RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 CEP63Q96MT8 703 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.3□□□□□ -0.92
GGCX-201ENST00000233838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.3□□□□□ -0.92
GGCX-201ENST00000233838 TNNT1P13805 278 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 UBE4AQ14139 1066 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 METTL24Q5JXM2 366 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 SHTN1A0MZ66 631 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 USP8P40818 1118 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 KRT32Q14532 448 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 MVPQ14764 893 aaKnown RBP9.29□□□□□ -0.92
GGCX-201ENST00000233838 RRS1Q15050 365 aaKnown RBP9.29□□□□□ -0.92
GGCX-201ENST00000233838 KLHL10Q6JEL2 608 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 CACNA2D4Q7Z3S7 1137 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.29□□□□□ -0.92
GGCX-201ENST00000233838 CEP126Q9P2H0 1117 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 MAP3K11Q16584 847 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 CABP1Q9NZU7 370 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 MAPK8IP2Q13387 824 aaPredicted RBP9.29□□□□□ -0.92
GGCX-201ENST00000233838 PSMD1Q99460 953 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 ANKRD50Q9ULJ7 1429 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 CRACR2AQ9BSW2 395 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
GGCX-201ENST00000233838 IFFO1Q0D2I5 559 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 PDE3AQ14432 1141 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 CCDC83Q8IWF9 413 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 FERMT2Q96AC1 680 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 MKNK2Q9HBH9 465 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 TOPBP1Q92547 1522 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 SYCE3A1L190 88 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 TICAM2Q86XR7 235 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 CC2D2AQ9P2K1 1620 aa9.29□□□□□ -0.92
GGCX-201ENST00000233838 BIVM-ERCC5R4GMW8 1640 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 HFM1A2PYH4 1435 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 ANKIB1Q9P2G1 1089 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 CCDC96Q2M329 555 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 LARP1Q6PKG0 1096 aaKnown RBP9.28□□□□□ -0.92
GGCX-201ENST00000233838 GSTTP1A0A1W2PQM5 241 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 TTLL12Q14166 644 aaPredicted RBP9.28□□□□□ -0.92
GGCX-201ENST00000233838 RTEL1-TNFRSF6BF6WH68 1400 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 MAP3K1Q13233 1512 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 CUL5Q93034 780 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 ATF7IPQ6VMQ6 1270 aa9.28□□□□□ -0.92
GGCX-201ENST00000233838 KIF5CO60282 957 aa9.27□□□□□ -0.92
GGCX-201ENST00000233838 CAVIN4Q5BKX8 364 aa9.27□□□□□ -0.92
GGCX-201ENST00000233838 ZNF287Q9HBT7 754 aa9.27□□□□□ -0.92
GGCX-201ENST00000233838 GCOM1H8Y6P7 765 aaPredicted RBP9.27□□□□□ -0.93
GGCX-201ENST00000233838 MYZAPP0CAP1 466 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 LUZP1Q86V48 1076 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 TMEM87AQ8NBN3 555 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 COMMD10Q9Y6G5 202 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 PEG3Q9GZU2 1588 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 PCF11O94913 1555 aaKnown RBP9.27□□□□□ -0.93
GGCX-201ENST00000233838 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
GGCX-201ENST00000233838 UBXN4Q92575 508 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 GUCY1B3Q02153 619 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 NUP88Q99567 741 aaPredicted RBP9.27□□□□□ -0.93
GGCX-201ENST00000233838 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 AQRO60306 1485 aaKnown RBP eCLIP9.27□□□□□ -0.933e-9■■■■■ 34.1
GGCX-201ENST00000233838 MACROD2A1Z1Q3 448 aa9.27□□□□□ -0.93
GGCX-201ENST00000233838 SMARCA5O60264 1052 aaPredicted RBP9.27□□□□□ -0.93
GGCX-201ENST00000233838 ZNF692Q9BU19 519 aaPredicted RBP9.27□□□□□ -0.93
GGCX-201ENST00000233838 ZPR1O75312 459 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 DZIP1Q86YF9 867 aaKnown RBP9.26□□□□□ -0.93
GGCX-201ENST00000233838 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 MAP9Q49MG5 647 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 WDR63Q8IWG1 891 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 PKNOX2Q96KN3 472 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 STARD3NLO95772 234 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 RNF187Q5TA31 235 aaPredicted RBP9.26□□□□□ -0.93
GGCX-201ENST00000233838 WDR78Q5VTH9 848 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 PRPF40BQ6NWY9 871 aaKnown RBP9.26□□□□□ -0.93
GGCX-201ENST00000233838 GBP3Q9H0R5 595 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 SLC12A5Q9H2X9 1139 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 MRC2Q9UBG0 1479 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 CTNNA2P26232 953 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 MYD88Q99836 296 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 ZSCAN12O43309 604 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
GGCX-201ENST00000233838 DRC1Q96MC2 740 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 AKAP2Q9Y2D5 859 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 VPS36Q86VN1 386 aa9.26□□□□□ -0.93
GGCX-201ENST00000233838 PTPN14Q15678 1187 aa9.25□□□□□ -0.93
GGCX-201ENST00000233838 RANBP6O60518 1105 aaKnown RBP9.25□□□□□ -0.93
GGCX-201ENST00000233838 TTC16Q8NEE8 873 aa9.25□□□□□ -0.93
GGCX-201ENST00000233838 POLA1P09884 1462 aaPredicted RBP9.25□□□□□ -0.93
GGCX-201ENST00000233838 TOP1P11387 765 aaKnown RBP9.25□□□□□ -0.93
GGCX-201ENST00000233838 TMEM266Q2M3C6 531 aa9.25□□□□□ -0.93
GGCX-201ENST00000233838 HOOK3Q86VS8 718 aa9.25□□□□□ -0.93
GGCX-201ENST00000233838 EHMT1Q9H9B1 1298 aa9.25□□□□□ -0.93
GGCX-201ENST00000233838 ZNF652Q9Y2D9 606 aa9.25□□□□□ -0.93
GGCX-201ENST00000233838 FGFR1OPO95684 399 aaKnown RBP9.25□□□□□ -0.93
GGCX-201ENST00000233838 ZNF444Q8N0Y2 327 aaPredicted RBP9.25□□□□□ -0.93
GGCX-201ENST00000233838 CPLX3Q8WVH0 158 aa9.25□□□□□ -0.93
GGCX-201ENST00000233838 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
GGCX-201ENST00000233838 IFT140Q96RY7 1462 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms