Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Gm10013-201ENSMUST00000106074 672 ntBASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf1aP25118 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Gm10052-201ENSMUST00000168019 960 ntBASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Gm7729-201ENSMUST00000050143 801 ntBASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Tnfrsf1aP25118 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Gm18032-201ENSMUST00000222541 538 ntBASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Gm9987-201ENSMUST00000069768 567 ntBASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfrsf1aP25118 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfrsf1aP25118 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms