Protein–RNA interactions for Protein: Q68DE3

USF3, Basic helix-loop-helix domain-containing protein USF3, humanhuman

Predictions only

Length 2,245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF3Q68DE3 AL606753.1-201ENST00000427435 87 ntBASIC-4.33□□□□□ -3.1
USF3Q68DE3 RNY4P29-201ENST00000410801 97 ntBASIC-4.35□□□□□ -3.11
USF3Q68DE3 SNORD73B-201ENST00000364394 72 ntBASIC-4.4□□□□□ -3.11
USF3Q68DE3 MIR548T-201ENST00000408369 74 ntBASIC-4.44□□□□□ -3.12
USF3Q68DE3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.48□□□□□ -3.13
USF3Q68DE3 RNU6-724P-201ENST00000390958 105 ntBASIC-4.49□□□□□ -3.13
USF3Q68DE3 AP001094.1-201ENST00000579805 193 ntBASIC-4.49□□□□□ -3.13
USF3Q68DE3 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.52□□□□□ -3.13
USF3Q68DE3 MIR1302-4-201ENST00000408701 150 ntBASIC-4.55□□□□□ -3.14
USF3Q68DE3 RNU6-1298P-201ENST00000362456 101 ntBASIC-4.56□□□□□ -3.14
USF3Q68DE3 MIR4719-201ENST00000585233 84 ntBASIC-4.62□□□□□ -3.15
USF3Q68DE3 MTND4LP19-201ENST00000403051 166 ntBASIC-4.69□□□□□ -3.16
USF3Q68DE3 RNA5SP170-201ENST00000517150 101 ntBASIC-4.72□□□□□ -3.17
USF3Q68DE3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.76□□□□□ -3.17
USF3Q68DE3 MIR3668-201ENST00000582138 75 ntBASIC-4.78□□□□□ -3.18
USF3Q68DE3 MT-TR-201ENST00000387439 65 ntBASIC-4.81□□□□□ -3.18
USF3Q68DE3 AC099654.10-201ENST00000640395 161 ntBASIC-4.82□□□□□ -3.18
USF3Q68DE3 snosnR66.1-201ENST00000391095 99 ntBASIC-4.97□□□□□ -3.21
USF3Q68DE3 AL603908.1-201ENST00000406098 201 ntBASIC-5.15□□□□□ -3.23
USF3Q68DE3 RNU4-37P-201ENST00000410214 84 ntBASIC-5.16□□□□□ -3.24
USF3Q68DE3 U2.22-201ENST00000636441 106 ntBASIC-5.21□□□□□ -3.24
USF3Q68DE3 RNU6-638P-201ENST00000516582 104 ntBASIC-5.28□□□□□ -3.26
USF3Q68DE3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-5.42□□□□□ -3.28
USF3Q68DE3 SNORA72.7-201ENST00000516349 94 ntBASIC-5.5□□□□□ -3.29
Retrieved 24 of 98,524 protein–RNA pairs in 220.1 ms