RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 SERTAD1Q9UHV2 236 aa6.79□□□□□ -1.32
MDM2-208ENST00000393410 TLR1Q15399 786 aa6.78□□□□□ -1.32
MDM2-208ENST00000393410 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.78□□□□□ -1.32
MDM2-208ENST00000393410 CUEDC1Q9NWM3 386 aaPredicted RBP6.78□□□□□ -1.32
MDM2-208ENST00000393410 USP3Q9Y6I4 520 aa6.78□□□□□ -1.32
MDM2-208ENST00000393410 VSIG8P0DPA2 414 aa6.77□□□□□ -1.33
MDM2-208ENST00000393410 ITGA6P23229 1130 aa6.77□□□□□ -1.33
MDM2-208ENST00000393410 GMPRP36959 345 aa6.77□□□□□ -1.33
MDM2-208ENST00000393410 CFAP70Q5T0N1 1121 aa6.77□□□□□ -1.33
MDM2-208ENST00000393410 KANK4Q5T7N3 995 aaPredicted RBP6.77□□□□□ -1.33
MDM2-208ENST00000393410 GPR161Q8N6U8 529 aaKnown RBP6.77□□□□□ -1.33
MDM2-208ENST00000393410 IRF7Q92985 503 aa6.77□□□□□ -1.33
MDM2-208ENST00000393410 SLC4A9Q96Q91 983 aa6.77□□□□□ -1.33
MDM2-208ENST00000393410 ZNF358Q9NW07 568 aa6.77□□□□□ -1.33
MDM2-208ENST00000393410 DKK1O94907 266 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 LMOD1P29536 600 aaPredicted RBP6.76□□□□□ -1.33
MDM2-208ENST00000393410 PHKA2P46019 1235 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 SMTNP53814 917 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 PSME1Q06323 249 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 C4orf17Q53FE4 359 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 TAS1R3Q7RTX0 852 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 TRIM50Q86XT4 487 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 PPARGC1BQ86YN6 1023 aaKnown RBP6.76□□□□□ -1.33
MDM2-208ENST00000393410 OGFOD1Q8N543 542 aa6.76□□□□□ -1.33
MDM2-208ENST00000393410 WIPF1O43516 503 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 MTFR1Q15390 333 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 WDR44Q5JSH3 913 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 CCDC102BQ68D86 513 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 TMEM214Q6NUQ4 689 aaKnown RBP6.75□□□□□ -1.33
MDM2-208ENST00000393410 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 VWA5B2Q8N398 1253 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 TPCN2Q8NHX9 752 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 NANOS1Q8WY41 292 aaKnown RBP6.75□□□□□ -1.33
MDM2-208ENST00000393410 TIMMDC1Q9NPL8 285 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 DNAAF2Q9NVR5 837 aaKnown RBP6.75□□□□□ -1.33
MDM2-208ENST00000393410 IQSEC3Q9UPP2 1182 aaPredicted RBP6.75□□□□□ -1.33
MDM2-208ENST00000393410 DYRK1BQ9Y463 629 aa6.75□□□□□ -1.33
MDM2-208ENST00000393410 A6NJY4 79 aa6.74□□□□□ -1.33
MDM2-208ENST00000393410 ARID3CA6NKF2 412 aa6.74□□□□□ -1.33
MDM2-208ENST00000393410 ATP1A2P50993 1020 aa6.74□□□□□ -1.33
MDM2-208ENST00000393410 RHBDD1Q8TEB9 315 aa6.74□□□□□ -1.33
MDM2-208ENST00000393410 ZNF594Q96JF6 807 aaPredicted RBP6.74□□□□□ -1.33
MDM2-208ENST00000393410 GAS2L1Q99501 681 aaPredicted RBP6.74□□□□□ -1.33
MDM2-208ENST00000393410 CDC14CA4D256 554 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 THBS1P07996 1170 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 RASA1P20936 1047 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 EPHA4P54764 986 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 KRT76Q01546 638 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 DBN1Q16643 649 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 CRTC2Q53ET0 693 aaPredicted RBP6.73□□□□□ -1.33
MDM2-208ENST00000393410 GNASQ5JWF2 1037 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 LARGE2Q8N3Y3 721 aa6.73□□□□□ -1.33
MDM2-208ENST00000393410 SFI1A8K8P3 1242 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 CDK2AP1O14519 115 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 BACH1O14867 736 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 RFX1P22670 979 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 FOXK2Q01167 660 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 PTK7Q13308 1070 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 RIPOR1Q6ZS17 1223 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 C14orf37Q86TY3 774 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 TNS4Q8IZW8 715 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 SIX5Q8N196 739 aa6.72□□□□□ -1.33
MDM2-208ENST00000393410 ZNF837Q96EG3 531 aaPredicted RBP6.72□□□□□ -1.33
MDM2-208ENST00000393410 SCHIP1Q9P0W5 487 aaPredicted RBP6.72□□□□□ -1.33
MDM2-208ENST00000393410 F11P03951 625 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.34
MDM2-208ENST00000393410 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
MDM2-208ENST00000393410 PLA2G4AP47712 749 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 CDCA8Q53HL2 280 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 RNFT1Q5M7Z0 435 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 TBCELQ5QJ74 424 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 SV2AQ7L0J3 742 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 GPAMQ9HCL2 828 aa6.71□□□□□ -1.34
MDM2-208ENST00000393410 A0A1B0GTH6 734 aa6.7□□□□□ -1.34
MDM2-208ENST00000393410 MSX1P28360 303 aa6.7□□□□□ -1.34
MDM2-208ENST00000393410 TSEN2Q8NCE0 465 aaKnown RBP6.7□□□□□ -1.34
MDM2-208ENST00000393410 ZDHHC1Q8WTX9 485 aa6.7□□□□□ -1.34
MDM2-208ENST00000393410 COL25A1Q9BXS0 654 aaPredicted RBP6.7□□□□□ -1.34
MDM2-208ENST00000393410 NIFKQ9BYG3 293 aaKnown RBP6.7□□□□□ -1.34
MDM2-208ENST00000393410 C1orf115Q9H7X2 142 aa6.7□□□□□ -1.34
MDM2-208ENST00000393410 VRTNQ9H8Y1 702 aa6.7□□□□□ -1.34
MDM2-208ENST00000393410 USP17L15C9J2P7 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L10C9JJH3 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L13C9JLJ4 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L12C9JPN9 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L11C9JVI0 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L21D6R901 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L18D6R9N7 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L22D6RA61 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L17D6RBQ6 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L19D6RCP7 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L20D6RJB6 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 SRPK2P78362 688 aaKnown RBP6.69□□□□□ -1.34
MDM2-208ENST00000393410 USP17L24Q0WX57 530 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 DPYDQ12882 1025 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 LARP1Q6PKG0 1096 aaKnown RBP6.69□□□□□ -1.34
MDM2-208ENST00000393410 SLC9A9Q8IVB4 645 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 PARP3Q9Y6F1 533 aa6.69□□□□□ -1.34
MDM2-208ENST00000393410 FAM196BA6NMK8 535 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms