RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 CPDO75976 1380 aa22.9■■□□□ 1.26
SHISA3-201ENST00000319234 CRYBG1Q9Y4K1 1723 aa22.89■■□□□ 1.26
SHISA3-201ENST00000319234 TBC1D32Q96NH3 1257 aa22.89■■□□□ 1.26
SHISA3-201ENST00000319234 SOS2Q07890 1332 aaPredicted RBP22.89■■□□□ 1.26
SHISA3-201ENST00000319234 RNMTO43148 476 aaKnown RBP22.89■■□□□ 1.25
SHISA3-201ENST00000319234 GSE1Q14687 1217 aa22.89■■□□□ 1.25
SHISA3-201ENST00000319234 OVOS2A0A0G2JMS6 1433 aa22.89■■□□□ 1.25
SHISA3-201ENST00000319234 TEFQ10587 303 aa22.88■■□□□ 1.25
SHISA3-201ENST00000319234 MPRIPQ6WCQ1 1025 aa22.88■■□□□ 1.25
SHISA3-201ENST00000319234 NLRP2Q9NX02 1062 aa22.88■■□□□ 1.25
SHISA3-201ENST00000319234 G2E3Q7L622 706 aa22.87■■□□□ 1.25
SHISA3-201ENST00000319234 C1orf115Q9H7X2 142 aa22.87■■□□□ 1.25
SHISA3-201ENST00000319234 RAPGEF4Q8WZA2 1011 aa22.86■■□□□ 1.25
SHISA3-201ENST00000319234 EIF4A1P60842 406 aaKnown RBP22.85■■□□□ 1.25
SHISA3-201ENST00000319234 CHRNA2Q15822 529 aa22.85■■□□□ 1.25
SHISA3-201ENST00000319234 CSB-PGBD3P0DP91 1061 aa22.85■■□□□ 1.25
SHISA3-201ENST00000319234 BTBD11A6QL63 1104 aa22.83■■□□□ 1.25
SHISA3-201ENST00000319234 HOXB7P09629 217 aa22.83■■□□□ 1.25
SHISA3-201ENST00000319234 TATP17735 454 aaPredicted RBP22.83■■□□□ 1.25
SHISA3-201ENST00000319234 GCC1Q96CN9 775 aa22.83■■□□□ 1.25
SHISA3-201ENST00000319234 KDM3BQ7LBC6 1761 aa22.83■■□□□ 1.25
SHISA3-201ENST00000319234 CCT4P50991 539 aaKnown RBP22.83■■□□□ 1.24
SHISA3-201ENST00000319234 NUCB1Q02818 461 aa22.83■■□□□ 1.24
SHISA3-201ENST00000319234 CHMP4AQ9BY43 222 aa22.83■■□□□ 1.24
SHISA3-201ENST00000319234 FAM208AQ9UK61 1670 aaKnown RBP22.83■■□□□ 1.24
SHISA3-201ENST00000319234 PLEKHG2Q9H7P9 1386 aa22.83■■□□□ 1.24
SHISA3-201ENST00000319234 FLIIQ13045 1269 aa22.82■■□□□ 1.24
SHISA3-201ENST00000319234 SIRT2Q8IXJ6 389 aa22.82■■□□□ 1.24
SHISA3-201ENST00000319234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.82■■□□□ 1.24
SHISA3-201ENST00000319234 HDGFL1Q5TGJ6 251 aa22.81■■□□□ 1.24
SHISA3-201ENST00000319234 NECTIN2Q92692 538 aa22.81■■□□□ 1.24
SHISA3-201ENST00000319234 SPG7Q9UQ90 795 aa22.8■■□□□ 1.24
SHISA3-201ENST00000319234 KCNQ3O43525 872 aa22.8■■□□□ 1.24
SHISA3-201ENST00000319234 F6X3S4 739 aa22.79■■□□□ 1.24
SHISA3-201ENST00000319234 FRAT2O75474 233 aaPredicted RBP22.79■■□□□ 1.24
SHISA3-201ENST00000319234 ADAMTS7Q9UKP4 1686 aa22.79■■□□□ 1.24
SHISA3-201ENST00000319234 CACNA1FO60840 1977 aa22.78■■□□□ 1.24
SHISA3-201ENST00000319234 CHD1LQ86WJ1 897 aa22.78■■□□□ 1.24
SHISA3-201ENST00000319234 MEGF6O75095 1541 aa22.78■■□□□ 1.24
SHISA3-201ENST00000319234 FKBP5Q13451 457 aaPredicted RBP22.78■■□□□ 1.24
SHISA3-201ENST00000319234 SLC4A10Q6U841 1118 aa22.78■■□□□ 1.24
SHISA3-201ENST00000319234 RPAP2Q8IXW5 612 aaPredicted RBP22.78■■□□□ 1.24
SHISA3-201ENST00000319234 ANKRD44Q8N8A2 993 aa22.77■■□□□ 1.24
SHISA3-201ENST00000319234 PRDM11Q9NQV5 511 aa22.77■■□□□ 1.24
SHISA3-201ENST00000319234 MEIS3Q99687 375 aa22.76■■□□□ 1.23
SHISA3-201ENST00000319234 PHKG2P15735 406 aa22.76■■□□□ 1.23
SHISA3-201ENST00000319234 EIF2S2P20042 333 aaKnown RBP22.75■■□□□ 1.23
SHISA3-201ENST00000319234 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
SHISA3-201ENST00000319234 ATP10DQ9P241 1426 aa22.75■■□□□ 1.23
SHISA3-201ENST00000319234 ANKRD45Q5TZF3 282 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 LNPKQ9C0E8 428 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 ANTXR1Q9H6X2 564 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 NHSL1Q5SYE7 1610 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 CEP85Q6P2H3 762 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 TBC1D2Q9BYX2 928 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 DCTPP1Q9H773 170 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 HEG1Q9ULI3 1381 aa22.74■■□□□ 1.23
SHISA3-201ENST00000319234 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
SHISA3-201ENST00000319234 C22orf23Q9BZE7 217 aa22.72■■□□□ 1.23
SHISA3-201ENST00000319234 WDR17Q8IZU2 1322 aa22.72■■□□□ 1.23
SHISA3-201ENST00000319234 PXDNLA1KZ92 1463 aa22.72■■□□□ 1.23
SHISA3-201ENST00000319234 KDM6AO15550 1401 aaPredicted RBP22.72■■□□□ 1.23
SHISA3-201ENST00000319234 PHAXQ9H814 394 aaKnown RBP22.72■■□□□ 1.23
SHISA3-201ENST00000319234 SLC52A2Q9HAB3 445 aa22.71■■□□□ 1.23
SHISA3-201ENST00000319234 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.23
SHISA3-201ENST00000319234 CHPF2Q9P2E5 772 aa22.7■■□□□ 1.23
SHISA3-201ENST00000319234 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
SHISA3-201ENST00000319234 SCN11AQ9UI33 1791 aa22.69■■□□□ 1.22
SHISA3-201ENST00000319234 PKD1L3Q7Z443 1732 aa22.69■■□□□ 1.22
SHISA3-201ENST00000319234 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
SHISA3-201ENST00000319234 CYP27B1O15528 508 aa22.69■■□□□ 1.22
SHISA3-201ENST00000319234 GNAI3P08754 354 aa22.69■■□□□ 1.22
SHISA3-201ENST00000319234 TOM1L2Q6ZVM7 507 aa22.69■■□□□ 1.22
SHISA3-201ENST00000319234 DCAF5Q96JK2 942 aa22.69■■□□□ 1.22
SHISA3-201ENST00000319234 GNAI2P04899 355 aa22.68■■□□□ 1.22
SHISA3-201ENST00000319234 DBF4Q9UBU7 674 aaPredicted RBP22.68■■□□□ 1.22
SHISA3-201ENST00000319234 COL5A2P05997 1499 aaPredicted RBP22.68■■□□□ 1.22
SHISA3-201ENST00000319234 SLKQ9H2G2 1235 aaPredicted RBP22.67■■□□□ 1.22
SHISA3-201ENST00000319234 HMMRO75330 724 aa22.67■■□□□ 1.22
SHISA3-201ENST00000319234 MFAP1P55081 439 aaKnown RBP22.67■■□□□ 1.22
SHISA3-201ENST00000319234 ZNF790Q6PG37 636 aa22.66■■□□□ 1.22
SHISA3-201ENST00000319234 NFATC2IPQ8NCF5 419 aa22.66■■□□□ 1.22
SHISA3-201ENST00000319234 N4BP2Q86UW6 1770 aaPredicted RBP22.66■■□□□ 1.22
SHISA3-201ENST00000319234 CARD10Q9BWT7 1032 aa22.65■■□□□ 1.22
SHISA3-201ENST00000319234 BMP2KLQ5H9B9 411 aa22.65■■□□□ 1.22
SHISA3-201ENST00000319234 MRC1P22897 1456 aa22.65■■□□□ 1.22
SHISA3-201ENST00000319234 RBM25P49756 843 aaKnown RBP22.63■■□□□ 1.21
SHISA3-201ENST00000319234 SRCIN1Q9C0H9 1055 aa22.63■■□□□ 1.21
SHISA3-201ENST00000319234 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
SHISA3-201ENST00000319234 ZCRB1Q8TBF4 217 aaKnown RBP22.62■■□□□ 1.21
SHISA3-201ENST00000319234 DNAAF4Q8WXU2 420 aa22.62■■□□□ 1.21
SHISA3-201ENST00000319234 USP44Q9H0E7 712 aa22.62■■□□□ 1.21
SHISA3-201ENST00000319234 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
SHISA3-201ENST00000319234 PRAMEF22A3QJZ6 481 aa22.61■■□□□ 1.21
SHISA3-201ENST00000319234 ANXA1P04083 346 aa22.61■■□□□ 1.21
SHISA3-201ENST00000319234 EVA1CP58658 441 aa22.61■■□□□ 1.21
SHISA3-201ENST00000319234 PI4KAP2A4QPH2 592 aa22.61■■□□□ 1.21
SHISA3-201ENST00000319234 PI4KAP1Q8N8J0 262 aa22.61■■□□□ 1.21
SHISA3-201ENST00000319234 HYPKQ9NX55 129 aa22.61■■□□□ 1.21
SHISA3-201ENST00000319234 PCDH11XQ9BZA7 1347 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms