Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 SNORD73B-201ENST00000364394 72 ntBASIC-3.65□□□□□ -2.99
CSPG4Q6UVK1 RNU6-892P-201ENST00000410335 99 ntBASIC-3.66□□□□□ -2.99
CSPG4Q6UVK1 RNU6-1011P-201ENST00000384668 107 ntBASIC-3.69□□□□□ -3
CSPG4Q6UVK1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.69□□□□□ -3
CSPG4Q6UVK1 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.71□□□□□ -3
CSPG4Q6UVK1 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.72□□□□□ -3.01
CSPG4Q6UVK1 MIR1302-4-201ENST00000408701 150 ntBASIC-3.76□□□□□ -3.01
CSPG4Q6UVK1 AP001094.1-201ENST00000579805 193 ntBASIC-3.87□□□□□ -3.03
CSPG4Q6UVK1 MTND4LP19-201ENST00000403051 166 ntBASIC-3.88□□□□□ -3.03
CSPG4Q6UVK1 RNU6-724P-201ENST00000390958 105 ntBASIC-3.89□□□□□ -3.03
CSPG4Q6UVK1 MIR4719-201ENST00000585233 84 ntBASIC-3.94□□□□□ -3.04
CSPG4Q6UVK1 MIR548T-201ENST00000408369 74 ntBASIC-3.98□□□□□ -3.05
CSPG4Q6UVK1 RNA5SP170-201ENST00000517150 101 ntBASIC-3.98□□□□□ -3.05
CSPG4Q6UVK1 MT-TR-201ENST00000387439 65 ntBASIC-4.04□□□□□ -3.06
CSPG4Q6UVK1 MIR3668-201ENST00000582138 75 ntBASIC-4.1□□□□□ -3.07
CSPG4Q6UVK1 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.12□□□□□ -3.07
CSPG4Q6UVK1 AC099654.10-201ENST00000640395 161 ntBASIC-4.14□□□□□ -3.07
CSPG4Q6UVK1 snosnR66.1-201ENST00000391095 99 ntBASIC-4.24□□□□□ -3.09
CSPG4Q6UVK1 RNU4-37P-201ENST00000410214 84 ntBASIC-4.31□□□□□ -3.1
CSPG4Q6UVK1 U2.22-201ENST00000636441 106 ntBASIC-4.38□□□□□ -3.11
CSPG4Q6UVK1 AL603908.1-201ENST00000406098 201 ntBASIC-4.39□□□□□ -3.11
CSPG4Q6UVK1 RNU6-638P-201ENST00000516582 104 ntBASIC-4.4□□□□□ -3.11
CSPG4Q6UVK1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-4.5□□□□□ -3.13
CSPG4Q6UVK1 SNORA72.7-201ENST00000516349 94 ntBASIC-4.58□□□□□ -3.14
Retrieved 24 of 98,524 protein–RNA pairs in 2.4 ms