RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 KIAA1522Q9P206 1035 aaPredicted RBP6.67□□□□□ -1.34
SMCO3-201ENST00000316048 HCSTQ9UBK5 93 aa6.67□□□□□ -1.34
SMCO3-201ENST00000316048 USP3Q9Y6I4 520 aa6.67□□□□□ -1.34
SMCO3-201ENST00000316048 INHAP05111 366 aa6.67□□□□□ -1.34
SMCO3-201ENST00000316048 GGCXP38435 758 aa6.67□□□□□ -1.34
SMCO3-201ENST00000316048 RPIAP49247 311 aa6.67□□□□□ -1.34
SMCO3-201ENST00000316048 A0A1W2PRU2 124 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 ADH1CP00326 375 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 ZNF16P17020 682 aaPredicted RBP6.66□□□□□ -1.34
SMCO3-201ENST00000316048 MAPK1P28482 360 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 CCDC125Q86Z20 511 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 CCDC116Q8IYX3 515 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 MRGPRX2Q96LB1 330 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 BCL2L13Q9BXK5 485 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 ESF1Q9H501 851 aaKnown RBP6.66□□□□□ -1.34
SMCO3-201ENST00000316048 ARHGEF10LQ9HCE6 1279 aa6.66□□□□□ -1.34
SMCO3-201ENST00000316048 IGFBP4P22692 258 aa6.65□□□□□ -1.34
SMCO3-201ENST00000316048 ATAD2Q6PL18 1390 aa6.65□□□□□ -1.35
SMCO3-201ENST00000316048 WASLO00401 505 aaPredicted RBP6.65□□□□□ -1.35
SMCO3-201ENST00000316048 FKBP4Q02790 459 aaKnown RBP eCLIP6.65□□□□□ -1.35
SMCO3-201ENST00000316048 CD2BP2O95400 341 aaKnown RBP6.64□□□□□ -1.35
SMCO3-201ENST00000316048 MPSTP25325 297 aa6.64□□□□□ -1.35
SMCO3-201ENST00000316048 HELQQ8TDG4 1101 aa6.64□□□□□ -1.35
SMCO3-201ENST00000316048 MRRFQ96E11 262 aaKnown RBP6.64□□□□□ -1.35
SMCO3-201ENST00000316048 FOXO3O43524 673 aa6.63□□□□□ -1.35
SMCO3-201ENST00000316048 PTCD1O75127 700 aaKnown RBP6.63□□□□□ -1.35
SMCO3-201ENST00000316048 IL2RAP01589 272 aa6.63□□□□□ -1.35
SMCO3-201ENST00000316048 MYT1Q01538 1121 aa6.63□□□□□ -1.35
SMCO3-201ENST00000316048 DHX9Q08211 1270 aaKnown RBP6.63□□□□□ -1.35
SMCO3-201ENST00000316048 SH3PXD2AQ5TCZ1 1133 aa6.63□□□□□ -1.35
SMCO3-201ENST00000316048 SLC9A9Q8IVB4 645 aa6.63□□□□□ -1.35
SMCO3-201ENST00000316048 BACH1O14867 736 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 FOXK2Q01167 660 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 CBLBQ13191 982 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 CYP2U1Q7Z449 544 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 KDF1Q8NAX2 398 aaPredicted RBP6.62□□□□□ -1.35
SMCO3-201ENST00000316048 SCHIP1Q9P0W5 487 aaPredicted RBP6.62□□□□□ -1.35
SMCO3-201ENST00000316048 PPP1R12BO60237 982 aaPredicted RBP6.62□□□□□ -1.35
SMCO3-201ENST00000316048 IGSF3O75054 1194 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 ERCC3P19447 782 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 SF3B2Q13435 895 aaKnown RBP6.62□□□□□ -1.35
SMCO3-201ENST00000316048 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 SLC4A9Q96Q91 983 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 DCTN4Q9UJW0 460 aa6.62□□□□□ -1.35
SMCO3-201ENST00000316048 A6NJY4 79 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 WNT7AO00755 349 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 NR5A1Q13285 461 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 SPNS2Q8IVW8 549 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 COL26A1Q96A83 441 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 ALDH1A1P00352 501 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 GNRH1P01148 92 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 FBXO33Q7Z6M2 555 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 MPNDQ8N594 471 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 ASB16Q96NS5 453 aa6.61□□□□□ -1.35
SMCO3-201ENST00000316048 C2orf49Q9BVC5 232 aaPredicted RBP6.61□□□□□ -1.35
SMCO3-201ENST00000316048 TNFRSF10BO14763 440 aa6.6□□□□□ -1.35
SMCO3-201ENST00000316048 SLC19A1P41440 591 aa6.6□□□□□ -1.35
SMCO3-201ENST00000316048 SMTNP53814 917 aa6.6□□□□□ -1.35
SMCO3-201ENST00000316048 MTFR1Q15390 333 aa6.6□□□□□ -1.35
SMCO3-201ENST00000316048 COX20Q5RI15 118 aa6.6□□□□□ -1.35
SMCO3-201ENST00000316048 QTRT2Q9H974 415 aaKnown RBP6.6□□□□□ -1.35
SMCO3-201ENST00000316048 IGSF5Q9NSI5 407 aa6.6□□□□□ -1.35
SMCO3-201ENST00000316048 LRFN2Q9ULH4 789 aa6.6□□□□□ -1.35
SMCO3-201ENST00000316048 IQSEC3Q9UPP2 1182 aaPredicted RBP6.6□□□□□ -1.35
SMCO3-201ENST00000316048 NNTQ13423 1086 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 TLR1Q15399 786 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 C16orf46Q6P387 395 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 CNKSR1Q969H4 720 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 VTI1AQ96AJ9 217 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 ITPKCQ96DU7 683 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 CCDC87Q9NVE4 849 aa6.59□□□□□ -1.35
SMCO3-201ENST00000316048 ZBTB39O15060 712 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 NPR3P17342 541 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 FOXC1Q12948 553 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 TMC7Q7Z402 723 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 ATCAYQ86WG3 371 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 ZDHHC1Q8WTX9 485 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 NGLY1Q96IV0 654 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 ZFAND3Q9H8U3 227 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 HRH3Q9Y5N1 445 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 ADH1AP07327 375 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 ESCO1Q5FWF5 840 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 SPRYD7Q5W111 196 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 XAGE2Q96GT9 111 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
SMCO3-201ENST00000316048 P4HBP07237 508 aaKnown RBP6.57□□□□□ -1.36
SMCO3-201ENST00000316048 EIF1AXP47813 144 aaKnown RBP6.57□□□□□ -1.36
SMCO3-201ENST00000316048 PSMA6P60900 246 aaKnown RBP6.57□□□□□ -1.36
SMCO3-201ENST00000316048 RGL4Q8IZJ4 473 aa6.57□□□□□ -1.36
SMCO3-201ENST00000316048 PKD2L1Q9P0L9 805 aa6.57□□□□□ -1.36
SMCO3-201ENST00000316048 FZD6O60353 706 aa6.56□□□□□ -1.36
SMCO3-201ENST00000316048 FAM13AO94988 1023 aa6.56□□□□□ -1.36
SMCO3-201ENST00000316048 ZNF697Q5TEC3 545 aa6.56□□□□□ -1.36
SMCO3-201ENST00000316048 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
SMCO3-201ENST00000316048 ESYT1Q9BSJ8 1104 aa6.56□□□□□ -1.36
SMCO3-201ENST00000316048 EML1O00423 815 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms