RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 SIK1P57059 783 aa16.8■□□□□ 0.28
TPT1-201ENST00000309246 LINC00116Q8NCU8 138 aa16.8■□□□□ 0.28
TPT1-201ENST00000309246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.284e-45■□□□□ 9.6
TPT1-201ENST00000309246 UTRNP46939 3433 aa16.79■□□□□ 0.28
TPT1-201ENST00000309246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.79■□□□□ 0.28
TPT1-201ENST00000309246 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
TPT1-201ENST00000309246 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
TPT1-201ENST00000309246 ASAP1Q9ULH1 1129 aa16.79■□□□□ 0.28
TPT1-201ENST00000309246 GRIN3BO60391 1043 aa16.78■□□□□ 0.28
TPT1-201ENST00000309246 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
TPT1-201ENST00000309246 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
TPT1-201ENST00000309246 COL5A3P25940 1745 aaPredicted RBP16.78■□□□□ 0.28
TPT1-201ENST00000309246 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
TPT1-201ENST00000309246 EIF4G2P78344 907 aaKnown RBP eCLIP16.77■□□□□ 0.28
TPT1-201ENST00000309246 ITPK1Q13572 414 aa16.77■□□□□ 0.28
TPT1-201ENST00000309246 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
TPT1-201ENST00000309246 ZNF831Q5JPB2 1677 aa16.76■□□□□ 0.27
TPT1-201ENST00000309246 SSFA2P28290 1259 aa16.76■□□□□ 0.27
TPT1-201ENST00000309246 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
TPT1-201ENST00000309246 GNPATO15228 680 aa16.75■□□□□ 0.27
TPT1-201ENST00000309246 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
TPT1-201ENST00000309246 CAPN15O75808 1086 aa16.75■□□□□ 0.27
TPT1-201ENST00000309246 PANK3Q9H999 370 aa16.75■□□□□ 0.27
TPT1-201ENST00000309246 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
TPT1-201ENST00000309246 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
TPT1-201ENST00000309246 KIF13BQ9NQT8 1826 aa16.74■□□□□ 0.27
TPT1-201ENST00000309246 KDRP35968 1356 aa16.74■□□□□ 0.27
TPT1-201ENST00000309246 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
TPT1-201ENST00000309246 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
TPT1-201ENST00000309246 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
TPT1-201ENST00000309246 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
TPT1-201ENST00000309246 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
TPT1-201ENST00000309246 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
TPT1-201ENST00000309246 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
TPT1-201ENST00000309246 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
TPT1-201ENST00000309246 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
TPT1-201ENST00000309246 ATP10DQ9P241 1426 aa16.72■□□□□ 0.27
TPT1-201ENST00000309246 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
TPT1-201ENST00000309246 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
TPT1-201ENST00000309246 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
TPT1-201ENST00000309246 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
TPT1-201ENST00000309246 ERVV-2B6SEH9 535 aa16.7■□□□□ 0.26
TPT1-201ENST00000309246 PLEKHO1Q53GL0 409 aaPredicted RBP16.7■□□□□ 0.26
TPT1-201ENST00000309246 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
TPT1-201ENST00000309246 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
TPT1-201ENST00000309246 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
TPT1-201ENST00000309246 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
TPT1-201ENST00000309246 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
TPT1-201ENST00000309246 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
TPT1-201ENST00000309246 TJP1Q07157 1748 aa16.69■□□□□ 0.26
TPT1-201ENST00000309246 ADCY9O60503 1353 aa16.68■□□□□ 0.26
TPT1-201ENST00000309246 MMP10P09238 476 aa16.67■□□□□ 0.26
TPT1-201ENST00000309246 CABP4P57796 275 aa16.67■□□□□ 0.26
TPT1-201ENST00000309246 CCER1Q8TC90 406 aaPredicted RBP16.67■□□□□ 0.26
TPT1-201ENST00000309246 RTCBQ9Y3I0 505 aaKnown RBP16.67■□□□□ 0.26
TPT1-201ENST00000309246 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
TPT1-201ENST00000309246 AMOTQ4VCS5 1084 aa16.66■□□□□ 0.26
TPT1-201ENST00000309246 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
TPT1-201ENST00000309246 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
TPT1-201ENST00000309246 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
TPT1-201ENST00000309246 MTHFSP49914 203 aa16.65■□□□□ 0.26
TPT1-201ENST00000309246 C1orf141Q5JVX7 400 aa16.65■□□□□ 0.26
TPT1-201ENST00000309246 SULT6B1Q6IMI4 303 aa16.65■□□□□ 0.26
TPT1-201ENST00000309246 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
TPT1-201ENST00000309246 GOLGB1Q14789 3259 aaKnown RBP16.65■□□□□ 0.26
TPT1-201ENST00000309246 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
TPT1-201ENST00000309246 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
TPT1-201ENST00000309246 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
TPT1-201ENST00000309246 GPBP1L1Q9HC44 474 aaPredicted RBP16.64■□□□□ 0.25
TPT1-201ENST00000309246 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
TPT1-201ENST00000309246 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
TPT1-201ENST00000309246 RPS6KA4O75676 772 aa16.62■□□□□ 0.25
TPT1-201ENST00000309246 GYS1P13807 737 aa16.62■□□□□ 0.25
TPT1-201ENST00000309246 IL13P35225 146 aa16.62■□□□□ 0.25
TPT1-201ENST00000309246 NLGN1Q8N2Q7 840 aa16.62■□□□□ 0.25
TPT1-201ENST00000309246 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
TPT1-201ENST00000309246 ARFGEF1Q9Y6D6 1849 aa16.61■□□□□ 0.25
TPT1-201ENST00000309246 RFC4P35249 363 aa16.61■□□□□ 0.25
TPT1-201ENST00000309246 ADAMTS7Q9UKP4 1686 aa16.61■□□□□ 0.25
TPT1-201ENST00000309246 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
TPT1-201ENST00000309246 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
TPT1-201ENST00000309246 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
TPT1-201ENST00000309246 TGFB2P61812 414 aa16.59■□□□□ 0.25
TPT1-201ENST00000309246 CCDC87Q9NVE4 849 aa16.59■□□□□ 0.25
TPT1-201ENST00000309246 SRP68Q9UHB9 627 aaKnown RBP16.59■□□□□ 0.25
TPT1-201ENST00000309246 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
TPT1-201ENST00000309246 KIF7Q2M1P5 1343 aa16.59■□□□□ 0.25
TPT1-201ENST00000309246 PARP3Q9Y6F1 533 aa16.58■□□□□ 0.24
TPT1-201ENST00000309246 MRC1P22897 1456 aa16.58■□□□□ 0.24
TPT1-201ENST00000309246 DPEP1P16444 411 aa16.57■□□□□ 0.24
TPT1-201ENST00000309246 AFDNP55196 1824 aaKnown RBP16.56■□□□□ 0.24
TPT1-201ENST00000309246 HMOX1P09601 288 aa16.56■□□□□ 0.24
TPT1-201ENST00000309246 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
TPT1-201ENST00000309246 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
TPT1-201ENST00000309246 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
TPT1-201ENST00000309246 LGR6Q9HBX8 967 aa16.55■□□□□ 0.24
TPT1-201ENST00000309246 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
TPT1-201ENST00000309246 FCHSD2O94868 740 aa16.54■□□□□ 0.24
TPT1-201ENST00000309246 FKBP8Q14318 412 aa16.54■□□□□ 0.24
TPT1-201ENST00000309246 INTS5Q6P9B9 1019 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms