Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Limd2Q8BGB5 Zxda-201ENSMUST00000117281 2621 ntBASIC14.94□□□□□ -0.02
Limd2Q8BGB5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limd2Q8BGB5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Limd2Q8BGB5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limd2Q8BGB5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Limd2Q8BGB5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC14.86□□□□□ -0.03
Limd2Q8BGB5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Limd2Q8BGB5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Limd2Q8BGB5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Limd2Q8BGB5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Limd2Q8BGB5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Limd2Q8BGB5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Limd2Q8BGB5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Limd2Q8BGB5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Limd2Q8BGB5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Limd2Q8BGB5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Limd2Q8BGB5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Limd2Q8BGB5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Limd2Q8BGB5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Limd2Q8BGB5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Limd2Q8BGB5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Limd2Q8BGB5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Limd2Q8BGB5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Limd2Q8BGB5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limd2Q8BGB5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Limd2Q8BGB5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Limd2Q8BGB5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Limd2Q8BGB5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Limd2Q8BGB5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Limd2Q8BGB5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC14.69□□□□□ -0.06
Limd2Q8BGB5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limd2Q8BGB5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Limd2Q8BGB5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Limd2Q8BGB5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC14.68□□□□□ -0.06
Limd2Q8BGB5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Limd2Q8BGB5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limd2Q8BGB5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC14.68□□□□□ -0.06
Limd2Q8BGB5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limd2Q8BGB5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Limd2Q8BGB5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Limd2Q8BGB5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Limd2Q8BGB5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Limd2Q8BGB5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Limd2Q8BGB5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limd2Q8BGB5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limd2Q8BGB5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Limd2Q8BGB5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limd2Q8BGB5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC14.6□□□□□ -0.07
Limd2Q8BGB5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limd2Q8BGB5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limd2Q8BGB5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limd2Q8BGB5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limd2Q8BGB5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limd2Q8BGB5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limd2Q8BGB5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limd2Q8BGB5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limd2Q8BGB5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Limd2Q8BGB5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limd2Q8BGB5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limd2Q8BGB5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limd2Q8BGB5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Limd2Q8BGB5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limd2Q8BGB5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Limd2Q8BGB5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Limd2Q8BGB5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Limd2Q8BGB5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
Limd2Q8BGB5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Limd2Q8BGB5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Limd2Q8BGB5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC14.47□□□□□ -0.09
Limd2Q8BGB5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Limd2Q8BGB5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd2Q8BGB5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd2Q8BGB5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd2Q8BGB5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd2Q8BGB5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd2Q8BGB5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd2Q8BGB5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd2Q8BGB5 Gm15042-201ENSMUST00000120212 883 ntBASIC14.42□□□□□ -0.1
Limd2Q8BGB5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limd2Q8BGB5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limd2Q8BGB5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limd2Q8BGB5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Limd2Q8BGB5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limd2Q8BGB5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limd2Q8BGB5 Gm9905-201ENSMUST00000065740 1845 ntBASIC14.38□□□□□ -0.11
Limd2Q8BGB5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limd2Q8BGB5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Limd2Q8BGB5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Limd2Q8BGB5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Limd2Q8BGB5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limd2Q8BGB5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limd2Q8BGB5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Limd2Q8BGB5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limd2Q8BGB5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Limd2Q8BGB5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limd2Q8BGB5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC14.34□□□□□ -0.11
Limd2Q8BGB5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC14.34□□□□□ -0.11
Limd2Q8BGB5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limd2Q8BGB5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms