RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 ATP10DQ9P241 1426 aa31.76■■■□□ 2.68
YIF1A-201ENST00000359461 ATG3Q9NT62 314 aa31.76■■■□□ 2.67
YIF1A-201ENST00000359461 CICQ96RK0 1608 aaPredicted RBP31.75■■■□□ 2.67
YIF1A-201ENST00000359461 GNPATO15228 680 aa31.74■■■□□ 2.67
YIF1A-201ENST00000359461 TNNT2P45379 298 aaPredicted RBP31.74■■■□□ 2.67
YIF1A-201ENST00000359461 ATP6V1AP38606 617 aa31.73■■■□□ 2.67
YIF1A-201ENST00000359461 POLR3GLQ9BT43 218 aa31.73■■■□□ 2.67
YIF1A-201ENST00000359461 C4AP0C0L4 1744 aa31.72■■■□□ 2.67
YIF1A-201ENST00000359461 KDM6AO15550 1401 aaPredicted RBP31.72■■■□□ 2.67
YIF1A-201ENST00000359461 ERVV-2B6SEH9 535 aa31.7■■■□□ 2.67
YIF1A-201ENST00000359461 MYH14Q7Z406 1995 aaKnown RBP31.7■■■□□ 2.66
YIF1A-201ENST00000359461 EIF4G2P78344 907 aaKnown RBP eCLIP31.69■■■□□ 2.66
YIF1A-201ENST00000359461 HSPA5P11021 654 aaKnown RBP31.68■■■□□ 2.66
YIF1A-201ENST00000359461 SLC4A9Q96Q91 983 aa31.68■■■□□ 2.66
YIF1A-201ENST00000359461 PANK3Q9H999 370 aa31.68■■■□□ 2.66
YIF1A-201ENST00000359461 N4BP2Q86UW6 1770 aaPredicted RBP31.67■■■□□ 2.66
YIF1A-201ENST00000359461 DCAF5Q96JK2 942 aa31.67■■■□□ 2.66
YIF1A-201ENST00000359461 CEP350Q5VT06 3117 aa31.67■■■□□ 2.66
YIF1A-201ENST00000359461 HSP90AB1P08238 724 aaKnown RBP31.66■■■□□ 2.66
YIF1A-201ENST00000359461 SCN11AQ9UI33 1791 aa31.66■■■□□ 2.66
YIF1A-201ENST00000359461 BRCA1P38398 1863 aaKnown RBP31.65■■■□□ 2.66
YIF1A-201ENST00000359461 PCGF6Q9BYE7 350 aa31.65■■■□□ 2.66
YIF1A-201ENST00000359461 PXDNLA1KZ92 1463 aa31.65■■■□□ 2.66
YIF1A-201ENST00000359461 TJP1Q07157 1748 aa31.63■■■□□ 2.65
YIF1A-201ENST00000359461 PLEKHO1Q53GL0 409 aaPredicted RBP31.63■■■□□ 2.65
YIF1A-201ENST00000359461 CNTNAP4Q9C0A0 1308 aa31.63■■■□□ 2.65
YIF1A-201ENST00000359461 MMP10P09238 476 aa31.62■■■□□ 2.65
YIF1A-201ENST00000359461 AMOTQ4VCS5 1084 aa31.62■■■□□ 2.65
YIF1A-201ENST00000359461 RC3H1Q5TC82 1133 aaKnown RBP31.62■■■□□ 2.65
YIF1A-201ENST00000359461 C10orf71Q711Q0 1435 aa31.62■■■□□ 2.65
YIF1A-201ENST00000359461 RTCBQ9Y3I0 505 aaKnown RBP31.62■■■□□ 2.65
YIF1A-201ENST00000359461 ZNF530Q6P9A1 599 aaPredicted RBP31.61■■■□□ 2.65
YIF1A-201ENST00000359461 VIRMAQ69YN4 1812 aaKnown RBP31.61■■■□□ 2.65
YIF1A-201ENST00000359461 ADRA2BP18089 450 aa31.6■■■□□ 2.65
YIF1A-201ENST00000359461 GPBP1L1Q9HC44 474 aaPredicted RBP31.59■■■□□ 2.65
YIF1A-201ENST00000359461 TRAPPC3LQ5T215 181 aa31.58■■■□□ 2.65
YIF1A-201ENST00000359461 AEBP1Q8IUX7 1158 aa31.58■■■□□ 2.65
YIF1A-201ENST00000359461 RBM42Q9BTD8 480 aaKnown RBP31.58■■■□□ 2.65
YIF1A-201ENST00000359461 WWC3Q9ULE0 1092 aa31.58■■■□□ 2.65
YIF1A-201ENST00000359461 NLGN1Q8N2Q7 840 aa31.56■■■□□ 2.64
YIF1A-201ENST00000359461 ADAMTS7Q9UKP4 1686 aa31.56■■■□□ 2.64
YIF1A-201ENST00000359461 RPS6KA4O75676 772 aa31.55■■■□□ 2.64
YIF1A-201ENST00000359461 CABP4P57796 275 aa31.55■■■□□ 2.64
YIF1A-201ENST00000359461 MORC1Q86VD1 984 aa31.55■■■□□ 2.64
YIF1A-201ENST00000359461 ARHGEF1Q92888 912 aaKnown RBP31.55■■■□□ 2.64
YIF1A-201ENST00000359461 ARFGEF1Q9Y6D6 1849 aa31.54■■■□□ 2.64
YIF1A-201ENST00000359461 GYS1P13807 737 aa31.53■■■□□ 2.64
YIF1A-201ENST00000359461 MTHFSP49914 203 aa31.52■■■□□ 2.64
YIF1A-201ENST00000359461 TGFB2P61812 414 aa31.52■■■□□ 2.64
YIF1A-201ENST00000359461 C1orf141Q5JVX7 400 aa31.51■■■□□ 2.63
YIF1A-201ENST00000359461 IL13P35225 146 aa31.5■■■□□ 2.63
YIF1A-201ENST00000359461 MRC1P22897 1456 aa31.5■■■□□ 2.63
YIF1A-201ENST00000359461 SULT6B1Q6IMI4 303 aa31.49■■■□□ 2.63
YIF1A-201ENST00000359461 ZNF526Q8TF50 670 aaPredicted RBP31.49■■■□□ 2.63
YIF1A-201ENST00000359461 RFC4P35249 363 aa31.48■■■□□ 2.63
YIF1A-201ENST00000359461 KNSTRNQ9Y448 316 aa31.48■■■□□ 2.63
YIF1A-201ENST00000359461 NFATC2IPQ8NCF5 419 aa31.47■■■□□ 2.63
YIF1A-201ENST00000359461 PTCD1O75127 700 aaKnown RBP31.46■■■□□ 2.63
YIF1A-201ENST00000359461 CRKLP46109 303 aaKnown RBP31.46■■■□□ 2.63
YIF1A-201ENST00000359461 AMER1Q5JTC6 1135 aaPredicted RBP31.46■■■□□ 2.63
YIF1A-201ENST00000359461 CCDC87Q9NVE4 849 aa31.46■■■□□ 2.63
YIF1A-201ENST00000359461 A0A0G2JLW4 131 aa31.44■■■□□ 2.62
YIF1A-201ENST00000359461 PARP3Q9Y6F1 533 aa31.43■■■□□ 2.62
YIF1A-201ENST00000359461 USP42Q9H9J4 1324 aaKnown RBP31.43■■■□□ 2.62
YIF1A-201ENST00000359461 UBR2Q8IWV8 1755 aa31.41■■■□□ 2.62
YIF1A-201ENST00000359461 KIF3CO14782 793 aa31.41■■■□□ 2.62
YIF1A-201ENST00000359461 DPEP1P16444 411 aa31.41■■■□□ 2.62
YIF1A-201ENST00000359461 HSPA6P17066 643 aa31.41■■■□□ 2.62
YIF1A-201ENST00000359461 BCS1LQ9Y276 419 aa31.41■■■□□ 2.62
YIF1A-201ENST00000359461 AKAP4Q5JQC9 854 aa31.4■■■□□ 2.62
YIF1A-201ENST00000359461 KCPQ6ZWJ8 1503 aa31.39■■■□□ 2.62
YIF1A-201ENST00000359461 KCNA3P22001 575 aa31.38■■■□□ 2.61
YIF1A-201ENST00000359461 SRP68Q9UHB9 627 aaKnown RBP31.38■■■□□ 2.61
YIF1A-201ENST00000359461 INTS5Q6P9B9 1019 aaKnown RBP31.37■■■□□ 2.61
YIF1A-201ENST00000359461 CCER1Q8TC90 406 aaPredicted RBP31.37■■■□□ 2.61
YIF1A-201ENST00000359461 SLC52A2Q9HAB3 445 aa31.37■■■□□ 2.61
YIF1A-201ENST00000359461 KIF7Q2M1P5 1343 aa31.37■■■□□ 2.61
YIF1A-201ENST00000359461 NRXN2Q9P2S2 1712 aa31.37■■■□□ 2.61
YIF1A-201ENST00000359461 AFDNP55196 1824 aaKnown RBP31.37■■■□□ 2.61
YIF1A-201ENST00000359461 DDR1Q08345 913 aa31.36■■■□□ 2.61
YIF1A-201ENST00000359461 FKBP8Q14318 412 aa31.36■■■□□ 2.61
YIF1A-201ENST00000359461 DLEC1Q9Y238 1755 aa31.33■■■□□ 2.61
YIF1A-201ENST00000359461 FCHSD2O94868 740 aa31.33■■■□□ 2.61
YIF1A-201ENST00000359461 SBF1O95248 1867 aa31.33■■■□□ 2.61
YIF1A-201ENST00000359461 SOS1Q07889 1333 aaPredicted RBP31.32■■■□□ 2.6
YIF1A-201ENST00000359461 ARHGAP27Q6ZUM4 889 aa31.32■■■□□ 2.6
YIF1A-201ENST00000359461 LGR6Q9HBX8 967 aa31.32■■■□□ 2.6
YIF1A-201ENST00000359461 DNAJC10Q8IXB1 793 aa31.31■■■□□ 2.6
YIF1A-201ENST00000359461 COL3A1P02461 1466 aaPredicted RBP31.3■■■□□ 2.6
YIF1A-201ENST00000359461 PER1O15534 1290 aaPredicted RBP31.3■■■□□ 2.6
YIF1A-201ENST00000359461 RNMTO43148 476 aaKnown RBP31.3■■■□□ 2.6
YIF1A-201ENST00000359461 SIPA1L3O60292 1781 aaPredicted RBP31.3■■■□□ 2.6
YIF1A-201ENST00000359461 POLRMTO00411 1230 aaKnown RBP31.29■■■□□ 2.6
YIF1A-201ENST00000359461 PIM2Q9P1W9 311 aa31.29■■■□□ 2.6
YIF1A-201ENST00000359461 HMOX1P09601 288 aa31.28■■■□□ 2.6
YIF1A-201ENST00000359461 CYP19A1P11511 503 aaPredicted RBP31.28■■■□□ 2.6
YIF1A-201ENST00000359461 TM4SF1P30408 202 aa31.28■■■□□ 2.6
YIF1A-201ENST00000359461 COL15A1P39059 1388 aa31.26■■■□□ 2.59
YIF1A-201ENST00000359461 SLC39A6Q13433 755 aa31.25■■■□□ 2.59
YIF1A-201ENST00000359461 MTHFSDQ2M296 383 aaKnown RBP31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms