RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 RNMTO43148 476 aaKnown RBP29.12■■■□□ 2.25
RAB40B-201ENST00000269347 PHAXQ9H814 394 aaKnown RBP29.12■■■□□ 2.25
RAB40B-201ENST00000269347 CACNA1FO60840 1977 aa29.11■■■□□ 2.25
RAB40B-201ENST00000269347 BABAM1Q9NWV8 329 aa29.11■■■□□ 2.25
RAB40B-201ENST00000269347 CCDC30Q5VVM6 783 aa29.1■■■□□ 2.25
RAB40B-201ENST00000269347 CEP85Q6P2H3 762 aa29.1■■■□□ 2.25
RAB40B-201ENST00000269347 SIPA1L3O60292 1781 aaPredicted RBP29.1■■■□□ 2.25
RAB40B-201ENST00000269347 CHMP4BQ9H444 224 aaKnown RBP29.09■■■□□ 2.25
RAB40B-201ENST00000269347 STK31Q9BXU1 1019 aa29.09■■■□□ 2.25
RAB40B-201ENST00000269347 MEGF6O75095 1541 aa29.08■■■□□ 2.25
RAB40B-201ENST00000269347 ANKRD44Q8N8A2 993 aa29.08■■■□□ 2.25
RAB40B-201ENST00000269347 GCC1Q96CN9 775 aa29.08■■■□□ 2.25
RAB40B-201ENST00000269347 AMOTQ4VCS5 1084 aa29.08■■■□□ 2.25
RAB40B-201ENST00000269347 NLRP2Q9NX02 1062 aa29.07■■■□□ 2.24
RAB40B-201ENST00000269347 PRAMEF22A3QJZ6 481 aa29.06■■■□□ 2.24
RAB40B-201ENST00000269347 EIF2S2P20042 333 aaKnown RBP29.06■■■□□ 2.24
RAB40B-201ENST00000269347 FKBP5Q13451 457 aaPredicted RBP29.06■■■□□ 2.24
RAB40B-201ENST00000269347 HDGFL1Q5TGJ6 251 aa29.06■■■□□ 2.24
RAB40B-201ENST00000269347 BTBD11A6QL63 1104 aa29.06■■■□□ 2.24
RAB40B-201ENST00000269347 ANXA1P04083 346 aa29.06■■■□□ 2.24
RAB40B-201ENST00000269347 ADAMTS7Q9UKP4 1686 aa29.06■■■□□ 2.24
RAB40B-201ENST00000269347 TEFQ10587 303 aa29.05■■■□□ 2.24
RAB40B-201ENST00000269347 DCTPP1Q9H773 170 aa29.05■■■□□ 2.24
RAB40B-201ENST00000269347 C1orf141Q5JVX7 400 aa29.03■■■□□ 2.24
RAB40B-201ENST00000269347 C16orf71Q8IYS4 520 aaPredicted RBP29.02■■■□□ 2.24
RAB40B-201ENST00000269347 N4BP2Q86UW6 1770 aaPredicted RBP29.02■■■□□ 2.24
RAB40B-201ENST00000269347 BCL11AQ9H165 835 aa29.02■■■□□ 2.24
RAB40B-201ENST00000269347 CHPF2Q9P2E5 772 aa29.02■■■□□ 2.24
RAB40B-201ENST00000269347 KDM6AO15550 1401 aaPredicted RBP29.02■■■□□ 2.24
RAB40B-201ENST00000269347 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
RAB40B-201ENST00000269347 CCT4P50991 539 aaKnown RBP29■■■□□ 2.23
RAB40B-201ENST00000269347 OTUD7AQ8TE49 926 aaPredicted RBP29■■■□□ 2.23
RAB40B-201ENST00000269347 DDRGK1Q96HY6 314 aa28.99■■■□□ 2.23
RAB40B-201ENST00000269347 SCN11AQ9UI33 1791 aa28.99■■■□□ 2.23
RAB40B-201ENST00000269347 SMARCA5O60264 1052 aaPredicted RBP28.98■■■□□ 2.23
RAB40B-201ENST00000269347 RPAP2Q8IXW5 612 aaPredicted RBP28.98■■■□□ 2.23
RAB40B-201ENST00000269347 SOS1Q07889 1333 aaPredicted RBP28.98■■■□□ 2.23
RAB40B-201ENST00000269347 PROSER3Q2NL68 480 aa28.97■■■□□ 2.23
RAB40B-201ENST00000269347 TBC1D32Q96NH3 1257 aa28.97■■■□□ 2.23
RAB40B-201ENST00000269347 HEG1Q9ULI3 1381 aa28.97■■■□□ 2.23
RAB40B-201ENST00000269347 SOS2Q07890 1332 aaPredicted RBP28.97■■■□□ 2.23
RAB40B-201ENST00000269347 CSB-PGBD3P0DP91 1061 aa28.96■■■□□ 2.23
RAB40B-201ENST00000269347 APBB1O00213 710 aa28.96■■■□□ 2.23
RAB40B-201ENST00000269347 NBR1Q14596 966 aa28.96■■■□□ 2.23
RAB40B-201ENST00000269347 OVOS2A0A0G2JMS6 1433 aa28.96■■■□□ 2.23
RAB40B-201ENST00000269347 SLC39A6Q13433 755 aa28.95■■■□□ 2.23
RAB40B-201ENST00000269347 RAPGEF4Q8WZA2 1011 aa28.95■■■□□ 2.23
RAB40B-201ENST00000269347 CPDO75976 1380 aa28.95■■■□□ 2.23
RAB40B-201ENST00000269347 GIGYF1O75420 1035 aaPredicted RBP28.94■■■□□ 2.22
RAB40B-201ENST00000269347 PHKG2P15735 406 aa28.94■■■□□ 2.22
RAB40B-201ENST00000269347 PLEKHM2Q8IWE5 1019 aa28.94■■■□□ 2.22
RAB40B-201ENST00000269347 MFAP1P55081 439 aaKnown RBP28.94■■■□□ 2.22
RAB40B-201ENST00000269347 USP44Q9H0E7 712 aa28.94■■■□□ 2.22
RAB40B-201ENST00000269347 CYP27B1O15528 508 aa28.93■■■□□ 2.22
RAB40B-201ENST00000269347 GSPT1P15170 499 aaKnown RBP28.93■■■□□ 2.22
RAB40B-201ENST00000269347 ABCA3Q99758 1704 aa28.93■■■□□ 2.22
RAB40B-201ENST00000269347 PNMA6EA0A0J9YXQ4 647 aa28.92■■■□□ 2.22
RAB40B-201ENST00000269347 C5P01031 1676 aa28.91■■■□□ 2.22
RAB40B-201ENST00000269347 HOXB7P09629 217 aa28.91■■■□□ 2.22
RAB40B-201ENST00000269347 TATP17735 454 aaPredicted RBP28.91■■■□□ 2.22
RAB40B-201ENST00000269347 BMP2KLQ5H9B9 411 aa28.91■■■□□ 2.22
RAB40B-201ENST00000269347 PKD1L3Q7Z443 1732 aa28.9■■■□□ 2.22
RAB40B-201ENST00000269347 PXDNLA1KZ92 1463 aa28.9■■■□□ 2.22
RAB40B-201ENST00000269347 ADCY9O60503 1353 aa28.9■■■□□ 2.22
RAB40B-201ENST00000269347 GNAI2P04899 355 aa28.89■■■□□ 2.22
RAB40B-201ENST00000269347 NFATC2IPQ8NCF5 419 aa28.89■■■□□ 2.22
RAB40B-201ENST00000269347 LRRFIP2Q9Y608 721 aaKnown RBP28.89■■■□□ 2.22
RAB40B-201ENST00000269347 ABCC6O95255 1503 aa28.89■■■□□ 2.21
RAB40B-201ENST00000269347 PI4KAP2A4QPH2 592 aa28.88■■■□□ 2.21
RAB40B-201ENST00000269347 PI4KAP1Q8N8J0 262 aa28.88■■■□□ 2.21
RAB40B-201ENST00000269347 SLC52A2Q9HAB3 445 aa28.87■■■□□ 2.21
RAB40B-201ENST00000269347 EXOC6BQ9Y2D4 811 aa28.86■■■□□ 2.21
RAB40B-201ENST00000269347 PRDM11Q9NQV5 511 aa28.85■■■□□ 2.21
RAB40B-201ENST00000269347 BEND3Q5T5X7 828 aa28.85■■■□□ 2.21
RAB40B-201ENST00000269347 NBPF7P0C2Y1 421 aaPredicted RBP28.84■■■□□ 2.21
RAB40B-201ENST00000269347 NHSL1Q5SYE7 1610 aa28.84■■■□□ 2.21
RAB40B-201ENST00000269347 PDIA6Q15084 440 aa28.84■■■□□ 2.21
RAB40B-201ENST00000269347 ZNF790Q6PG37 636 aa28.84■■■□□ 2.21
RAB40B-201ENST00000269347 C22orf23Q9BZE7 217 aa28.84■■■□□ 2.21
RAB40B-201ENST00000269347 SPG7Q9UQ90 795 aa28.84■■■□□ 2.21
RAB40B-201ENST00000269347 COL5A2P05997 1499 aaPredicted RBP28.83■■■□□ 2.21
RAB40B-201ENST00000269347 TBC1D9Q6ZT07 1266 aa28.82■■■□□ 2.2
RAB40B-201ENST00000269347 IFNL2Q8IZJ0 200 aa28.82■■■□□ 2.2
RAB40B-201ENST00000269347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.82■■■□□ 2.2
RAB40B-201ENST00000269347 ATP8B2P98198 1209 aa28.82■■■□□ 2.2
RAB40B-201ENST00000269347 DNAAF4Q8WXU2 420 aa28.82■■■□□ 2.2
RAB40B-201ENST00000269347 GNAI3P08754 354 aa28.81■■■□□ 2.2
RAB40B-201ENST00000269347 DBF4Q9UBU7 674 aaPredicted RBP28.81■■■□□ 2.2
RAB40B-201ENST00000269347 WDR17Q8IZU2 1322 aa28.8■■■□□ 2.2
RAB40B-201ENST00000269347 TTC22Q5TAA0 569 aa28.8■■■□□ 2.2
RAB40B-201ENST00000269347 SRCIN1Q9C0H9 1055 aa28.8■■■□□ 2.2
RAB40B-201ENST00000269347 UPF2Q9HAU5 1272 aaKnown RBP28.8■■■□□ 2.2
RAB40B-201ENST00000269347 ZNF496Q96IT1 587 aaPredicted RBP28.79■■■□□ 2.2
RAB40B-201ENST00000269347 MRC1P22897 1456 aa28.79■■■□□ 2.2
RAB40B-201ENST00000269347 GLI3P10071 1580 aa28.78■■■□□ 2.2
RAB40B-201ENST00000269347 TSHZ3Q63HK5 1081 aa28.78■■■□□ 2.2
RAB40B-201ENST00000269347 HMMRO75330 724 aa28.77■■■□□ 2.2
RAB40B-201ENST00000269347 UBTFL1P0CB47 393 aaPredicted RBP28.77■■■□□ 2.2
RAB40B-201ENST00000269347 PIP4K2AP48426 406 aaPredicted RBP28.77■■■□□ 2.2
RAB40B-201ENST00000269347 MAP3K2Q9Y2U5 619 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms