RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SPATA31A5Q5VU36 1347 aa5.43□□□□□ -1.54
CNOT4-202ENST00000356162 SPATA31A7Q8IWB4 1347 aa5.43□□□□□ -1.54
CNOT4-202ENST00000356162 FLT4P35916 1363 aa5.43□□□□□ -1.54
CNOT4-202ENST00000356162 ERBB3P21860 1342 aa5.43□□□□□ -1.54
CNOT4-202ENST00000356162 MAP3K19Q56UN5 1328 aa5.43□□□□□ -1.54
CNOT4-202ENST00000356162 WDR17Q8IZU2 1322 aa5.43□□□□□ -1.54
CNOT4-202ENST00000356162 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
CNOT4-202ENST00000356162 GJD4Q96KN9 370 aaPredicted RBP5.43□□□□□ -1.54
CNOT4-202ENST00000356162 DISP2A7MBM2 1401 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 SPATA31A1Q5TZJ5 1347 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 ILDR2Q71H61 639 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 IP6K1Q92551 441 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 KHSRPQ92945 711 aaKnown RBP eCLIP5.42□□□□□ -1.543e-7■■■■□ 21.1
CNOT4-202ENST00000356162 RGPD2P0DJD1 1756 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 INSRP06213 1382 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 DSG2Q14126 1118 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 CRISPLD2Q9H0B8 497 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 STRN4Q9NRL3 753 aa5.42□□□□□ -1.54
CNOT4-202ENST00000356162 THRAP3Q9Y2W1 955 aaKnown RBP5.42□□□□□ -1.54
CNOT4-202ENST00000356162 NCAPD2Q15021 1401 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 PER1O15534 1290 aaPredicted RBP5.41□□□□□ -1.54
CNOT4-202ENST00000356162 HOXC9P31274 260 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 AMPHP49418 695 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 EVA1CP58658 441 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 LARP1Q6PKG0 1096 aaKnown RBP5.41□□□□□ -1.54
CNOT4-202ENST00000356162 BARGINQ6ZT62 677 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 PLPP6Q8IY26 295 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 BBXQ8WY36 941 aaPredicted RBP5.41□□□□□ -1.54
CNOT4-202ENST00000356162 CCDC9Q9Y3X0 531 aaKnown RBP5.41□□□□□ -1.54
CNOT4-202ENST00000356162 PCDHGA4Q9Y5G9 962 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 TNS2Q63HR2 1409 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 RGPD1P0DJD0 1748 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 VARS2Q5ST30 1063 aaKnown RBP5.41□□□□□ -1.54
CNOT4-202ENST00000356162 MORC1Q86VD1 984 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 TCP11L2Q8N4U5 519 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 ANKRD24Q8TF21 1146 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 CARD10Q9BWT7 1032 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 PKD1L3Q7Z443 1732 aa5.41□□□□□ -1.54
CNOT4-202ENST00000356162 ONECUT3O60422 494 aaPredicted RBP5.4□□□□□ -1.54
CNOT4-202ENST00000356162 RRS1Q15050 365 aaKnown RBP5.4□□□□□ -1.54
CNOT4-202ENST00000356162 AXIN2Q9Y2T1 843 aa5.4□□□□□ -1.54
CNOT4-202ENST00000356162 SHANK3Q9BYB0 1731 aa5.4□□□□□ -1.54
CNOT4-202ENST00000356162 PLEKHG2Q9H7P9 1386 aa5.4□□□□□ -1.55
CNOT4-202ENST00000356162 COL3A1P02461 1466 aaPredicted RBP5.4□□□□□ -1.55
CNOT4-202ENST00000356162 CSB-PGBD3P0DP91 1061 aa5.4□□□□□ -1.55
CNOT4-202ENST00000356162 TOM1L2Q6ZVM7 507 aa5.4□□□□□ -1.55
CNOT4-202ENST00000356162 CDCA7Q9BWT1 371 aaPredicted RBP5.4□□□□□ -1.55
CNOT4-202ENST00000356162 EMILIN1Q9Y6C2 1016 aa5.4□□□□□ -1.55
CNOT4-202ENST00000356162 SEPT12Q8IYM1 358 aa5.39□□□□□ -1.55
CNOT4-202ENST00000356162 PTCD2Q8WV60 388 aaKnown RBP5.39□□□□□ -1.55
CNOT4-202ENST00000356162 TNS1Q9HBL0 1735 aaKnown RBP5.39□□□□□ -1.55
CNOT4-202ENST00000356162 ZNF316A6NFI3 1004 aaPredicted RBP5.39□□□□□ -1.55
CNOT4-202ENST00000356162 NUDT7P0C024 238 aa5.39□□□□□ -1.55
CNOT4-202ENST00000356162 FAM98CQ17RN3 349 aaKnown RBP5.39□□□□□ -1.55
CNOT4-202ENST00000356162 POLKQ9UBT6 870 aa5.39□□□□□ -1.55
CNOT4-202ENST00000356162 PARD3Q8TEW0 1356 aa5.39□□□□□ -1.55
CNOT4-202ENST00000356162 OVOS2A0A0G2JMS6 1433 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 FBLN1P23142 703 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 CC2D1BQ5T0F9 858 aaKnown RBP5.38□□□□□ -1.55
CNOT4-202ENST00000356162 MEGF6O75095 1541 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 NHSQ6T4R5 1651 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 RGPD3A6NKT7 1758 aaPredicted RBP5.38□□□□□ -1.55
CNOT4-202ENST00000356162 RGPD4Q7Z3J3 1758 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 SOCS7O14512 581 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 PDE4AP27815 886 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 NLRP2Q9NX02 1062 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 SBF2Q86WG5 1849 aa5.38□□□□□ -1.55
CNOT4-202ENST00000356162 BCL9O00512 1426 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 A0A0G2JS52 829 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 TNNT2P45379 298 aaPredicted RBP5.37□□□□□ -1.55
CNOT4-202ENST00000356162 MYT1Q01538 1121 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 HSP90AB2PQ58FF8 381 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 PPP1R15BQ5SWA1 713 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 KRT27Q7Z3Y8 459 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 ZNF687Q8N1G0 1237 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 LTV1Q96GA3 475 aaPredicted RBP5.37□□□□□ -1.55
CNOT4-202ENST00000356162 IL2RBP14784 551 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 SPNS2Q8IVW8 549 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 USP35Q9P2H5 1018 aa5.37□□□□□ -1.55
CNOT4-202ENST00000356162 IGSF1Q8N6C5 1336 aa5.36□□□□□ -1.55
CNOT4-202ENST00000356162 PPM1GO15355 546 aaPredicted RBP5.36□□□□□ -1.55
CNOT4-202ENST00000356162 EIF4A2Q14240 407 aaKnown RBP5.36□□□□□ -1.55
CNOT4-202ENST00000356162 DOT1LQ8TEK3 1739 aa5.36□□□□□ -1.55
CNOT4-202ENST00000356162 DDX10Q13206 875 aaKnown RBP5.36□□□□□ -1.55
CNOT4-202ENST00000356162 DDB1Q16531 1140 aa5.36□□□□□ -1.55
CNOT4-202ENST00000356162 LHX6Q9UPM6 363 aa5.36□□□□□ -1.55
CNOT4-202ENST00000356162 KDRP35968 1356 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 MTHFSP49914 203 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 MFSD10Q14728 455 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 RALBP1Q15311 655 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 NBPF6Q5VWK0 638 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 OXER1Q8TDS5 423 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 NBPF4Q96M43 638 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 LARP6Q9BRS8 491 aaKnown RBP5.35□□□□□ -1.55
CNOT4-202ENST00000356162 RREB1Q92766 1687 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 TATP17735 454 aaPredicted RBP5.35□□□□□ -1.55
CNOT4-202ENST00000356162 PPP2R1AP30153 589 aa5.35□□□□□ -1.55
CNOT4-202ENST00000356162 PDE3BQ13370 1112 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms