RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 KDRP35968 1356 aa22.33■■□□□ 1.17
CLTA-203ENST00000396603 ATP6V1AP38606 617 aa22.32■■□□□ 1.16
CLTA-203ENST00000396603 TNNT2P45379 298 aaPredicted RBP22.32■■□□□ 1.16
CLTA-203ENST00000396603 ATG3Q9NT62 314 aa22.32■■□□□ 1.16
CLTA-203ENST00000396603 AMIGO3Q86WK7 504 aa22.31■■□□□ 1.16
CLTA-203ENST00000396603 ITPK1Q13572 414 aa22.3■■□□□ 1.16
CLTA-203ENST00000396603 GNPATO15228 680 aa22.29■■□□□ 1.16
CLTA-203ENST00000396603 PHF14O94880 888 aa22.29■■□□□ 1.16
CLTA-203ENST00000396603 RC3H1Q5TC82 1133 aaKnown RBP22.29■■□□□ 1.16
CLTA-203ENST00000396603 MORC1Q86VD1 984 aa22.29■■□□□ 1.16
CLTA-203ENST00000396603 GIGYF1O75420 1035 aaPredicted RBP22.28■■□□□ 1.16
CLTA-203ENST00000396603 ADRA2BP18089 450 aa22.28■■□□□ 1.16
CLTA-203ENST00000396603 KNSTRNQ9Y448 316 aa22.27■■□□□ 1.16
CLTA-203ENST00000396603 KDM6AO15550 1401 aaPredicted RBP22.26■■□□□ 1.15
CLTA-203ENST00000396603 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
CLTA-203ENST00000396603 CNTNAP4Q9C0A0 1308 aa22.26■■□□□ 1.15
CLTA-203ENST00000396603 ZNF530Q6P9A1 599 aaPredicted RBP22.25■■□□□ 1.15
CLTA-203ENST00000396603 C1orf141Q5JVX7 400 aa22.24■■□□□ 1.15
CLTA-203ENST00000396603 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
CLTA-203ENST00000396603 NLGN1Q8N2Q7 840 aa22.24■■□□□ 1.15
CLTA-203ENST00000396603 CABP4P57796 275 aa22.23■■□□□ 1.15
CLTA-203ENST00000396603 ADCY9O60503 1353 aa22.23■■□□□ 1.15
CLTA-203ENST00000396603 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
CLTA-203ENST00000396603 CICQ96RK0 1608 aaPredicted RBP22.22■■□□□ 1.15
CLTA-203ENST00000396603 MTHFSP49914 203 aa22.22■■□□□ 1.15
CLTA-203ENST00000396603 SLC4A9Q96Q91 983 aa22.22■■□□□ 1.15
CLTA-203ENST00000396603 SENP3-EIF4A1A0A087X0R7 540 aa22.21■■□□□ 1.15
CLTA-203ENST00000396603 RPS6KA4O75676 772 aa22.2■■□□□ 1.14
CLTA-203ENST00000396603 IL13P35225 146 aa22.2■■□□□ 1.14
CLTA-203ENST00000396603 TGFB2P61812 414 aa22.2■■□□□ 1.14
CLTA-203ENST00000396603 AMER1Q5JTC6 1135 aaPredicted RBP22.2■■□□□ 1.14
CLTA-203ENST00000396603 RBM42Q9BTD8 480 aaKnown RBP22.2■■□□□ 1.14
CLTA-203ENST00000396603 ATP10DQ9P241 1426 aa22.2■■□□□ 1.14
CLTA-203ENST00000396603 MMP10P09238 476 aa22.19■■□□□ 1.14
CLTA-203ENST00000396603 SULT6B1Q6IMI4 303 aa22.19■■□□□ 1.14
CLTA-203ENST00000396603 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
CLTA-203ENST00000396603 AEBP1Q8IUX7 1158 aa22.19■■□□□ 1.14
CLTA-203ENST00000396603 KIF13BQ9NQT8 1826 aa22.19■■□□□ 1.14
CLTA-203ENST00000396603 C10orf71Q711Q0 1435 aa22.17■■□□□ 1.14
CLTA-203ENST00000396603 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
CLTA-203ENST00000396603 RFC4P35249 363 aa22.16■■□□□ 1.14
CLTA-203ENST00000396603 AKAP4Q5JQC9 854 aa22.16■■□□□ 1.14
CLTA-203ENST00000396603 PXDNLA1KZ92 1463 aa22.15■■□□□ 1.14
CLTA-203ENST00000396603 KIF7Q2M1P5 1343 aa22.15■■□□□ 1.14
CLTA-203ENST00000396603 GYS1P13807 737 aa22.15■■□□□ 1.14
CLTA-203ENST00000396603 NFATC2IPQ8NCF5 419 aa22.14■■□□□ 1.13
CLTA-203ENST00000396603 GPBP1L1Q9HC44 474 aaPredicted RBP22.14■■□□□ 1.13
CLTA-203ENST00000396603 CCDC87Q9NVE4 849 aa22.14■■□□□ 1.13
CLTA-203ENST00000396603 C4AP0C0L4 1744 aa22.13■■□□□ 1.13
CLTA-203ENST00000396603 MRC1P22897 1456 aa22.13■■□□□ 1.13
CLTA-203ENST00000396603 SCN11AQ9UI33 1791 aa22.12■■□□□ 1.13
CLTA-203ENST00000396603 NPC1L1Q9UHC9 1359 aa22.12■■□□□ 1.13
CLTA-203ENST00000396603 KIAA1551Q9HCM1 1747 aa22.11■■□□□ 1.13
CLTA-203ENST00000396603 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
CLTA-203ENST00000396603 PTCD1O75127 700 aaKnown RBP22.11■■□□□ 1.13
CLTA-203ENST00000396603 CRKLP46109 303 aaKnown RBP22.11■■□□□ 1.13
CLTA-203ENST00000396603 PARP3Q9Y6F1 533 aa22.11■■□□□ 1.13
CLTA-203ENST00000396603 SLC52A2Q9HAB3 445 aa22.1■■□□□ 1.13
CLTA-203ENST00000396603 TJP1Q07157 1748 aa22.09■■□□□ 1.13
CLTA-203ENST00000396603 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.13
CLTA-203ENST00000396603 USP42Q9H9J4 1324 aaKnown RBP22.08■■□□□ 1.13
CLTA-203ENST00000396603 ADAMTS7Q9UKP4 1686 aa22.07■■□□□ 1.12
CLTA-203ENST00000396603 DIAPH1O60610 1272 aaKnown RBP22.06■■□□□ 1.12
CLTA-203ENST00000396603 RNMTO43148 476 aaKnown RBP22.05■■□□□ 1.12
CLTA-203ENST00000396603 VSIG10Q8N0Z9 540 aa22.05■■□□□ 1.12
CLTA-203ENST00000396603 INTS5Q6P9B9 1019 aaKnown RBP22.04■■□□□ 1.12
CLTA-203ENST00000396603 BCS1LQ9Y276 419 aa22.04■■□□□ 1.12
CLTA-203ENST00000396603 A0A0G2JLW4 131 aa22.03■■□□□ 1.12
CLTA-203ENST00000396603 DPEP1P16444 411 aa22.02■■□□□ 1.12
CLTA-203ENST00000396603 LGR6Q9HBX8 967 aa22.02■■□□□ 1.12
CLTA-203ENST00000396603 WWC3Q9ULE0 1092 aa22.02■■□□□ 1.12
CLTA-203ENST00000396603 BRCA1P38398 1863 aaKnown RBP22.02■■□□□ 1.12
CLTA-203ENST00000396603 SOS1Q07889 1333 aaPredicted RBP22.02■■□□□ 1.12
CLTA-203ENST00000396603 N4BP2Q86UW6 1770 aaPredicted RBP22.02■■□□□ 1.11
CLTA-203ENST00000396603 KCPQ6ZWJ8 1503 aa22.01■■□□□ 1.11
CLTA-203ENST00000396603 HMOX1P09601 288 aa22.01■■□□□ 1.11
CLTA-203ENST00000396603 FKBP8Q14318 412 aa22.01■■□□□ 1.11
CLTA-203ENST00000396603 MTHFSDQ2M296 383 aaKnown RBP22.01■■□□□ 1.11
CLTA-203ENST00000396603 ZPR1O75312 459 aa22■■□□□ 1.11
CLTA-203ENST00000396603 CYP19A1P11511 503 aaPredicted RBP22■■□□□ 1.11
CLTA-203ENST00000396603 KCNA3P22001 575 aa22■■□□□ 1.11
CLTA-203ENST00000396603 TM4SF1P30408 202 aa22■■□□□ 1.11
CLTA-203ENST00000396603 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
CLTA-203ENST00000396603 PIM2Q9P1W9 311 aa22■■□□□ 1.11
CLTA-203ENST00000396603 SRP68Q9UHB9 627 aaKnown RBP22■■□□□ 1.11
CLTA-203ENST00000396603 COL3A1P02461 1466 aaPredicted RBP22■■□□□ 1.11
CLTA-203ENST00000396603 CEP350Q5VT06 3117 aa21.99■■□□□ 1.11
CLTA-203ENST00000396603 FCHSD2O94868 740 aa21.99■■□□□ 1.11
CLTA-203ENST00000396603 HSPA6P17066 643 aa21.99■■□□□ 1.11
CLTA-203ENST00000396603 ARFGEF1Q9Y6D6 1849 aa21.99■■□□□ 1.11
CLTA-203ENST00000396603 POLRMTO00411 1230 aaKnown RBP21.98■■□□□ 1.11
CLTA-203ENST00000396603 DDR1Q08345 913 aa21.98■■□□□ 1.11
CLTA-203ENST00000396603 CC2D1BQ5T0F9 858 aaKnown RBP21.98■■□□□ 1.11
CLTA-203ENST00000396603 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
CLTA-203ENST00000396603 NARFQ9UHQ1 456 aa21.98■■□□□ 1.11
CLTA-203ENST00000396603 KIF3CO14782 793 aa21.97■■□□□ 1.11
CLTA-203ENST00000396603 GAS2L2Q8NHY3 880 aa21.97■■□□□ 1.11
CLTA-203ENST00000396603 COL15A1P39059 1388 aa21.97■■□□□ 1.11
CLTA-203ENST00000396603 UBR2Q8IWV8 1755 aa21.97■■□□□ 1.11
CLTA-203ENST00000396603 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms