Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 MIR4317-201ENST00000637586 65 ntBASIC-1.75□□□□□ -2.69
PTPN9P43378 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.78□□□□□ -2.69
PTPN9P43378 RNU6-194P-201ENST00000363862 105 ntBASIC-1.8□□□□□ -2.7
PTPN9P43378 RNU6-753P-201ENST00000363926 107 ntBASIC-1.8□□□□□ -2.7
PTPN9P43378 FTX_4.1-201ENST00000616291 147 ntBASIC-1.8□□□□□ -2.7
PTPN9P43378 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.81□□□□□ -2.7
PTPN9P43378 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.82□□□□□ -2.7
PTPN9P43378 SNORD115.2-201ENST00000391126 59 ntBASIC-1.82□□□□□ -2.7
PTPN9P43378 RNA5SP405-201ENST00000363059 114 ntBASIC-1.83□□□□□ -2.7
PTPN9P43378 RNU6-986P-201ENST00000363133 102 ntBASIC-1.83□□□□□ -2.7
PTPN9P43378 RNU6-822P-201ENST00000362707 106 ntBASIC-1.84□□□□□ -2.7
PTPN9P43378 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.84□□□□□ -2.7
PTPN9P43378 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.84□□□□□ -2.7
PTPN9P43378 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.84□□□□□ -2.7
PTPN9P43378 RNU6-838P-201ENST00000363399 108 ntBASIC-1.85□□□□□ -2.71
PTPN9P43378 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.85□□□□□ -2.71
PTPN9P43378 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
PTPN9P43378 RNU6-614P-201ENST00000384369 107 ntBASIC-1.87□□□□□ -2.71
PTPN9P43378 RNU6-788P-201ENST00000390967 104 ntBASIC-1.87□□□□□ -2.71
PTPN9P43378 RNU6-808P-201ENST00000391233 108 ntBASIC-1.87□□□□□ -2.71
PTPN9P43378 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.87□□□□□ -2.71
PTPN9P43378 U6.59-201ENST00000615686 107 ntBASIC-1.87□□□□□ -2.71
PTPN9P43378 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.88□□□□□ -2.71
PTPN9P43378 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.88□□□□□ -2.71
PTPN9P43378 RNU6-141P-201ENST00000410499 105 ntBASIC-1.88□□□□□ -2.71
PTPN9P43378 RNU6-345P-201ENST00000517001 107 ntBASIC-1.88□□□□□ -2.71
PTPN9P43378 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.89□□□□□ -2.71
PTPN9P43378 MIR4748-201ENST00000578076 82 ntBASIC-1.89□□□□□ -2.71
PTPN9P43378 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.94□□□□□ -2.72
PTPN9P43378 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.94□□□□□ -2.72
PTPN9P43378 RNU6-930P-201ENST00000390938 100 ntBASIC-1.94□□□□□ -2.72
PTPN9P43378 SNORD54-201ENST00000459159 67 ntBASIC-1.94□□□□□ -2.72
PTPN9P43378 RNA5SP224-201ENST00000365069 126 ntBASIC-1.95□□□□□ -2.72
PTPN9P43378 MIR548F3-201ENST00000408509 87 ntBASIC-1.96□□□□□ -2.72
PTPN9P43378 RNU6-836P-201ENST00000362920 107 ntBASIC-1.97□□□□□ -2.72
PTPN9P43378 RNY4P7-201ENST00000364600 96 ntBASIC-1.97□□□□□ -2.72
PTPN9P43378 MIR3139-201ENST00000579145 76 ntBASIC-1.97□□□□□ -2.72
PTPN9P43378 RNA5SP93-201ENST00000362525 114 ntBASIC-1.98□□□□□ -2.73
PTPN9P43378 RNY4P9-201ENST00000363194 97 ntBASIC-1.98□□□□□ -2.73
PTPN9P43378 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.98□□□□□ -2.73
PTPN9P43378 SNORD45C-201ENST00000383893 79 ntBASIC-1.98□□□□□ -2.73
PTPN9P43378 MTND4LP19-201ENST00000403051 166 ntBASIC-1.98□□□□□ -2.73
PTPN9P43378 MIR545-201ENST00000385085 106 ntBASIC-2□□□□□ -2.73
PTPN9P43378 RNU6-59P-201ENST00000384787 107 ntBASIC-2.01□□□□□ -2.73
PTPN9P43378 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.03□□□□□ -2.73
PTPN9P43378 MIR656-201ENST00000385224 78 ntBASIC-2.04□□□□□ -2.74
PTPN9P43378 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.04□□□□□ -2.74
PTPN9P43378 MT-TM-201ENST00000387377 68 ntBASIC-2.05□□□□□ -2.74
PTPN9P43378 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.06□□□□□ -2.74
PTPN9P43378 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.06□□□□□ -2.74
PTPN9P43378 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.07□□□□□ -2.74
PTPN9P43378 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.08□□□□□ -2.74
PTPN9P43378 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.09□□□□□ -2.74
PTPN9P43378 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.1□□□□□ -2.75
PTPN9P43378 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.1□□□□□ -2.75
PTPN9P43378 RNU6-737P-201ENST00000365370 107 ntBASIC-2.1□□□□□ -2.75
PTPN9P43378 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.1□□□□□ -2.75
PTPN9P43378 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.1□□□□□ -2.75
PTPN9P43378 RNU6-854P-201ENST00000364036 107 ntBASIC-2.12□□□□□ -2.75
PTPN9P43378 AL731768.1-201ENST00000603124 139 ntBASIC-2.12□□□□□ -2.75
PTPN9P43378 RNY4-201ENST00000516507 96 ntBASIC-2.16□□□□□ -2.76
PTPN9P43378 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.24□□□□□ -2.77
PTPN9P43378 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.25□□□□□ -2.77
PTPN9P43378 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.26□□□□□ -2.77
PTPN9P43378 RNU6-230P-201ENST00000362457 104 ntBASIC-2.26□□□□□ -2.77
PTPN9P43378 RNY4P25-201ENST00000459254 96 ntBASIC-2.26□□□□□ -2.77
PTPN9P43378 MIR5693-201ENST00000577722 73 ntBASIC-2.26□□□□□ -2.77
PTPN9P43378 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.27□□□□□ -2.77
PTPN9P43378 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.28□□□□□ -2.77
PTPN9P43378 MIR124-1-201ENST00000385275 85 ntBASIC-2.29□□□□□ -2.78
PTPN9P43378 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.31□□□□□ -2.78
PTPN9P43378 RNU4-37P-201ENST00000410214 84 ntBASIC-2.31□□□□□ -2.78
PTPN9P43378 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.31□□□□□ -2.78
PTPN9P43378 RNU6-987P-201ENST00000384759 104 ntBASIC-2.32□□□□□ -2.78
PTPN9P43378 RNU6-422P-201ENST00000384632 107 ntBASIC-2.33□□□□□ -2.78
PTPN9P43378 SNORD115-45-201ENST00000391078 81 ntBASIC-2.33□□□□□ -2.78
PTPN9P43378 AL359920.1-201ENST00000618332 176 ntBASIC-2.33□□□□□ -2.78
PTPN9P43378 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.34□□□□□ -2.78
PTPN9P43378 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.35□□□□□ -2.79
PTPN9P43378 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.36□□□□□ -2.79
PTPN9P43378 SNORD111B-201ENST00000408587 80 ntBASIC-2.36□□□□□ -2.79
PTPN9P43378 MIR548AH-201ENST00000637109 76 ntBASIC-2.37□□□□□ -2.79
PTPN9P43378 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.38□□□□□ -2.79
PTPN9P43378 U6.103-201ENST00000637085 61 ntBASIC-2.41□□□□□ -2.8
PTPN9P43378 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.43□□□□□ -2.8
PTPN9P43378 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.44□□□□□ -2.8
PTPN9P43378 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.46□□□□□ -2.8
PTPN9P43378 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.46□□□□□ -2.8
PTPN9P43378 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.5□□□□□ -2.81
PTPN9P43378 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.52□□□□□ -2.81
PTPN9P43378 RNU6-485P-201ENST00000363475 107 ntBASIC-2.53□□□□□ -2.81
PTPN9P43378 SNORD114-13-201ENST00000364377 74 ntBASIC-2.56□□□□□ -2.82
PTPN9P43378 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.56□□□□□ -2.82
PTPN9P43378 RNU6-724P-201ENST00000390958 105 ntBASIC-2.57□□□□□ -2.82
PTPN9P43378 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.59□□□□□ -2.82
PTPN9P43378 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.6□□□□□ -2.83
PTPN9P43378 RNU6-803P-201ENST00000516034 102 ntBASIC-2.61□□□□□ -2.83
PTPN9P43378 RNU6-1091P-201ENST00000363945 107 ntBASIC-2.66□□□□□ -2.84
PTPN9P43378 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.69□□□□□ -2.84
PTPN9P43378 RNU6-620P-201ENST00000384017 96 ntBASIC-2.74□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms