RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 UBAC1Q9BSL1 405 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 TOP1P11387 765 aaKnown RBP10.03□□□□□ -0.8
USP6-201ENST00000250066 NDC80O14777 642 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 SATB1Q01826 763 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
USP6-201ENST00000250066 CEP120Q8N960 986 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 FAM177BA6PVY3 158 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
USP6-201ENST00000250066 CHMP4BP1P59074 171 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 WASF1Q92558 559 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 GNAI3P08754 354 aa10.03□□□□□ -0.8
USP6-201ENST00000250066 TDRD12Q587J7 1177 aaKnown RBP10.03□□□□□ -0.8
USP6-201ENST00000250066 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
USP6-201ENST00000250066 SH3BP5O60239 455 aa10.02□□□□□ -0.8
USP6-201ENST00000250066 HSF2BPO75031 334 aa10.02□□□□□ -0.8
USP6-201ENST00000250066 ATP2C2O75185 946 aa10.02□□□□□ -0.8
USP6-201ENST00000250066 IRX3P78415 501 aaPredicted RBP10.02□□□□□ -0.8
USP6-201ENST00000250066 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 ANKRD30AQ9BXX3 1397 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 NOP2P46087 812 aaKnown RBP10.02□□□□□ -0.81
USP6-201ENST00000250066 CKAP4Q07065 602 aaKnown RBP10.02□□□□□ -0.81
USP6-201ENST00000250066 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 ZHX1Q9UKY1 873 aaPredicted RBP10.02□□□□□ -0.81
USP6-201ENST00000250066 ZSCAN25Q6NSZ9 544 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 RUNDC1Q96C34 613 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 UACAQ9BZF9 1416 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 CECR2Q9BXF3 1484 aa10.02□□□□□ -0.81
USP6-201ENST00000250066 CEP57Q86XR8 500 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 STIM2Q9P246 746 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 SEC63Q9UGP8 760 aaKnown RBP10.01□□□□□ -0.81
USP6-201ENST00000250066 GMNNO75496 209 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 CCDC174Q6PII3 467 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 MAP4K4O95819 1239 aaPredicted RBP10.01□□□□□ -0.81
USP6-201ENST00000250066 IVLP07476 585 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 TDO2P48775 406 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 BLOC1S2Q6QNY1 142 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 EPSTI1Q96J88 318 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 SRRTQ9BXP5 876 aaKnown RBP10.01□□□□□ -0.81
USP6-201ENST00000250066 KIF5BP33176 963 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 PANK1Q8TE04 598 aa10.01□□□□□ -0.81
USP6-201ENST00000250066 K7ELQ4 463 aaPredicted RBP10□□□□□ -0.81
USP6-201ENST00000250066 CCDC30Q5VVM6 783 aa10□□□□□ -0.81
USP6-201ENST00000250066 PLVAPQ9BX97 442 aa10□□□□□ -0.81
USP6-201ENST00000250066 PRDM2Q13029 1718 aa10□□□□□ -0.81
USP6-201ENST00000250066 KIAA0753Q2KHM9 967 aa10□□□□□ -0.81
USP6-201ENST00000250066 AEBP2Q6ZN18 517 aaPredicted RBP10□□□□□ -0.81
USP6-201ENST00000250066 CUX2O14529 1486 aa10□□□□□ -0.81
USP6-201ENST00000250066 RAB34Q9BZG1 259 aa10□□□□□ -0.81
USP6-201ENST00000250066 JADE2Q9NQC1 790 aa10□□□□□ -0.81
USP6-201ENST00000250066 TNIKQ9UKE5 1360 aa10□□□□□ -0.81
USP6-201ENST00000250066 TACC1O75410 805 aa10□□□□□ -0.81
USP6-201ENST00000250066 CCDC144CPQ8IYA2 1237 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 CCDC110Q8TBZ0 833 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 SUDS3Q9H7L9 328 aaPredicted RBP9.99□□□□□ -0.81
USP6-201ENST00000250066 YEATS4O95619 227 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 GNAI2P04899 355 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 NAA25Q14CX7 972 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 PPP4R3BQ5MIZ7 849 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 ST20-MTHFSA0A0A6YYL1 179 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 FKBP4Q02790 459 aaKnown RBP eCLIP9.99□□□□□ -0.81
USP6-201ENST00000250066 OTUD6BQ8N6M0 293 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 ANO10Q9NW15 660 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 SYCE3A1L190 88 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 CCDC63Q8NA47 563 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 TCHPQ9BT92 498 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 CAMK4Q16566 473 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 C16orf45Q96MC5 204 aaPredicted RBP9.99□□□□□ -0.81
USP6-201ENST00000250066 MPHOSPH8Q99549 860 aa9.99□□□□□ -0.81
USP6-201ENST00000250066 HMGB1P1B2RPK0 211 aaPredicted RBP9.98□□□□□ -0.81
USP6-201ENST00000250066 HMOX1P09601 288 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 CTNNA3Q9UI47 895 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 WDHD1O75717 1129 aaPredicted RBP9.98□□□□□ -0.81
USP6-201ENST00000250066 KIF5AQ12840 1032 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 FLIIQ13045 1269 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 IFI16Q16666 785 aaKnown RBP9.98□□□□□ -0.81
USP6-201ENST00000250066 ZNF287Q9HBT7 754 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 L3MBTL2Q969R5 705 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 SNX16P57768 344 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 TMX1Q9H3N1 280 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 TRMT1Q9NXH9 659 aaKnown RBP9.98□□□□□ -0.81
USP6-201ENST00000250066 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
USP6-201ENST00000250066 RAB3GAP2Q9H2M9 1393 aa9.98□□□□□ -0.81
USP6-201ENST00000250066 LRSAM1Q6UWE0 723 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 SEPT14Q6ZU15 432 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 ZNF354CQ86Y25 554 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 STMN4Q9H169 189 aaPredicted RBP9.97□□□□□ -0.81
USP6-201ENST00000250066 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 GOLGA6L9A6NEM1 432 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 ERCC3P19447 782 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 RSRC1Q96IZ7 334 aaKnown RBP9.97□□□□□ -0.81
USP6-201ENST00000250066 TTC14Q96N46 770 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 CLIP2Q9UDT6 1046 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 ARID4AP29374 1257 aaPredicted RBP9.97□□□□□ -0.81
USP6-201ENST00000250066 KRT32Q14532 448 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 ATRIPQ8WXE1 791 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 KIF20AO95235 890 aa9.97□□□□□ -0.81
USP6-201ENST00000250066 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
USP6-201ENST00000250066 PRPF31Q8WWY3 499 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms