RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 EIF4A1P60842 406 aaKnown RBP25.61■■□□□ 1.69
PRKCD-202ENST00000394729 ERICH6Q7L0X2 663 aa25.61■■□□□ 1.69
PRKCD-202ENST00000394729 SLC4A3P48751 1232 aa25.6■■□□□ 1.69
PRKCD-202ENST00000394729 AIMP1Q12904 312 aaKnown RBP25.6■■□□□ 1.69
PRKCD-202ENST00000394729 LARP1Q6PKG0 1096 aaKnown RBP25.6■■□□□ 1.69
PRKCD-202ENST00000394729 ALS2Q96Q42 1657 aa25.59■■□□□ 1.69
PRKCD-202ENST00000394729 MEGF6O75095 1541 aa25.58■■□□□ 1.69
PRKCD-202ENST00000394729 PROSER3Q2NL68 480 aa25.58■■□□□ 1.69
PRKCD-202ENST00000394729 KAT6BQ8WYB5 2073 aa25.58■■□□□ 1.69
PRKCD-202ENST00000394729 USP54Q70EL1 1684 aa25.57■■□□□ 1.68
PRKCD-202ENST00000394729 CYP27B1O15528 508 aa25.57■■□□□ 1.68
PRKCD-202ENST00000394729 CEMIPQ8WUJ3 1361 aa25.57■■□□□ 1.68
PRKCD-202ENST00000394729 HDAC1Q13547 482 aaPredicted RBP25.57■■□□□ 1.68
PRKCD-202ENST00000394729 SOS2Q07890 1332 aaPredicted RBP25.57■■□□□ 1.68
PRKCD-202ENST00000394729 RGS12O14924 1447 aa25.57■■□□□ 1.68
PRKCD-202ENST00000394729 NCOA3Q9Y6Q9 1424 aa25.56■■□□□ 1.68
PRKCD-202ENST00000394729 A0A0G2JS52 829 aa25.56■■□□□ 1.68
PRKCD-202ENST00000394729 ADAMTS2O95450 1211 aa25.56■■□□□ 1.68
PRKCD-202ENST00000394729 MYL6BP14649 208 aa25.55■■□□□ 1.68
PRKCD-202ENST00000394729 PHKG2P15735 406 aa25.55■■□□□ 1.68
PRKCD-202ENST00000394729 AAMPQ13685 434 aa25.55■■□□□ 1.68
PRKCD-202ENST00000394729 SMARCA5O60264 1052 aaPredicted RBP25.54■■□□□ 1.68
PRKCD-202ENST00000394729 INTS3Q68E01 1043 aaKnown RBP25.54■■□□□ 1.68
PRKCD-202ENST00000394729 SPG7Q9UQ90 795 aa25.54■■□□□ 1.68
PRKCD-202ENST00000394729 PTPRCP08575 1304 aa25.53■■□□□ 1.68
PRKCD-202ENST00000394729 NUTM2BA6NNL0 878 aaPredicted RBP25.53■■□□□ 1.68
PRKCD-202ENST00000394729 NUTM2EB1AL46 878 aaPredicted RBP25.53■■□□□ 1.68
PRKCD-202ENST00000394729 NUTM2AQ8IVF1 878 aaPredicted RBP25.53■■□□□ 1.68
PRKCD-202ENST00000394729 BTG4Q9NY30 223 aa25.53■■□□□ 1.68
PRKCD-202ENST00000394729 PI4KAP2A4QPH2 592 aa25.52■■□□□ 1.68
PRKCD-202ENST00000394729 C16orf71Q8IYS4 520 aaPredicted RBP25.52■■□□□ 1.68
PRKCD-202ENST00000394729 PI4KAP1Q8N8J0 262 aa25.52■■□□□ 1.68
PRKCD-202ENST00000394729 SMC5Q8IY18 1101 aa25.51■■□□□ 1.67
PRKCD-202ENST00000394729 CHD1LQ86WJ1 897 aa25.5■■□□□ 1.67
PRKCD-202ENST00000394729 IFNL2Q8IZJ0 200 aa25.5■■□□□ 1.67
PRKCD-202ENST00000394729 PTCD1O75127 700 aaKnown RBP25.48■■□□□ 1.67
PRKCD-202ENST00000394729 IPO9Q96P70 1041 aaKnown RBP25.48■■□□□ 1.67
PRKCD-202ENST00000394729 CAMTA1Q9Y6Y1 1673 aa25.48■■□□□ 1.67
PRKCD-202ENST00000394729 GIGYF1O75420 1035 aaPredicted RBP25.48■■□□□ 1.67
PRKCD-202ENST00000394729 ZNF496Q96IT1 587 aaPredicted RBP25.48■■□□□ 1.67
PRKCD-202ENST00000394729 EXOC6BQ9Y2D4 811 aa25.48■■□□□ 1.67
PRKCD-202ENST00000394729 PHRF1Q9P1Y6 1649 aaKnown RBP25.48■■□□□ 1.67
PRKCD-202ENST00000394729 CEP85Q6P2H3 762 aa25.47■■□□□ 1.67
PRKCD-202ENST00000394729 ZNF790Q6PG37 636 aa25.47■■□□□ 1.67
PRKCD-202ENST00000394729 OTUD7AQ8TE49 926 aaPredicted RBP25.47■■□□□ 1.67
PRKCD-202ENST00000394729 SLC52A2Q9HAB3 445 aa25.47■■□□□ 1.67
PRKCD-202ENST00000394729 CABP4P57796 275 aa25.47■■□□□ 1.67
PRKCD-202ENST00000394729 NUCB1Q02818 461 aa25.46■■□□□ 1.67
PRKCD-202ENST00000394729 ZBTB47Q9UFB7 747 aaPredicted RBP25.46■■□□□ 1.67
PRKCD-202ENST00000394729 WDR17Q8IZU2 1322 aa25.46■■□□□ 1.67
PRKCD-202ENST00000394729 LRRFIP2Q9Y608 721 aaKnown RBP25.45■■□□□ 1.67
PRKCD-202ENST00000394729 KDM6AO15550 1401 aaPredicted RBP25.45■■□□□ 1.67
PRKCD-202ENST00000394729 TTC5Q8N0Z6 440 aa25.45■■□□□ 1.66
PRKCD-202ENST00000394729 ZNF330Q9Y3S2 320 aaPredicted RBP25.45■■□□□ 1.66
PRKCD-202ENST00000394729 MFAP1P55081 439 aaKnown RBP25.44■■□□□ 1.66
PRKCD-202ENST00000394729 USP16Q9Y5T5 823 aa25.44■■□□□ 1.66
PRKCD-202ENST00000394729 TSHZ3Q63HK5 1081 aa25.44■■□□□ 1.66
PRKCD-202ENST00000394729 ZCRB1Q8TBF4 217 aaKnown RBP25.44■■□□□ 1.66
PRKCD-202ENST00000394729 JARID2Q92833 1246 aaPredicted RBP25.44■■□□□ 1.66
PRKCD-202ENST00000394729 CHMP4BQ9H444 224 aaKnown RBP25.44■■□□□ 1.66
PRKCD-202ENST00000394729 CCT4P50991 539 aaKnown RBP25.43■■□□□ 1.66
PRKCD-202ENST00000394729 CWF19L2Q2TBE0 894 aaKnown RBP25.43■■□□□ 1.66
PRKCD-202ENST00000394729 NOP58Q9Y2X3 529 aaKnown RBP25.43■■□□□ 1.66
PRKCD-202ENST00000394729 PNMA6EA0A0J9YXQ4 647 aa25.43■■□□□ 1.66
PRKCD-202ENST00000394729 NBPF7P0C2Y1 421 aaPredicted RBP25.42■■□□□ 1.66
PRKCD-202ENST00000394729 LRRC37A3O60309 1634 aa25.41■■□□□ 1.66
PRKCD-202ENST00000394729 SYTL4Q96C24 671 aaPredicted RBP25.41■■□□□ 1.66
PRKCD-202ENST00000394729 MAP3K2Q9Y2U5 619 aa25.41■■□□□ 1.66
PRKCD-202ENST00000394729 IL2RBP14784 551 aa25.4■■□□□ 1.66
PRKCD-202ENST00000394729 ANKRD44Q8N8A2 993 aa25.4■■□□□ 1.66
PRKCD-202ENST00000394729 CPDO75976 1380 aa25.4■■□□□ 1.66
PRKCD-202ENST00000394729 ARXQ96QS3 562 aa25.4■■□□□ 1.66
PRKCD-202ENST00000394729 USP44Q9H0E7 712 aa25.4■■□□□ 1.66
PRKCD-202ENST00000394729 DBF4Q9UBU7 674 aaPredicted RBP25.4■■□□□ 1.66
PRKCD-202ENST00000394729 GNAI2P04899 355 aa25.39■■□□□ 1.66
PRKCD-202ENST00000394729 DCAF5Q96JK2 942 aa25.39■■□□□ 1.66
PRKCD-202ENST00000394729 NBR1Q14596 966 aa25.39■■□□□ 1.65
PRKCD-202ENST00000394729 UBTFL1P0CB47 393 aaPredicted RBP25.38■■□□□ 1.65
PRKCD-202ENST00000394729 DNAAF4Q8WXU2 420 aa25.38■■□□□ 1.65
PRKCD-202ENST00000394729 GCC1Q96CN9 775 aa25.38■■□□□ 1.65
PRKCD-202ENST00000394729 SRCIN1Q9C0H9 1055 aa25.38■■□□□ 1.65
PRKCD-202ENST00000394729 RTL5Q5HYW3 569 aaPredicted RBP25.38■■□□□ 1.65
PRKCD-202ENST00000394729 CCDC9Q9Y3X0 531 aaKnown RBP25.38■■□□□ 1.65
PRKCD-202ENST00000394729 COL18A1P39060 1754 aa25.38■■□□□ 1.65
PRKCD-202ENST00000394729 COL5A2P05997 1499 aaPredicted RBP25.37■■□□□ 1.65
PRKCD-202ENST00000394729 BABAM1Q9NWV8 329 aa25.37■■□□□ 1.65
PRKCD-202ENST00000394729 ATP10DQ9P241 1426 aa25.37■■□□□ 1.65
PRKCD-202ENST00000394729 NCAPD2Q15021 1401 aa25.36■■□□□ 1.65
PRKCD-202ENST00000394729 DCTPP1Q9H773 170 aa25.34■■□□□ 1.65
PRKCD-202ENST00000394729 COPS6Q7L5N1 327 aa25.34■■□□□ 1.65
PRKCD-202ENST00000394729 RPAP2Q8IXW5 612 aaPredicted RBP25.34■■□□□ 1.65
PRKCD-202ENST00000394729 IL1RAPL2Q9NP60 686 aa25.34■■□□□ 1.65
PRKCD-202ENST00000394729 RIC3Q7Z5B4 369 aa25.33■■□□□ 1.65
PRKCD-202ENST00000394729 XAGE3Q8WTP9 111 aa25.33■■□□□ 1.65
PRKCD-202ENST00000394729 C9orf78Q9NZ63 289 aaPredicted RBP25.33■■□□□ 1.65
PRKCD-202ENST00000394729 LMO7Q8WWI1 1683 aa25.33■■□□□ 1.64
PRKCD-202ENST00000394729 ADCY9O60503 1353 aa25.32■■□□□ 1.64
PRKCD-202ENST00000394729 CARD10Q9BWT7 1032 aa25.32■■□□□ 1.64
PRKCD-202ENST00000394729 FAM208AQ9UK61 1670 aaKnown RBP25.32■■□□□ 1.64
PRKCD-202ENST00000394729 GNAI3P08754 354 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms