Protein–RNA interactions for Protein: Q9H2Z4

NKX2-4, Homeobox protein Nkx-2.4, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4Q9H2Z4 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.77□□□□□ -2.53
NKX2-4Q9H2Z4 MIR548F3-201ENST00000408509 87 ntBASIC-0.77□□□□□ -2.53
NKX2-4Q9H2Z4 AC097484.2-201ENST00000509147 251 ntBASIC-0.77□□□□□ -2.53
NKX2-4Q9H2Z4 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.78□□□□□ -2.53
NKX2-4Q9H2Z4 MIR379-201ENST00000362218 67 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-986P-201ENST00000363133 102 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 SNORD114-3-201ENST00000364969 75 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-614P-201ENST00000384369 107 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 U6.59-201ENST00000615686 107 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 FTX_4.1-201ENST00000616291 147 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.79□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-854P-201ENST00000364036 107 ntBASIC-0.8□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.8□□□□□ -2.54
NKX2-4Q9H2Z4 MIR5693-201ENST00000577722 73 ntBASIC-0.8□□□□□ -2.54
NKX2-4Q9H2Z4 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.8□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.81□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.81□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.81□□□□□ -2.54
NKX2-4Q9H2Z4 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.81□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-230P-201ENST00000362457 104 ntBASIC-0.82□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.82□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.83□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.83□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-930P-201ENST00000390938 100 ntBASIC-0.83□□□□□ -2.54
NKX2-4Q9H2Z4 MTND4LP19-201ENST00000403051 166 ntBASIC-0.83□□□□□ -2.54
NKX2-4Q9H2Z4 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.84□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-808P-201ENST00000391233 108 ntBASIC-0.84□□□□□ -2.54
NKX2-4Q9H2Z4 MIR1254-1-201ENST00000408257 97 ntBASIC-0.84□□□□□ -2.54
NKX2-4Q9H2Z4 AL731768.1-201ENST00000603124 139 ntBASIC-0.84□□□□□ -2.54
NKX2-4Q9H2Z4 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.85□□□□□ -2.55
NKX2-4Q9H2Z4 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.85□□□□□ -2.55
NKX2-4Q9H2Z4 RNU6-59P-201ENST00000384787 107 ntBASIC-0.85□□□□□ -2.55
NKX2-4Q9H2Z4 MIR124-1-201ENST00000385275 85 ntBASIC-0.85□□□□□ -2.55
NKX2-4Q9H2Z4 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.85□□□□□ -2.55
NKX2-4Q9H2Z4 SNORD54-201ENST00000459159 67 ntBASIC-0.85□□□□□ -2.55
NKX2-4Q9H2Z4 MIR4317-201ENST00000637586 65 ntBASIC-0.85□□□□□ -2.55
NKX2-4Q9H2Z4 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.86□□□□□ -2.55
NKX2-4Q9H2Z4 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.86□□□□□ -2.55
NKX2-4Q9H2Z4 MIR548AH-201ENST00000637109 76 ntBASIC-0.86□□□□□ -2.55
NKX2-4Q9H2Z4 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.87□□□□□ -2.55
NKX2-4Q9H2Z4 RNU6-119P-201ENST00000364882 107 ntBASIC-0.87□□□□□ -2.55
NKX2-4Q9H2Z4 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.87□□□□□ -2.55
NKX2-4Q9H2Z4 SNORD115-45-201ENST00000391078 81 ntBASIC-0.87□□□□□ -2.55
NKX2-4Q9H2Z4 MIR545-201ENST00000385085 106 ntBASIC-0.88□□□□□ -2.55
NKX2-4Q9H2Z4 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.89□□□□□ -2.55
NKX2-4Q9H2Z4 SNORD114-13-201ENST00000364377 74 ntBASIC-0.89□□□□□ -2.55
NKX2-4Q9H2Z4 RNA5SP224-201ENST00000365069 126 ntBASIC-0.89□□□□□ -2.55
NKX2-4Q9H2Z4 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.9□□□□□ -2.55
NKX2-4Q9H2Z4 RNY4P9-201ENST00000363194 97 ntBASIC-0.91□□□□□ -2.56
NKX2-4Q9H2Z4 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.92□□□□□ -2.56
NKX2-4Q9H2Z4 RNU6-822P-201ENST00000362707 106 ntBASIC-0.92□□□□□ -2.56
NKX2-4Q9H2Z4 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.92□□□□□ -2.56
NKX2-4Q9H2Z4 RNU4-37P-201ENST00000410214 84 ntBASIC-0.92□□□□□ -2.56
NKX2-4Q9H2Z4 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.92□□□□□ -2.56
NKX2-4Q9H2Z4 RNU6-345P-201ENST00000517001 107 ntBASIC-0.92□□□□□ -2.56
NKX2-4Q9H2Z4 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.93□□□□□ -2.56
NKX2-4Q9H2Z4 RNU6-803P-201ENST00000516034 102 ntBASIC-0.93□□□□□ -2.56
NKX2-4Q9H2Z4 RNU6-987P-201ENST00000384759 104 ntBASIC-0.94□□□□□ -2.56
NKX2-4Q9H2Z4 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.94□□□□□ -2.56
NKX2-4Q9H2Z4 RNY4-201ENST00000516507 96 ntBASIC-0.94□□□□□ -2.56
NKX2-4Q9H2Z4 AL359920.1-201ENST00000618332 176 ntBASIC-0.94□□□□□ -2.56
NKX2-4Q9H2Z4 RNU6-836P-201ENST00000362920 107 ntBASIC-0.95□□□□□ -2.56
NKX2-4Q9H2Z4 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.95□□□□□ -2.56
NKX2-4Q9H2Z4 RNY4P25-201ENST00000459254 96 ntBASIC-0.95□□□□□ -2.56
NKX2-4Q9H2Z4 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.96□□□□□ -2.56
NKX2-4Q9H2Z4 RNA5SP106-201ENST00000517274 100 ntBASIC-0.96□□□□□ -2.56
NKX2-4Q9H2Z4 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.97□□□□□ -2.56
NKX2-4Q9H2Z4 RNU6-737P-201ENST00000365370 107 ntBASIC-0.97□□□□□ -2.56
NKX2-4Q9H2Z4 RNY4P7-201ENST00000364600 96 ntBASIC-0.98□□□□□ -2.57
NKX2-4Q9H2Z4 SNORD45C-201ENST00000383893 79 ntBASIC-0.98□□□□□ -2.57
NKX2-4Q9H2Z4 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.98□□□□□ -2.57
NKX2-4Q9H2Z4 MIR656-201ENST00000385224 78 ntBASIC-0.98□□□□□ -2.57
NKX2-4Q9H2Z4 SNORD115.2-201ENST00000391126 59 ntBASIC-0.98□□□□□ -2.57
NKX2-4Q9H2Z4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1□□□□□ -2.57
NKX2-4Q9H2Z4 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.01□□□□□ -2.57
NKX2-4Q9H2Z4 RNY4P10-201ENST00000365571 96 ntBASIC-1.02□□□□□ -2.57
NKX2-4Q9H2Z4 RNU6-665P-201ENST00000384639 107 ntBASIC-1.02□□□□□ -2.57
NKX2-4Q9H2Z4 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.02□□□□□ -2.57
NKX2-4Q9H2Z4 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.02□□□□□ -2.57
NKX2-4Q9H2Z4 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.03□□□□□ -2.57
NKX2-4Q9H2Z4 MIR509-1-201ENST00000385265 94 ntBASIC-1.04□□□□□ -2.58
NKX2-4Q9H2Z4 MIR509-2-201ENST00000390724 91 ntBASIC-1.04□□□□□ -2.58
NKX2-4Q9H2Z4 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.05□□□□□ -2.58
NKX2-4Q9H2Z4 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.06□□□□□ -2.58
NKX2-4Q9H2Z4 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.06□□□□□ -2.58
NKX2-4Q9H2Z4 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.07□□□□□ -2.58
NKX2-4Q9H2Z4 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.07□□□□□ -2.58
NKX2-4Q9H2Z4 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.08□□□□□ -2.58
NKX2-4Q9H2Z4 RNA5SP449-201ENST00000516871 130 ntBASIC-1.08□□□□□ -2.58
NKX2-4Q9H2Z4 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.09□□□□□ -2.58
NKX2-4Q9H2Z4 SNORD111B-201ENST00000408587 80 ntBASIC-1.1□□□□□ -2.59
NKX2-4Q9H2Z4 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.11□□□□□ -2.59
NKX2-4Q9H2Z4 U6.103-201ENST00000637085 61 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms