK7Q96M32 723 aa6.53□□□□□ -1.36
CD47-203ENST00000398258 CFHR5Q9BXR6 569 aa6.53□□□□□ -1.36
CD47-203ENST00000398258 NSFL1CQ9UNZ2 370 aaKnown RBP6.53□□□□□ -1.36
CD47-203ENST00000398258 DGKGP49619 791 aa6.52□□□□□ -1.37
CD47-203ENST00000398258 SLC27A3Q5K4L6 730 aa6.52□□□□□ -1.37
CD47-203ENST00000398258 GPAMQ9HCL2 828 aa6.52□□□□□ -1.37
CD47-203ENST00000398258 TIMMDC1Q9NPL8 285 aa6.52□□□□□ -1.37
CD47-203ENST00000398258 HCN2Q9UL51 889 aa6.52□□□□□ -1.37
CD47-203ENST00000398258 ERVK-9P63128 1117 aa6.51□□□□□ -1.37
CD47-203ENST00000398258 CLN3Q13286 438 aa6.51□□□□□ -1.37
CD47-203ENST00000398258 PROCA1Q8NCQ7 364 aaPredicted RBP6.51□□□□□ -1.37
CD47-203ENST00000398258 BCANQ96GW7 911 aa6.51□□□□□ -1.37
CD47-203ENST00000398258 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
CD47-203ENST00000398258 CTBSQ01459 385 aa6.5□□□□□ -1.37
CD47-203ENST00000398258 SEPT12Q8IYM1 358 aa6.5□□□□□ -1.37
CD47-203ENST00000398258 BTBD6Q96KE9 485 aa6.5□□□□□ -1.37
CD47-203ENST00000398258 GGA1Q9UJY5 639 aa6.5□□□□□ -1.37
CD47-203ENST00000398258 GDF2Q9UK05 429 aaPredicted RBP6.5□□□□□ -1.37
CD47-203ENST00000398258 GNB5O14775 395 aa6.49□□□□□ -1.37
CD47-203ENST00000398258 WDR44Q5JSH3 913 aa6.49□□□□□ -1.37
CD47-203ENST00000398258 SLCO4C1Q6ZQN7 724 aa6.49□□□□□ -1.37
CD47-203ENST00000398258 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.49□□□□□ -1.37
CD47-203ENST00000398258 OSBPL3Q9H4L5 887 aa6.49□□□□□ -1.37
CD47-203ENST00000398258 ARHGEF10LQ9HCE6 1279 aa6.49□□□□□ -1.37
CD47-203ENST00000398258 RAB6BQ9NRW1 208 aa6.49□□□□□ -1.37
CD47-203ENST00000398258 NDFIP2Q9NV92 336 aa6.49□□□□□ -1.37
CD47-203ENST00000398258 PHKA2P46019 1235 aa6.48□□□□□ -1.37
CD47-203ENST00000398258 RSPO4Q2I0M5 234 aaPredicted RBP6.48□□□□□ -1.37
CD47-203ENST00000398258 TAS1R3Q7RTX0 852 aa6.48□□□□□ -1.37
CD47-203ENST00000398258 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
CD47-203ENST00000398258 ABHD17AQ96GS6 310 aa6.48□□□□□ -1.37
CD47-203ENST00000398258 RUBCNLQ9H714 662 aa6.48□□□□□ -1.37
CD47-203ENST00000398258 TRAK2O60296 914 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 AP1G2O75843 785 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 EPXP11678 715 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 AMPD1P23109 780 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 CC2D2BQ6DHV5 1058 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 MCTP1Q6DN14 999 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 NLRP3Q96P20 1036 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 TRIM34Q9BYJ4 488 aa6.47□□□□□ -1.37
CD47-203ENST00000398258 BNIP3LO60238 219 aa6.46□□□□□ -1.38
CD47-203ENST00000398258 IL2RAP01589 272 aa6.46□□□□□ -1.38
CD47-203ENST00000398258 NKAPLQ5M9Q1 402 aa6.46□□□□□ -1.38
CD47-203ENST00000398258 TRIM11Q96F44 468 aa6.46□□□□□ -1.38
CD47-203ENST00000398258 KLF15Q9UIH9 416 aa6.46□□□□□ -1.38
CD47-203ENST00000398258 HRH3Q9Y5N1 445 aa6.46□□□□□ -1.38
CD47-203ENST00000398258 USP17L8P0C7I0 530 aa6.45□□□□□ -1.38
CD47-203ENST00000398258 BMP4P12644 408 aa6.45□□□□□ -1.38
CD47-203ENST00000398258 TXKP42681 527 aa6.45□□□□□ -1.38
CD47-203ENST00000398258 FMNL2Q96PY5 1086 aa6.45□□□□□ -1.38
CD47-203ENST00000398258 RNF135Q8IUD6 432 aa6.44□□□□□ -1.38
CD47-203ENST00000398258 RSPH6AQ9H0K4 717 aa6.44□□□□□ -1.38
CD47-203ENST00000398258 NEURL1BA8MQ27 555 aa6.43□□□□□ -1.38
CD47-203ENST00000398258 FGFR3P22607 806 aa6.43□□□□□ -1.38
CD47-203ENST00000398258 CENPCQ03188 943 aa6.43□□□□□ -1.38
CD47-203ENST00000398258 CHSY3Q70JA7 882 aa6.43□□□□□ -1.38
CD47-203ENST00000398258 FHDC1Q9C0D6 1143 aaPredicted RBP6.43□□□□□ -1.38
CD47-203ENST00000398258 DNAAF2Q9NVR5 837 aaKnown RBP6.43□□□□□ -1.38
CD47-203ENST00000398258 ATXN7L1Q9ULK2 861 aaPredicted RBP6.43□□□□□ -1.38
CD47-203ENST00000398258 PCDHB9Q9Y5E1 797 aa6.43□□□□□ -1.38
CD47-203ENST00000398258 A0A1B0GTH6 734 aa6.42□□□□□ -1.38
CD47-203ENST00000398258 FBXO45P0C2W1 286 aa6.42□□□□□ -1.38
CD47-203ENST00000398258 MSX1P28360 303 aa6.42□□□□□ -1.38
CD47-203ENST00000398258 SKIV2LQ15477 1246 aaKnown RBP6.42□□□□□ -1.38
CD47-203ENST00000398258 C4orf17Q53FE4 359 aa6.42□□□□□ -1.38
CD47-203ENST00000398258 TPSG1Q9NRR2 321 aa6.42□□□□□ -1.38
CD47-203ENST00000398258 PHF24Q9UPV7 400 aa6.42□□□□□ -1.38
CD47-203ENST00000398258 STAU1O95793 577 aaKnown RBP6.41□□□□□ -1.38
CD47-203ENST00000398258 GATA4P43694 442 aa6.41□□□□□ -1.38
CD47-203ENST00000398258 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
CD47-203ENST00000398258 CYP2U1Q7Z449 544 aa6.41□□□□□ -1.38
CD47-203ENST00000398258 FCHSD1Q86WN1 690 aa6.41□□□□□ -1.38
CD47-203ENST00000398258 CNKSR1Q969H4 720 aa6.41□□□□□ -1.38
CD47-203ENST00000398258 SLC24A3Q9HC58 644 aa6.41□□□□□ -1.38
CD47-203ENST00000398258 ARAFP10398 606 aa6.4□□□□□ -1.38
CD47-203ENST00000398258 ESYT1Q9BSJ8 1104 aa6.4□□□□□ -1.38
CD47-203ENST00000398258 PCDHB11Q9Y5F2 797 aa6.4□□□□□ -1.38
CD47-203ENST00000398258 PAX4O43316 350 aa6.39□□□□□ -1.39
CD47-203ENST00000398258 DYRK3O43781 588 aa6.39□□□□□ -1.39
CD47-203ENST00000398258 SH3D19Q5HYK7 790 aa6.39□□□□□ -1.39
CD47-203ENST00000398258 PLVAPQ9BX97 442 aa6.39□□□□□ -1.39
CD47-203ENST00000398258 NOP53Q9NZM5 478 aaKnown RBP6.39□□□□□ -1.39
CD47-203ENST00000398258 ZBBXA8MT70 800 aa6.38□□□□□ -1.39
CD47-203ENST00000398258 LBRQ14739 615 aaKnown RBP6.38□□□□□ -1.39
CD47-203ENST00000398258 ZSCAN10Q96SZ4 725 aaPredicted RBP6.38□□□□□ -1.39
CD47-203ENST00000398258 CDCA7Q9BWT1 371 aaPredicted RBP6.38□□□□□ -1.39
CD47-203ENST00000398258 HYAL3O43820 417 aaPredicted RBP6.37□□□□□ -1.39
CD47-203ENST00000398258 LRP8Q14114 963 aa6.37□□□□□ -1.39
CD47-203ENST00000398258 PRSS36Q5K4E3 855 aa6.36□□□□□ -1.39
CD47-203ENST00000398258 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
CD47-203ENST00000398258 GJD4Q96KN9 370 aaPredicted RBP6.36□□□□□ -1.39
CD47-203ENST00000398258 ZCCHC2Q9C0B9 1178 aaKnown RBP6.36□□□□□ -1.39
CD47-203ENST00000398258 CRISPLD1Q9H336 500 aa6.36□□□□□ -1.39
CD47-203ENST00000398258 COL17A1Q9UMD9 1497 aaPredicted RBP6.35□□□□□ -1.39
CD47-203ENST00000398258 PIK3R2O00459 728 aa6.35□□□□□ -1.39
CD47-203ENST00000398258 GPR37L1O60883 481 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms