RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 SERPINC1P01008 464 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 CCT4P50991 539 aaKnown RBP18.62■□□□□ 0.57
SHANK3-201ENST00000262795 FAM177A1Q8N128 213 aaPredicted RBP18.62■□□□□ 0.57
SHANK3-201ENST00000262795 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 MYO6Q9UM54 1294 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 NME9Q86XW9 330 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 DNAI2Q9GZS0 605 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 NAPBQ9H115 298 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 PUF60Q9UHX1 559 aaKnown RBP18.62■□□□□ 0.57
SHANK3-201ENST00000262795 NAIPQ13075 1403 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 C22orf23Q9BZE7 217 aa18.62■□□□□ 0.57
SHANK3-201ENST00000262795 SKOR2Q2VWA4 1001 aaPredicted RBP18.61■□□□□ 0.57
SHANK3-201ENST00000262795 CDR1P51861 262 aa18.61■□□□□ 0.57
SHANK3-201ENST00000262795 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
SHANK3-201ENST00000262795 MMRN2Q9H8L6 949 aa18.61■□□□□ 0.57
SHANK3-201ENST00000262795 CYP46A1Q9Y6A2 500 aa18.61■□□□□ 0.57
SHANK3-201ENST00000262795 IMMTQ16891 758 aaKnown RBP18.61■□□□□ 0.57
SHANK3-201ENST00000262795 CENPHQ9H3R5 247 aa18.61■□□□□ 0.57
SHANK3-201ENST00000262795 ZNHIT6Q9NWK9 470 aaKnown RBP18.61■□□□□ 0.57
SHANK3-201ENST00000262795 TAX1BP1Q86VP1 789 aa18.6■□□□□ 0.57
SHANK3-201ENST00000262795 SPTY2D1Q68D10 685 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-201ENST00000262795 FERMT2Q96AC1 680 aa18.6■□□□□ 0.57
SHANK3-201ENST00000262795 KIF20AO95235 890 aa18.6■□□□□ 0.57
SHANK3-201ENST00000262795 DDB1Q16531 1140 aa18.6■□□□□ 0.57
SHANK3-201ENST00000262795 SPC24Q8NBT2 197 aa18.59■□□□□ 0.57
SHANK3-201ENST00000262795 PPP2R1AP30153 589 aa18.59■□□□□ 0.57
SHANK3-201ENST00000262795 CCDC150Q8NCX0 1101 aa18.59■□□□□ 0.57
SHANK3-201ENST00000262795 BICD1Q96G01 975 aa18.59■□□□□ 0.57
SHANK3-201ENST00000262795 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
SHANK3-201ENST00000262795 CCDC8Q9H0W5 538 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-201ENST00000262795 CIZ1Q9ULV3 898 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-201ENST00000262795 AKAP2Q9Y2D5 859 aa18.59■□□□□ 0.57
SHANK3-201ENST00000262795 CDCA7LQ96GN5 454 aa18.58■□□□□ 0.57
SHANK3-201ENST00000262795 DPH6Q7L8W6 267 aa18.58■□□□□ 0.57
SHANK3-201ENST00000262795 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.57
SHANK3-201ENST00000262795 STK32BQ9NY57 414 aa18.58■□□□□ 0.56
SHANK3-201ENST00000262795 CSPG5O95196 566 aa18.58■□□□□ 0.56
SHANK3-201ENST00000262795 PPP1R42Q7Z4L9 355 aa18.58■□□□□ 0.56
SHANK3-201ENST00000262795 CEP57L1Q8IYX8 460 aa18.58■□□□□ 0.56
SHANK3-201ENST00000262795 TRIM5Q9C035 493 aa18.58■□□□□ 0.56
SHANK3-201ENST00000262795 JAKMIP1Q96N16 626 aaKnown RBP18.58■□□□□ 0.56
SHANK3-201ENST00000262795 MPHOSPH6Q99547 160 aaKnown RBP18.58■□□□□ 0.56
SHANK3-201ENST00000262795 SP4Q02446 784 aa18.57■□□□□ 0.56
SHANK3-201ENST00000262795 ANKRD24Q8TF21 1146 aa18.57■□□□□ 0.56
SHANK3-201ENST00000262795 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
SHANK3-201ENST00000262795 MAP3K12Q12852 859 aa18.57■□□□□ 0.56
SHANK3-201ENST00000262795 EHMT1Q9H9B1 1298 aa18.57■□□□□ 0.56
SHANK3-201ENST00000262795 GUCY1B3Q02153 619 aa18.57■□□□□ 0.56
SHANK3-201ENST00000262795 MYCP01106 439 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-201ENST00000262795 MRPS9P82933 396 aaKnown RBP18.57■□□□□ 0.56
SHANK3-201ENST00000262795 DUSP27Q5VZP5 1158 aa18.57■□□□□ 0.56
SHANK3-201ENST00000262795 MACROD2A1Z1Q3 448 aa18.56■□□□□ 0.56
SHANK3-201ENST00000262795 POTEJP0CG39 1038 aa18.56■□□□□ 0.56
SHANK3-201ENST00000262795 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
SHANK3-201ENST00000262795 MPNDQ8N594 471 aa18.56■□□□□ 0.56
SHANK3-201ENST00000262795 ATF7IPQ6VMQ6 1270 aa18.56■□□□□ 0.56
SHANK3-201ENST00000262795 NLRP5P59047 1200 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 TAF12Q16514 161 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 EPRSP07814 1512 aaKnown RBP18.55■□□□□ 0.56
SHANK3-201ENST00000262795 CADPS2Q86UW7 1296 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 CCDC61Q9Y6R9 512 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 A0A087WZG4 1122 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 SMARCA5O60264 1052 aaPredicted RBP18.55■□□□□ 0.56
SHANK3-201ENST00000262795 CDC5LQ99459 802 aaKnown RBP18.55■□□□□ 0.56
SHANK3-201ENST00000262795 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 FAM212AQ96EL1 285 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 PPFIA3O75145 1194 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 PRDM10Q9NQV6 1147 aa18.55■□□□□ 0.56
SHANK3-201ENST00000262795 EXOC6BQ9Y2D4 811 aa18.54■□□□□ 0.56
SHANK3-201ENST00000262795 IGF1RP08069 1367 aa18.54■□□□□ 0.56
SHANK3-201ENST00000262795 MSL1Q68DK7 614 aa18.54■□□□□ 0.56
SHANK3-201ENST00000262795 LRRFIP2Q9Y608 721 aaKnown RBP18.54■□□□□ 0.56
SHANK3-201ENST00000262795 CTNNBL1Q8WYA6 563 aaPredicted RBP18.54■□□□□ 0.56
SHANK3-201ENST00000262795 H0YHG0 523 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 LRSAM1Q6UWE0 723 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 USP8P40818 1118 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 DNA2P51530 1060 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 PPFIBP1Q86W92 1011 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 F6X3S4 739 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 CUX1P39880 1505 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 LARP1Q6PKG0 1096 aaKnown RBP18.53■□□□□ 0.56
SHANK3-201ENST00000262795 ATP2B3Q16720 1220 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 CTNNA3Q9UI47 895 aa18.53■□□□□ 0.56
SHANK3-201ENST00000262795 NIP7Q9Y221 180 aaKnown RBP eCLIP18.53■□□□□ 0.56
SHANK3-201ENST00000262795 NASPP49321 788 aaPredicted RBP18.52■□□□□ 0.56
SHANK3-201ENST00000262795 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
SHANK3-201ENST00000262795 ZRSR2Q15696 482 aaKnown RBP18.52■□□□□ 0.56
SHANK3-201ENST00000262795 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
SHANK3-201ENST00000262795 RBM25P49756 843 aaKnown RBP18.52■□□□□ 0.56
SHANK3-201ENST00000262795 TSPY2A6NKD2 308 aa18.52■□□□□ 0.56
SHANK3-201ENST00000262795 CDKL5O76039 1030 aa18.52■□□□□ 0.55
SHANK3-201ENST00000262795 LDHAL6AQ6ZMR3 332 aa18.52■□□□□ 0.55
SHANK3-201ENST00000262795 HOMER2Q9NSB8 354 aa18.52■□□□□ 0.55
SHANK3-201ENST00000262795 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.55
SHANK3-201ENST00000262795 ZBTB21Q9ULJ3 1066 aa18.52■□□□□ 0.55
SHANK3-201ENST00000262795 ERLIN2O94905 339 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 APBA3O96018 575 aa18.51■□□□□ 0.55
SHANK3-201ENST00000262795 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms