RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 C1orf141Q5JVX7 400 aa22.82■■□□□ 1.24
GABRB1-201ENST00000295454 CCDC30Q5VVM6 783 aa22.82■■□□□ 1.24
GABRB1-201ENST00000295454 MEIS3Q99687 375 aa22.82■■□□□ 1.24
GABRB1-201ENST00000295454 N4BP2Q86UW6 1770 aaPredicted RBP22.82■■□□□ 1.24
GABRB1-201ENST00000295454 EIF4A1P60842 406 aaKnown RBP22.82■■□□□ 1.24
GABRB1-201ENST00000295454 LNPKQ9C0E8 428 aa22.82■■□□□ 1.24
GABRB1-201ENST00000295454 FLIIQ13045 1269 aa22.81■■□□□ 1.24
GABRB1-201ENST00000295454 SLC4A10Q6U841 1118 aa22.81■■□□□ 1.24
GABRB1-201ENST00000295454 TEFQ10587 303 aa22.81■■□□□ 1.24
GABRB1-201ENST00000295454 ANP32EQ9BTT0 268 aa22.81■■□□□ 1.24
GABRB1-201ENST00000295454 ABCC6O95255 1503 aa22.8■■□□□ 1.24
GABRB1-201ENST00000295454 SCN11AQ9UI33 1791 aa22.8■■□□□ 1.24
GABRB1-201ENST00000295454 BTBD11A6QL63 1104 aa22.79■■□□□ 1.24
GABRB1-201ENST00000295454 HDGFL1Q5TGJ6 251 aa22.79■■□□□ 1.24
GABRB1-201ENST00000295454 OVOS2A0A0G2JMS6 1433 aa22.79■■□□□ 1.24
GABRB1-201ENST00000295454 CPDO75976 1380 aa22.79■■□□□ 1.24
GABRB1-201ENST00000295454 SOS2Q07890 1332 aaPredicted RBP22.79■■□□□ 1.24
GABRB1-201ENST00000295454 CSB-PGBD3P0DP91 1061 aa22.79■■□□□ 1.24
GABRB1-201ENST00000295454 ERICH6Q7L0X2 663 aa22.78■■□□□ 1.24
GABRB1-201ENST00000295454 CHD1LQ86WJ1 897 aa22.78■■□□□ 1.24
GABRB1-201ENST00000295454 FKBP5Q13451 457 aaPredicted RBP22.78■■□□□ 1.24
GABRB1-201ENST00000295454 NHSL1Q5SYE7 1610 aa22.77■■□□□ 1.24
GABRB1-201ENST00000295454 EIF2S2P20042 333 aaKnown RBP22.77■■□□□ 1.24
GABRB1-201ENST00000295454 ANKRD45Q5TZF3 282 aa22.77■■□□□ 1.24
GABRB1-201ENST00000295454 PHAXQ9H814 394 aaKnown RBP22.77■■□□□ 1.24
GABRB1-201ENST00000295454 PKD1L3Q7Z443 1732 aa22.77■■□□□ 1.24
GABRB1-201ENST00000295454 KDM6AO15550 1401 aaPredicted RBP22.77■■□□□ 1.24
GABRB1-201ENST00000295454 SOS1Q07889 1333 aaPredicted RBP22.77■■□□□ 1.23
GABRB1-201ENST00000295454 RAPGEF4Q8WZA2 1011 aa22.76■■□□□ 1.23
GABRB1-201ENST00000295454 CEP85Q6P2H3 762 aa22.76■■□□□ 1.23
GABRB1-201ENST00000295454 GCC1Q96CN9 775 aa22.76■■□□□ 1.23
GABRB1-201ENST00000295454 ZBTB47Q9UFB7 747 aaPredicted RBP22.75■■□□□ 1.23
GABRB1-201ENST00000295454 ANKRD44Q8N8A2 993 aa22.75■■□□□ 1.23
GABRB1-201ENST00000295454 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
GABRB1-201ENST00000295454 CCT4P50991 539 aaKnown RBP22.73■■□□□ 1.23
GABRB1-201ENST00000295454 CHPF2Q9P2E5 772 aa22.73■■□□□ 1.23
GABRB1-201ENST00000295454 PRAMEF22A3QJZ6 481 aa22.73■■□□□ 1.23
GABRB1-201ENST00000295454 ANXA1P04083 346 aa22.73■■□□□ 1.23
GABRB1-201ENST00000295454 C5P01031 1676 aa22.73■■□□□ 1.23
GABRB1-201ENST00000295454 PHKG2P15735 406 aa22.72■■□□□ 1.23
GABRB1-201ENST00000295454 DCTPP1Q9H773 170 aa22.7■■□□□ 1.23
GABRB1-201ENST00000295454 PRDM11Q9NQV5 511 aa22.7■■□□□ 1.23
GABRB1-201ENST00000295454 PXDNLA1KZ92 1463 aa22.7■■□□□ 1.22
GABRB1-201ENST00000295454 HEG1Q9ULI3 1381 aa22.69■■□□□ 1.22
GABRB1-201ENST00000295454 HOXB7P09629 217 aa22.69■■□□□ 1.22
GABRB1-201ENST00000295454 RPAP2Q8IXW5 612 aaPredicted RBP22.69■■□□□ 1.22
GABRB1-201ENST00000295454 COL5A2P05997 1499 aaPredicted RBP22.68■■□□□ 1.22
GABRB1-201ENST00000295454 CYP27B1O15528 508 aa22.68■■□□□ 1.22
GABRB1-201ENST00000295454 SLC39A6Q13433 755 aa22.68■■□□□ 1.22
GABRB1-201ENST00000295454 SPG7Q9UQ90 795 aa22.68■■□□□ 1.22
GABRB1-201ENST00000295454 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
GABRB1-201ENST00000295454 GIGYF1O75420 1035 aaPredicted RBP22.67■■□□□ 1.22
GABRB1-201ENST00000295454 SLC4A3P48751 1232 aa22.67■■□□□ 1.22
GABRB1-201ENST00000295454 PROSER3Q2NL68 480 aa22.67■■□□□ 1.22
GABRB1-201ENST00000295454 BCL11AQ9H165 835 aa22.67■■□□□ 1.22
GABRB1-201ENST00000295454 SLC52A2Q9HAB3 445 aa22.66■■□□□ 1.22
GABRB1-201ENST00000295454 DDRGK1Q96HY6 314 aa22.65■■□□□ 1.22
GABRB1-201ENST00000295454 WDR17Q8IZU2 1322 aa22.65■■□□□ 1.22
GABRB1-201ENST00000295454 MRC1P22897 1456 aa22.65■■□□□ 1.22
GABRB1-201ENST00000295454 APBB1O00213 710 aa22.64■■□□□ 1.22
GABRB1-201ENST00000295454 IFNL2Q8IZJ0 200 aa22.64■■□□□ 1.22
GABRB1-201ENST00000295454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.64■■□□□ 1.22
GABRB1-201ENST00000295454 SHANK3Q9BYB0 1731 aa22.64■■□□□ 1.21
GABRB1-201ENST00000295454 ADCY9O60503 1353 aa22.64■■□□□ 1.21
GABRB1-201ENST00000295454 SMARCA5O60264 1052 aaPredicted RBP22.64■■□□□ 1.21
GABRB1-201ENST00000295454 C16orf71Q8IYS4 520 aaPredicted RBP22.64■■□□□ 1.21
GABRB1-201ENST00000295454 NFATC2IPQ8NCF5 419 aa22.64■■□□□ 1.21
GABRB1-201ENST00000295454 GNAI2P04899 355 aa22.63■■□□□ 1.21
GABRB1-201ENST00000295454 OTUD7AQ8TE49 926 aaPredicted RBP22.63■■□□□ 1.21
GABRB1-201ENST00000295454 TOM1L2Q6ZVM7 507 aa22.62■■□□□ 1.21
GABRB1-201ENST00000295454 USP44Q9H0E7 712 aa22.62■■□□□ 1.21
GABRB1-201ENST00000295454 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
GABRB1-201ENST00000295454 PI4KAP2A4QPH2 592 aa22.61■■□□□ 1.21
GABRB1-201ENST00000295454 ZNF790Q6PG37 636 aa22.61■■□□□ 1.21
GABRB1-201ENST00000295454 PI4KAP1Q8N8J0 262 aa22.61■■□□□ 1.21
GABRB1-201ENST00000295454 LRRFIP2Q9Y608 721 aaKnown RBP22.61■■□□□ 1.21
GABRB1-201ENST00000295454 GLI3P10071 1580 aa22.6■■□□□ 1.21
GABRB1-201ENST00000295454 PNMA6EA0A0J9YXQ4 647 aa22.6■■□□□ 1.21
GABRB1-201ENST00000295454 GNAI3P08754 354 aa22.6■■□□□ 1.21
GABRB1-201ENST00000295454 MFAP1P55081 439 aaKnown RBP22.6■■□□□ 1.21
GABRB1-201ENST00000295454 BMP2KLQ5H9B9 411 aa22.6■■□□□ 1.21
GABRB1-201ENST00000295454 PLEKHM2Q8IWE5 1019 aa22.6■■□□□ 1.21
GABRB1-201ENST00000295454 TBC1D32Q96NH3 1257 aa22.6■■□□□ 1.21
GABRB1-201ENST00000295454 STRN4Q9NRL3 753 aa22.6■■□□□ 1.21
GABRB1-201ENST00000295454 DBF4Q9UBU7 674 aaPredicted RBP22.59■■□□□ 1.21
GABRB1-201ENST00000295454 BEND3Q5T5X7 828 aa22.58■■□□□ 1.21
GABRB1-201ENST00000295454 LARP1Q6PKG0 1096 aaKnown RBP22.58■■□□□ 1.21
GABRB1-201ENST00000295454 DNAAF4Q8WXU2 420 aa22.58■■□□□ 1.21
GABRB1-201ENST00000295454 DCAF5Q96JK2 942 aa22.58■■□□□ 1.21
GABRB1-201ENST00000295454 PLEKHG2Q9H7P9 1386 aa22.58■■□□□ 1.21
GABRB1-201ENST00000295454 SRCIN1Q9C0H9 1055 aa22.58■■□□□ 1.2
GABRB1-201ENST00000295454 GSPT1P15170 499 aaKnown RBP22.57■■□□□ 1.2
GABRB1-201ENST00000295454 EXOC6BQ9Y2D4 811 aa22.57■■□□□ 1.2
GABRB1-201ENST00000295454 PDIA6Q15084 440 aa22.57■■□□□ 1.2
GABRB1-201ENST00000295454 ZNF496Q96IT1 587 aaPredicted RBP22.57■■□□□ 1.2
GABRB1-201ENST00000295454 HMMRO75330 724 aa22.56■■□□□ 1.2
GABRB1-201ENST00000295454 UBTFL1P0CB47 393 aaPredicted RBP22.55■■□□□ 1.2
GABRB1-201ENST00000295454 NBPF7P0C2Y1 421 aaPredicted RBP22.55■■□□□ 1.2
GABRB1-201ENST00000295454 ATP8B2P98198 1209 aa22.55■■□□□ 1.2
GABRB1-201ENST00000295454 UPF2Q9HAU5 1272 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms