RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 AKAP4Q5JQC9 854 aa8.86□□□□□ -0.99
LYSMD3-201ENST00000315948 C16orf71Q8IYS4 520 aaPredicted RBP8.86□□□□□ -0.99
LYSMD3-201ENST00000315948 OTUD7AQ8TE49 926 aaPredicted RBP8.86□□□□□ -0.99
LYSMD3-201ENST00000315948 ADAMTS2O95450 1211 aa8.86□□□□□ -0.99
LYSMD3-201ENST00000315948 SMARCA5O60264 1052 aaPredicted RBP8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 RWDD1Q9H446 243 aaPredicted RBP8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 KIF1AQ12756 1690 aa8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 KDM6AO15550 1401 aaPredicted RBP8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 BRPF1P55201 1214 aaPredicted RBP8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 PHKG2P15735 406 aa8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 AIMP1Q12904 312 aaKnown RBP8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 BTG4Q9NY30 223 aa8.85□□□□□ -0.99
LYSMD3-201ENST00000315948 PHRF1Q9P1Y6 1649 aaKnown RBP8.84□□□□□ -0.99
LYSMD3-201ENST00000315948 JARID2Q92833 1246 aaPredicted RBP8.84□□□□□ -0.99
LYSMD3-201ENST00000315948 ANKRD45Q5TZF3 282 aa8.84□□□□□ -0.99
LYSMD3-201ENST00000315948 TSHZ3Q63HK5 1081 aa8.84□□□□□ -0.99
LYSMD3-201ENST00000315948 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
LYSMD3-201ENST00000315948 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
LYSMD3-201ENST00000315948 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
LYSMD3-201ENST00000315948 MYL6BP14649 208 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 ARHGAP45Q92619 1136 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 ZNF496Q96IT1 587 aaPredicted RBP8.83□□□□□ -1
LYSMD3-201ENST00000315948 STK31Q9BXU1 1019 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 TATP17735 454 aaPredicted RBP8.83□□□□□ -1
LYSMD3-201ENST00000315948 API5Q9BZZ5 524 aaKnown RBP8.83□□□□□ -1
LYSMD3-201ENST00000315948 COL18A1P39060 1754 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 PI4KAP2A4QPH2 592 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 HTATSF1O43719 755 aaKnown RBP8.83□□□□□ -1
LYSMD3-201ENST00000315948 PI4KAP1Q8N8J0 262 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 LRRC37A3O60309 1634 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 INTS3Q68E01 1043 aaKnown RBP8.83□□□□□ -1
LYSMD3-201ENST00000315948 USP16Q9Y5T5 823 aa8.83□□□□□ -1
LYSMD3-201ENST00000315948 NCOA3Q9Y6Q9 1424 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 GIGYF1O75420 1035 aaPredicted RBP8.82□□□□□ -1
LYSMD3-201ENST00000315948 HDAC1Q13547 482 aaPredicted RBP8.82□□□□□ -1
LYSMD3-201ENST00000315948 AMOTQ4VCS5 1084 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 PNMA6EA0A0J9YXQ4 647 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 PTCD1O75127 700 aaKnown RBP8.82□□□□□ -1
LYSMD3-201ENST00000315948 EVA1CP58658 441 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 CWF19L2Q2TBE0 894 aaKnown RBP8.82□□□□□ -1
LYSMD3-201ENST00000315948 FAM161AQ3B820 660 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 CCDC30Q5VVM6 783 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 SMC5Q8IY18 1101 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 NBPF7P0C2Y1 421 aaPredicted RBP8.82□□□□□ -1
LYSMD3-201ENST00000315948 MS4A1P11836 297 aa8.82□□□□□ -1
LYSMD3-201ENST00000315948 NCAPD2Q15021 1401 aa8.81□□□□□ -1
LYSMD3-201ENST00000315948 CEP85Q6P2H3 762 aa8.81□□□□□ -1
LYSMD3-201ENST00000315948 ZNF790Q6PG37 636 aa8.81□□□□□ -1
LYSMD3-201ENST00000315948 EXOC6BQ9Y2D4 811 aa8.81□□□□□ -1
LYSMD3-201ENST00000315948 FAM208AQ9UK61 1670 aaKnown RBP8.81□□□□□ -1
LYSMD3-201ENST00000315948 ATP10DQ9P241 1426 aa8.81□□□□□ -1
LYSMD3-201ENST00000315948 SLC52A2Q9HAB3 445 aa8.81□□□□□ -1
LYSMD3-201ENST00000315948 WDR17Q8IZU2 1322 aa8.81□□□□□ -1
LYSMD3-201ENST00000315948 COL5A2P05997 1499 aaPredicted RBP8.81□□□□□ -1
LYSMD3-201ENST00000315948 CRYBG1Q9Y4K1 1723 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 LRRFIP2Q9Y608 721 aaKnown RBP8.8□□□□□ -1
LYSMD3-201ENST00000315948 KAT6BQ8WYB5 2073 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 A0A0G2JS52 829 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 NUCB1Q02818 461 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 CHD1LQ86WJ1 897 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 USP44Q9H0E7 712 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 PDIA6Q15084 440 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
LYSMD3-201ENST00000315948 IFNL2Q8IZJ0 200 aa8.8□□□□□ -1
LYSMD3-201ENST00000315948 CPDO75976 1380 aa8.79□□□□□ -1
LYSMD3-201ENST00000315948 PTPRCP08575 1304 aa8.79□□□□□ -1
LYSMD3-201ENST00000315948 SPG7Q9UQ90 795 aa8.79□□□□□ -1
LYSMD3-201ENST00000315948 ADCY9O60503 1353 aa8.79□□□□□ -1
LYSMD3-201ENST00000315948 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
LYSMD3-201ENST00000315948 MAP3K2Q9Y2U5 619 aa8.79□□□□□ -1
LYSMD3-201ENST00000315948 CABP4P57796 275 aa8.78□□□□□ -1
LYSMD3-201ENST00000315948 LMO7Q8WWI1 1683 aa8.78□□□□□ -1
LYSMD3-201ENST00000315948 ROBO1Q9Y6N7 1651 aa8.78□□□□□ -1
LYSMD3-201ENST00000315948 ANP32AP39687 249 aaKnown RBP8.78□□□□□ -1
LYSMD3-201ENST00000315948 ZNF330Q9Y3S2 320 aaPredicted RBP8.78□□□□□ -1
LYSMD3-201ENST00000315948 SYTL4Q96C24 671 aaPredicted RBP8.77□□□□□ -1
LYSMD3-201ENST00000315948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.77□□□□□ -1
LYSMD3-201ENST00000315948 IL2RBP14784 551 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 MFAP1P55081 439 aaKnown RBP8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 ANKRD44Q8N8A2 993 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 ASAP1Q9ULH1 1129 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 A1BGP04217 495 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 IPO9Q96P70 1041 aaKnown RBP8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 VIRMAQ69YN4 1812 aaKnown RBP8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 GSPT1P15170 499 aaKnown RBP8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 FAM182BQ5T319 152 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 BEND3Q5T5X7 828 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 XAGE3Q8WTP9 111 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 DCAF5Q96JK2 942 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 IL1RAPL2Q9NP60 686 aa8.77□□□□□ -1.01
LYSMD3-201ENST00000315948 COPS6Q7L5N1 327 aa8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 KLHDC4Q8TBB5 520 aa8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 OVOS2A0A0G2JMS6 1433 aa8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 DNAAF4Q8WXU2 420 aa8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 LTBP4Q8N2S1 1624 aa8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 DCTPP1Q9H773 170 aa8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 HEG1Q9ULI3 1381 aa8.76□□□□□ -1.01
LYSMD3-201ENST00000315948 KDM3BQ7LBC6 1761 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms