Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.03□□□□□ -2.89
TRIM40Q6P9F5 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.04□□□□□ -2.9
TRIM40Q6P9F5 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.04□□□□□ -2.9
TRIM40Q6P9F5 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.05□□□□□ -2.9
TRIM40Q6P9F5 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.05□□□□□ -2.9
TRIM40Q6P9F5 RNA5SP225-201ENST00000410874 135 ntBASIC-3.06□□□□□ -2.9
TRIM40Q6P9F5 AL731768.1-201ENST00000603124 139 ntBASIC-3.06□□□□□ -2.9
TRIM40Q6P9F5 MIR548X-201ENST00000580069 75 ntBASIC-3.07□□□□□ -2.9
TRIM40Q6P9F5 MIR4662A-201ENST00000637499 67 ntBASIC-3.1□□□□□ -2.91
TRIM40Q6P9F5 RNU6-776P-201ENST00000364403 104 ntBASIC-3.11□□□□□ -2.91
TRIM40Q6P9F5 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.11□□□□□ -2.91
TRIM40Q6P9F5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.11□□□□□ -2.91
TRIM40Q6P9F5 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.12□□□□□ -2.91
TRIM40Q6P9F5 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.13□□□□□ -2.91
TRIM40Q6P9F5 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.13□□□□□ -2.91
TRIM40Q6P9F5 RNU6-471P-201ENST00000383944 106 ntBASIC-3.13□□□□□ -2.91
TRIM40Q6P9F5 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.13□□□□□ -2.91
TRIM40Q6P9F5 MIR1254-1-201ENST00000408257 97 ntBASIC-3.14□□□□□ -2.91
TRIM40Q6P9F5 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.15□□□□□ -2.91
TRIM40Q6P9F5 RNU6-345P-201ENST00000517001 107 ntBASIC-3.15□□□□□ -2.91
TRIM40Q6P9F5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.15□□□□□ -2.91
TRIM40Q6P9F5 RNU6-822P-201ENST00000362707 106 ntBASIC-3.18□□□□□ -2.92
TRIM40Q6P9F5 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.18□□□□□ -2.92
TRIM40Q6P9F5 RNU6-987P-201ENST00000384759 104 ntBASIC-3.18□□□□□ -2.92
TRIM40Q6P9F5 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.19□□□□□ -2.92
TRIM40Q6P9F5 MIR509-1-201ENST00000385265 94 ntBASIC-3.19□□□□□ -2.92
TRIM40Q6P9F5 MIR509-2-201ENST00000390724 91 ntBASIC-3.19□□□□□ -2.92
TRIM40Q6P9F5 MIR1302-4-201ENST00000408701 150 ntBASIC-3.19□□□□□ -2.92
TRIM40Q6P9F5 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.21□□□□□ -2.92
TRIM40Q6P9F5 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.21□□□□□ -2.92
TRIM40Q6P9F5 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.22□□□□□ -2.92
TRIM40Q6P9F5 SNORD114-13-201ENST00000364377 74 ntBASIC-3.22□□□□□ -2.92
TRIM40Q6P9F5 RNU6-446P-201ENST00000362827 106 ntBASIC-3.24□□□□□ -2.93
TRIM40Q6P9F5 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.24□□□□□ -2.93
TRIM40Q6P9F5 RNA5SP106-201ENST00000517274 100 ntBASIC-3.24□□□□□ -2.93
TRIM40Q6P9F5 AC114801.3-201ENST00000510231 177 ntBASIC-3.25□□□□□ -2.93
TRIM40Q6P9F5 AL359920.1-201ENST00000618332 176 ntBASIC-3.25□□□□□ -2.93
TRIM40Q6P9F5 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.26□□□□□ -2.93
TRIM40Q6P9F5 MIR4317-201ENST00000637586 65 ntBASIC-3.26□□□□□ -2.93
TRIM40Q6P9F5 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.28□□□□□ -2.93
TRIM40Q6P9F5 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.3□□□□□ -2.94
TRIM40Q6P9F5 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.3□□□□□ -2.94
TRIM40Q6P9F5 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.32□□□□□ -2.94
TRIM40Q6P9F5 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.32□□□□□ -2.94
TRIM40Q6P9F5 RNY4P10-201ENST00000365571 96 ntBASIC-3.33□□□□□ -2.94
TRIM40Q6P9F5 AC139453.2-201ENST00000487255 133 ntBASIC-3.35□□□□□ -2.95
TRIM40Q6P9F5 RNU4-33P-201ENST00000364316 85 ntBASIC-3.37□□□□□ -2.95
TRIM40Q6P9F5 SNORD113-4-201ENST00000364802 75 ntBASIC-3.39□□□□□ -2.95
TRIM40Q6P9F5 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.39□□□□□ -2.95
TRIM40Q6P9F5 MIR548AL-201ENST00000578416 97 ntBASIC-3.39□□□□□ -2.95
TRIM40Q6P9F5 MIR548H4-201ENST00000408689 111 ntBASIC-3.43□□□□□ -2.96
TRIM40Q6P9F5 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.44□□□□□ -2.96
TRIM40Q6P9F5 RNU6-829P-201ENST00000363700 112 ntBASIC-3.45□□□□□ -2.96
TRIM40Q6P9F5 MIR633-201ENST00000384821 98 ntBASIC-3.46□□□□□ -2.96
TRIM40Q6P9F5 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.47□□□□□ -2.96
TRIM40Q6P9F5 RNA5SP224-201ENST00000365069 126 ntBASIC-3.48□□□□□ -2.97
TRIM40Q6P9F5 RNU6-737P-201ENST00000365370 107 ntBASIC-3.48□□□□□ -2.97
TRIM40Q6P9F5 MIR656-201ENST00000385224 78 ntBASIC-3.5□□□□□ -2.97
TRIM40Q6P9F5 SNORD115.2-201ENST00000391126 59 ntBASIC-3.5□□□□□ -2.97
TRIM40Q6P9F5 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.51□□□□□ -2.97
TRIM40Q6P9F5 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.52□□□□□ -2.97
TRIM40Q6P9F5 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.53□□□□□ -2.97
TRIM40Q6P9F5 RNU6-836P-201ENST00000362920 107 ntBASIC-3.54□□□□□ -2.98
TRIM40Q6P9F5 SNORD115-45-201ENST00000391078 81 ntBASIC-3.54□□□□□ -2.98
TRIM40Q6P9F5 SNORD45C-201ENST00000383893 79 ntBASIC-3.55□□□□□ -2.98
TRIM40Q6P9F5 RNU6-808P-201ENST00000391233 108 ntBASIC-3.59□□□□□ -2.98
TRIM40Q6P9F5 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.59□□□□□ -2.98
TRIM40Q6P9F5 RNU6-854P-201ENST00000364036 107 ntBASIC-3.6□□□□□ -2.99
TRIM40Q6P9F5 AC125388.1-201ENST00000459631 156 ntBASIC-3.6□□□□□ -2.99
TRIM40Q6P9F5 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.61□□□□□ -2.99
TRIM40Q6P9F5 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.61□□□□□ -2.99
TRIM40Q6P9F5 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.62□□□□□ -2.99
TRIM40Q6P9F5 AC079150.2-201ENST00000443733 78 ntBASIC-3.62□□□□□ -2.99
TRIM40Q6P9F5 RNU6-838P-201ENST00000363399 108 ntBASIC-3.64□□□□□ -2.99
TRIM40Q6P9F5 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.64□□□□□ -2.99
TRIM40Q6P9F5 RNU6-665P-201ENST00000384639 107 ntBASIC-3.64□□□□□ -2.99
TRIM40Q6P9F5 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.65□□□□□ -2.99
TRIM40Q6P9F5 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.68□□□□□ -3
TRIM40Q6P9F5 MIR124-1-201ENST00000385275 85 ntBASIC-3.68□□□□□ -3
TRIM40Q6P9F5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.68□□□□□ -3
TRIM40Q6P9F5 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.69□□□□□ -3
TRIM40Q6P9F5 MIR548AH-201ENST00000637109 76 ntBASIC-3.71□□□□□ -3
TRIM40Q6P9F5 RNU6-499P-201ENST00000365615 107 ntBASIC-3.79□□□□□ -3.02
TRIM40Q6P9F5 RNU6-753P-201ENST00000363926 107 ntBASIC-3.83□□□□□ -3.02
TRIM40Q6P9F5 RNU6-638P-201ENST00000516582 104 ntBASIC-3.83□□□□□ -3.02
TRIM40Q6P9F5 RNU6-59P-201ENST00000384787 107 ntBASIC-3.84□□□□□ -3.02
TRIM40Q6P9F5 RNU6-986P-201ENST00000363133 102 ntBASIC-3.88□□□□□ -3.03
TRIM40Q6P9F5 RNU6-936P-201ENST00000384005 107 ntBASIC-3.88□□□□□ -3.03
TRIM40Q6P9F5 SNORA72.7-201ENST00000516349 94 ntBASIC-3.9□□□□□ -3.03
TRIM40Q6P9F5 RNU6-930P-201ENST00000390938 100 ntBASIC-3.93□□□□□ -3.04
TRIM40Q6P9F5 RNU6-788P-201ENST00000390967 104 ntBASIC-3.93□□□□□ -3.04
TRIM40Q6P9F5 MIR545-201ENST00000385085 106 ntBASIC-3.95□□□□□ -3.04
TRIM40Q6P9F5 MIR548F3-201ENST00000408509 87 ntBASIC-3.98□□□□□ -3.05
TRIM40Q6P9F5 RNU6-422P-201ENST00000384632 107 ntBASIC-4.02□□□□□ -3.05
TRIM40Q6P9F5 RNU6-614P-201ENST00000384369 107 ntBASIC-4.06□□□□□ -3.06
TRIM40Q6P9F5 U6.59-201ENST00000615686 107 ntBASIC-4.06□□□□□ -3.06
TRIM40Q6P9F5 RNY4P13-201ENST00000384284 96 ntBASIC-4.08□□□□□ -3.06
TRIM40Q6P9F5 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.09□□□□□ -3.06
TRIM40Q6P9F5 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.12□□□□□ -3.07
TRIM40Q6P9F5 RNU4-85P-201ENST00000364675 123 ntBASIC-4.16□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 382 ms