RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 JCADQ9P266 1359 aa33.58■■■□□ 2.97
ATPAF1-202ENST00000371937 NUTM2BA6NNL0 878 aaPredicted RBP33.57■■■□□ 2.96
ATPAF1-202ENST00000371937 NUTM2EB1AL46 878 aaPredicted RBP33.57■■■□□ 2.96
ATPAF1-202ENST00000371937 NUTM2AQ8IVF1 878 aaPredicted RBP33.57■■■□□ 2.96
ATPAF1-202ENST00000371937 KDM3BQ7LBC6 1761 aa33.57■■■□□ 2.96
ATPAF1-202ENST00000371937 SCN11AQ9UI33 1791 aa33.57■■■□□ 2.96
ATPAF1-202ENST00000371937 KDM6AO15550 1401 aaPredicted RBP33.57■■■□□ 2.96
ATPAF1-202ENST00000371937 TCERG1O14776 1098 aaKnown RBP33.56■■■□□ 2.96
ATPAF1-202ENST00000371937 MVPQ14764 893 aaKnown RBP33.55■■■□□ 2.96
ATPAF1-202ENST00000371937 USP35Q9P2H5 1018 aa33.55■■■□□ 2.96
ATPAF1-202ENST00000371937 EIF4A1P60842 406 aaKnown RBP33.54■■■□□ 2.96
ATPAF1-202ENST00000371937 CHMP4AQ9BY43 222 aa33.54■■■□□ 2.96
ATPAF1-202ENST00000371937 SLC52A2Q9HAB3 445 aa33.54■■■□□ 2.96
ATPAF1-202ENST00000371937 PLCH1Q4KWH8 1693 aa33.54■■■□□ 2.96
ATPAF1-202ENST00000371937 SIPA1L3O60292 1781 aaPredicted RBP33.54■■■□□ 2.96
ATPAF1-202ENST00000371937 HOXB7P09629 217 aa33.52■■■□□ 2.96
ATPAF1-202ENST00000371937 CCDC30Q5VVM6 783 aa33.52■■■□□ 2.96
ATPAF1-202ENST00000371937 API5Q9BZZ5 524 aaKnown RBP33.51■■■□□ 2.96
ATPAF1-202ENST00000371937 STK31Q9BXU1 1019 aa33.51■■■□□ 2.95
ATPAF1-202ENST00000371937 SLC4A2P04920 1241 aa33.49■■■□□ 2.95
ATPAF1-202ENST00000371937 DDX19BQ9UMR2 479 aa33.49■■■□□ 2.95
ATPAF1-202ENST00000371937 MRC1P22897 1456 aa33.48■■■□□ 2.95
ATPAF1-202ENST00000371937 NKX1-1Q15270 411 aaPredicted RBP33.48■■■□□ 2.95
ATPAF1-202ENST00000371937 PTPRCP08575 1304 aa33.47■■■□□ 2.95
ATPAF1-202ENST00000371937 NFATC2IPQ8NCF5 419 aa33.47■■■□□ 2.95
ATPAF1-202ENST00000371937 KCNQ3O43525 872 aa33.46■■■□□ 2.95
ATPAF1-202ENST00000371937 ITPRIPQ8IWB1 547 aa33.46■■■□□ 2.95
ATPAF1-202ENST00000371937 TMEM57Q8N5G2 664 aa33.46■■■□□ 2.95
ATPAF1-202ENST00000371937 NRAPQ86VF7 1730 aa33.46■■■□□ 2.95
ATPAF1-202ENST00000371937 NWD2Q9ULI1 1742 aa33.46■■■□□ 2.95
ATPAF1-202ENST00000371937 DISP2A7MBM2 1401 aa33.45■■■□□ 2.95
ATPAF1-202ENST00000371937 SPATA31A6Q5VVP1 1343 aa33.45■■■□□ 2.94
ATPAF1-202ENST00000371937 CABP4P57796 275 aa33.44■■■□□ 2.94
ATPAF1-202ENST00000371937 DDX54Q8TDD1 881 aaKnown RBP33.44■■■□□ 2.94
ATPAF1-202ENST00000371937 SLIT2O94813 1529 aa33.44■■■□□ 2.94
ATPAF1-202ENST00000371937 THRAP3Q9Y2W1 955 aaKnown RBP33.44■■■□□ 2.94
ATPAF1-202ENST00000371937 ABCC4O15439 1325 aa33.43■■■□□ 2.94
ATPAF1-202ENST00000371937 HDGFL1Q5TGJ6 251 aa33.43■■■□□ 2.94
ATPAF1-202ENST00000371937 ERVV-2B6SEH9 535 aa33.42■■■□□ 2.94
ATPAF1-202ENST00000371937 ZNF790Q6PG37 636 aa33.42■■■□□ 2.94
ATPAF1-202ENST00000371937 CDCA7Q9BWT1 371 aaPredicted RBP33.42■■■□□ 2.94
ATPAF1-202ENST00000371937 SHANK3Q9BYB0 1731 aa33.42■■■□□ 2.94
ATPAF1-202ENST00000371937 CHMP4BQ9H444 224 aaKnown RBP33.42■■■□□ 2.94
ATPAF1-202ENST00000371937 HEG1Q9ULI3 1381 aa33.41■■■□□ 2.94
ATPAF1-202ENST00000371937 SPATA31A1Q5TZJ5 1347 aa33.4■■■□□ 2.94
ATPAF1-202ENST00000371937 CACNA1FO60840 1977 aa33.4■■■□□ 2.94
ATPAF1-202ENST00000371937 GIGYF1O75420 1035 aaPredicted RBP33.38■■■□□ 2.93
ATPAF1-202ENST00000371937 CENPQQ7L2Z9 268 aaPredicted RBP33.37■■■□□ 2.93
ATPAF1-202ENST00000371937 TTC5Q8N0Z6 440 aa33.37■■■□□ 2.93
ATPAF1-202ENST00000371937 NECTIN2Q92692 538 aa33.37■■■□□ 2.93
ATPAF1-202ENST00000371937 EXOC5O00471 708 aa33.36■■■□□ 2.93
ATPAF1-202ENST00000371937 EIF2S2P20042 333 aaKnown RBP33.35■■■□□ 2.93
ATPAF1-202ENST00000371937 SLC39A6Q13433 755 aa33.35■■■□□ 2.93
ATPAF1-202ENST00000371937 NGLY1Q96IV0 654 aa33.35■■■□□ 2.93
ATPAF1-202ENST00000371937 SPATA31A5Q5VU36 1347 aa33.35■■■□□ 2.93
ATPAF1-202ENST00000371937 SPATA31A7Q8IWB4 1347 aa33.35■■■□□ 2.93
ATPAF1-202ENST00000371937 UNC5CLQ8IV45 518 aa33.35■■■□□ 2.93
ATPAF1-202ENST00000371937 KDM2BQ8NHM5 1336 aa33.34■■■□□ 2.93
ATPAF1-202ENST00000371937 WNK3Q9BYP7 1800 aa33.34■■■□□ 2.93
ATPAF1-202ENST00000371937 C8orf37Q96NL8 207 aa33.34■■■□□ 2.93
ATPAF1-202ENST00000371937 RGS12O14924 1447 aa33.34■■■□□ 2.93
ATPAF1-202ENST00000371937 HSPA1LP34931 641 aa33.33■■■□□ 2.93
ATPAF1-202ENST00000371937 G2E3Q7L622 706 aa33.33■■■□□ 2.93
ATPAF1-202ENST00000371937 FLIIQ13045 1269 aa33.32■■■□□ 2.93
ATPAF1-202ENST00000371937 INTS3Q68E01 1043 aaKnown RBP33.32■■■□□ 2.93
ATPAF1-202ENST00000371937 ZBTB40Q9NUA8 1239 aa33.32■■■□□ 2.92
ATPAF1-202ENST00000371937 CCDC9Q9Y3X0 531 aaKnown RBP33.31■■■□□ 2.92
ATPAF1-202ENST00000371937 BARGINQ6ZT62 677 aa33.3■■■□□ 2.92
ATPAF1-202ENST00000371937 FMNL2Q96PY5 1086 aa33.3■■■□□ 2.92
ATPAF1-202ENST00000371937 TNS2Q63HR2 1409 aa33.29■■■□□ 2.92
ATPAF1-202ENST00000371937 FNBP4Q8N3X1 1017 aaPredicted RBP33.29■■■□□ 2.92
ATPAF1-202ENST00000371937 DBF4Q9UBU7 674 aaPredicted RBP33.29■■■□□ 2.92
ATPAF1-202ENST00000371937 PCDHB15Q9Y5E8 787 aa33.29■■■□□ 2.92
ATPAF1-202ENST00000371937 ZBTB7BO15156 539 aaPredicted RBP33.28■■■□□ 2.92
ATPAF1-202ENST00000371937 FKBP5Q13451 457 aaPredicted RBP33.28■■■□□ 2.92
ATPAF1-202ENST00000371937 ZNF496Q96IT1 587 aaPredicted RBP33.28■■■□□ 2.92
ATPAF1-202ENST00000371937 CHPF2Q9P2E5 772 aa33.28■■■□□ 2.92
ATPAF1-202ENST00000371937 BCL9LQ86UU0 1499 aa33.26■■■□□ 2.92
ATPAF1-202ENST00000371937 SNRPA1P09661 255 aaKnown RBP33.26■■■□□ 2.92
ATPAF1-202ENST00000371937 VPS72Q15906 364 aa33.25■■■□□ 2.91
ATPAF1-202ENST00000371937 LRP6O75581 1613 aa33.25■■■□□ 2.91
ATPAF1-202ENST00000371937 DDB1Q16531 1140 aa33.25■■■□□ 2.91
ATPAF1-202ENST00000371937 RWDD1Q9H446 243 aaPredicted RBP33.25■■■□□ 2.91
ATPAF1-202ENST00000371937 TMOD3Q9NYL9 352 aa33.25■■■□□ 2.91
ATPAF1-202ENST00000371937 CCT4P50991 539 aaKnown RBP33.23■■■□□ 2.91
ATPAF1-202ENST00000371937 IGHDP01880 384 aa33.23■■■□□ 2.91
ATPAF1-202ENST00000371937 PRAMEF22A3QJZ6 481 aa33.22■■■□□ 2.91
ATPAF1-202ENST00000371937 TOGARAM1Q9Y4F4 1720 aa33.21■■■□□ 2.91
ATPAF1-202ENST00000371937 PHAXQ9H814 394 aaKnown RBP33.21■■■□□ 2.91
ATPAF1-202ENST00000371937 HYPKQ9NX55 129 aa33.21■■■□□ 2.91
ATPAF1-202ENST00000371937 F6X3S4 739 aa33.2■■■□□ 2.91
ATPAF1-202ENST00000371937 MEX3CQ5U5Q3 659 aaKnown RBP33.2■■■□□ 2.91
ATPAF1-202ENST00000371937 SLC4A10Q6U841 1118 aa33.2■■■□□ 2.91
ATPAF1-202ENST00000371937 DDX21Q9NR30 783 aaKnown RBP eCLIP33.19■■■□□ 2.9
ATPAF1-202ENST00000371937 USP21Q9UK80 565 aa33.19■■■□□ 2.9
ATPAF1-202ENST00000371937 PAPPAQ13219 1627 aa33.19■■■□□ 2.9
ATPAF1-202ENST00000371937 C5P01031 1676 aa33.17■■■□□ 2.9
ATPAF1-202ENST00000371937 HDAC1Q13547 482 aaPredicted RBP33.17■■■□□ 2.9
ATPAF1-202ENST00000371937 PXDNLA1KZ92 1463 aa33.17■■■□□ 2.9
ATPAF1-202ENST00000371937 UBR2Q8IWV8 1755 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms