RNA–Protein interactions for RNA: ENST00000356247.4

AC004057.1-202, humanhuman

TSL 3 BASIC

Gene AC004057.1, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004057.1-202ENST00000356247 TPD52L2O43399 206 aaKnown RBP5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 ZSCAN20P17040 1043 aaPredicted RBP5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 UVSSAQ2YD98 709 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 CDCA8Q53HL2 280 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 FOXD4L5Q5VV16 416 aaPredicted RBP5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 LARP1Q6PKG0 1096 aaKnown RBP5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 RPAINQ86UA6 219 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 CCDC24Q8N4L8 307 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 FOXD4L4Q8WXT5 416 aaPredicted RBP5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 UCN2Q96RP3 112 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 NCAPGQ9BPX3 1015 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 ARHGAP9Q9BRR9 750 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 CCDC94Q9BW85 323 aaPredicted RBP5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 SUDS3Q9H7L9 328 aaPredicted RBP5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 PCDHB9Q9Y5E1 797 aa5.57□□□□□ -1.52
AC004057.1-202ENST00000356247 IGF1RP08069 1367 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 EXOC5O00471 708 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 CTAGE5O15320 804 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 DXOO77932 396 aaKnown RBP5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 ZNF853P0CG23 659 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 COPS2P61201 443 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 TRDNQ13061 729 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 ELOAQ14241 798 aaKnown RBP5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 LONRF3Q496Y0 759 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 KRBA2Q6ZNG9 492 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 ARMCX6Q7L4S7 300 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 DZIP3Q86Y13 1208 aaKnown RBP5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 RNF135Q8IUD6 432 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 TRIM52Q96A61 297 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 RRAGDQ9NQL2 400 aaPredicted RBP5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 SMC4Q9NTJ3 1288 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 WBP1LQ9NX94 342 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 ZHX1Q9UKY1 873 aaPredicted RBP5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 FRMD4BQ9Y2L6 1034 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 KIF3AQ9Y496 699 aa5.56□□□□□ -1.52
AC004057.1-202ENST00000356247 NINLQ9Y2I6 1382 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 RAD50Q92878 1312 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 USP17L3A6NCW0 530 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 USP17L4A6NCW7 530 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 ATP5J2-PTCD1G3V325 749 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 CCER2I3L3R5 266 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 DYNC1I1O14576 645 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 ADH1BP00325 375 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 MMP16P51512 607 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 SRPK2P78362 688 aaKnown RBP5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 AGERQ15109 404 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 EML3Q32P44 896 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 MAP7D1Q3KQU3 841 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 GJC2Q5T442 439 aaPredicted RBP5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 RNF20Q5VTR2 975 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 USP17L2Q6R6M4 530 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 DDX46Q7L014 1031 aaKnown RBP5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 USP17L1Q7RTZ2 530 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 TRIM50Q86XT4 487 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 PLEKHM2Q8IWE5 1019 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 ZNF428Q96B54 188 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 SYNPO2Q9UMS6 1093 aa5.55□□□□□ -1.52
AC004057.1-202ENST00000356247 KIF16BQ96L93 1317 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 USP17L5A8MUK1 530 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 IPO7O95373 1038 aaKnown RBP5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 SETSIPP0DME0 302 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 ATP1A2P50993 1020 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 THSD4Q6ZMP0 1018 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 SIRT1Q96EB6 747 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 CCDC85AQ96PX6 553 aaPredicted RBP5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 MED4Q9NPJ6 270 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 DONSONQ9NYP3 566 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 EEA1Q15075 1411 aa5.54□□□□□ -1.52
AC004057.1-202ENST00000356247 SYNRGQ9UMZ2 1314 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 PPP1R12AO14974 1030 aaPredicted RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 COQ9O75208 318 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 ZPR1O75312 459 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 RASA1P20936 1047 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 POLD1P28340 1107 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 CD151P48509 253 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 FOXD4L6Q3SYB3 417 aaPredicted RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 ZNF280DQ6N043 979 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 FOXD4L3Q6VB84 417 aaPredicted RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 BPHLQ86WA6 291 aaPredicted RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 ZNF513Q8N8E2 541 aaPredicted RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 RNF217Q8TC41 542 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 FAM200AQ8TCP9 573 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 FRAT1Q92837 279 aaPredicted RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 KCTD12Q96CX2 325 aaKnown RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 TIGD1Q96MW7 591 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 SLC6A16Q9GZN6 736 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 UNC93B1Q9H1C4 597 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 IL21Q9HBE4 155 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 CALCOCO1Q9P1Z2 691 aa5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 MKRN1Q9UHC7 482 aaKnown RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 NOVA2Q9UNW9 492 aaKnown RBP5.53□□□□□ -1.52
AC004057.1-202ENST00000356247 POTEB3A0JP26 581 aa5.52□□□□□ -1.53
AC004057.1-202ENST00000356247 KLHL33A6NCF5 533 aa5.52□□□□□ -1.53
AC004057.1-202ENST00000356247 GOLGA6CA6NDK9 693 aa5.52□□□□□ -1.53
AC004057.1-202ENST00000356247 GOLGA6BA6NDN3 693 aa5.52□□□□□ -1.53
AC004057.1-202ENST00000356247 FAM196BA6NMK8 535 aa5.52□□□□□ -1.53
AC004057.1-202ENST00000356247 TULP2O00295 520 aa5.52□□□□□ -1.53
AC004057.1-202ENST00000356247 GOLGA6DP0CG33 693 aa5.52□□□□□ -1.53
AC004057.1-202ENST00000356247 SCP2P22307 547 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms