RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 TPD52P55327 224 aaPredicted RBP14.34□□□□□ -0.11
SMARCA2-209ENST00000382203 CCDC83Q8IWF9 413 aa14.34□□□□□ -0.11
SMARCA2-209ENST00000382203 LMNTD2Q8IXW0 634 aa14.34□□□□□ -0.11
SMARCA2-209ENST00000382203 PRIMPOLQ96LW4 560 aa14.34□□□□□ -0.11
SMARCA2-209ENST00000382203 WDR33Q9C0J8 1336 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-209ENST00000382203 USO1O60763 962 aaKnown RBP14.33□□□□□ -0.11
SMARCA2-209ENST00000382203 RAB3IL1Q8TBN0 382 aa14.33□□□□□ -0.11
SMARCA2-209ENST00000382203 CFAP58Q5T655 872 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 TTC36A6NLP5 189 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 TTC39AQ5SRH9 613 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 ANKS4BQ8N8V4 417 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 ZNF397Q8NF99 534 aaPredicted RBP14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 SEPT8Q92599 483 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 PSMD1Q99460 953 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 GNL3LQ9NVN8 582 aaKnown RBP14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 USP47Q96K76 1375 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 CASQ2O14958 399 aaPredicted RBP14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 FMNL3Q8IVF7 1028 aa14.33□□□□□ -0.12
SMARCA2-209ENST00000382203 PPP1R12BO60237 982 aaPredicted RBP14.32□□□□□ -0.12
SMARCA2-209ENST00000382203 HSF2BPO75031 334 aa14.32□□□□□ -0.12
SMARCA2-209ENST00000382203 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
SMARCA2-209ENST00000382203 STMN1P16949 149 aa14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 PCK1P35558 622 aa14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 MAP3K9P80192 1104 aa14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 PPP1R14CQ8TAE6 165 aa14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 NLRP2Q9NX02 1062 aa14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 WDR63Q8IWG1 891 aa14.31□□□□□ -0.12
SMARCA2-209ENST00000382203 MORC4Q8TE76 937 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.3□□□□□ -0.127e-7■■■■■ 31.5
SMARCA2-209ENST00000382203 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 TRMT1Q9NXH9 659 aaKnown RBP14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 WHAMMP3Q1A5X7 153 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 CCDC30Q5VVM6 783 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 RAPGEF2Q9Y4G8 1499 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 MCM5P33992 734 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 MAP2K2P36507 400 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 SYCE3A1L190 88 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 ERCC3P19447 782 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 DBN1Q16643 649 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 CEP128Q6ZU80 1094 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 ZC4H2Q9NQZ6 224 aa14.3□□□□□ -0.12
SMARCA2-209ENST00000382203 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 LACTBP83111 547 aaPredicted RBP14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 CTNNBL1Q8WYA6 563 aaPredicted RBP14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 GCKP35557 465 aa14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 DNA2P51530 1060 aa14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 MYCBPQ99417 103 aaPredicted RBP14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 MAP3K11Q16584 847 aa14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 ARFGAP3Q9NP61 516 aa14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 DHX57Q6P158 1386 aaKnown RBP14.29□□□□□ -0.12
SMARCA2-209ENST00000382203 SH2D4BQ5SQS7 431 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 CTAGE6Q86UF2 777 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 SMG6Q86US8 1419 aaKnown RBP14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 GNAI3P08754 354 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 SMAP1Q8IYB5 467 aaPredicted RBP14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 TMCO4Q5TGY1 634 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 CCDC94Q9BW85 323 aaPredicted RBP14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 NEMFO60524 1076 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 CACNA2D3Q8IZS8 1091 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 LRRC43Q8N309 656 aa14.28□□□□□ -0.12
SMARCA2-209ENST00000382203 PSMC4P43686 418 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 ZBTB16Q05516 673 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 SPATA32Q96LK8 384 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 VCX3BQ9H321 246 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 PAXBP1Q9Y5B6 917 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 A0A1W2PRG0 241 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 POTEJP0CG39 1038 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 CCDC96Q2M329 555 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 CCDC155Q8N6L0 562 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 PRKRIP1Q9H875 184 aaPredicted RBP14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 COMMD10Q9Y6G5 202 aa14.27□□□□□ -0.12
SMARCA2-209ENST00000382203 IGSF3O75054 1194 aa14.27□□□□□ -0.13
SMARCA2-209ENST00000382203 HMOX1P09601 288 aa14.27□□□□□ -0.13
SMARCA2-209ENST00000382203 CNNM1Q9NRU3 951 aa14.27□□□□□ -0.13
SMARCA2-209ENST00000382203 MIER3Q7Z3K6 550 aa14.27□□□□□ -0.13
SMARCA2-209ENST00000382203 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
SMARCA2-209ENST00000382203 CLIP2Q9UDT6 1046 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 IKBKGQ9Y6K9 419 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 TOP1P11387 765 aaKnown RBP14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 PRR16Q569H4 304 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 CIZ1Q9ULV3 898 aaPredicted RBP14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 CCDC69A6NI79 296 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 CHMP2AO43633 222 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 TRIM21P19474 475 aaKnown RBP14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 MCM6Q14566 821 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 KIF20AO95235 890 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 SSBP05455 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 ATP2B2Q01814 1243 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 MACROD2A1Z1Q3 448 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 RPAINQ86UA6 219 aa14.26□□□□□ -0.13
SMARCA2-209ENST00000382203 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 SPTY2D1Q68D10 685 aaPredicted RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 ZNF365Q70YC5 407 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 NACAP1Q9BZK3 213 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms