Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNU6-539P-201ENST00000516665 103 ntBASIC-2.77□□□□□ -2.85
COL18A1P39060 RNU6-742P-201ENST00000365289 107 ntBASIC-2.79□□□□□ -2.86
COL18A1P39060 MIR1254-1-201ENST00000408257 97 ntBASIC-2.79□□□□□ -2.86
COL18A1P39060 RNU6-153P-201ENST00000364422 104 ntBASIC-2.8□□□□□ -2.86
COL18A1P39060 U6.111-201ENST00000636093 83 ntBASIC-2.82□□□□□ -2.86
COL18A1P39060 RNU6-822P-201ENST00000362707 106 ntBASIC-2.82□□□□□ -2.86
COL18A1P39060 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.82□□□□□ -2.86
COL18A1P39060 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.82□□□□□ -2.86
COL18A1P39060 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.83□□□□□ -2.86
COL18A1P39060 MIR548X-201ENST00000580069 75 ntBASIC-2.84□□□□□ -2.86
COL18A1P39060 MIR3202-2-201ENST00000635980 79 ntBASIC-2.85□□□□□ -2.87
COL18A1P39060 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.86□□□□□ -2.87
COL18A1P39060 MIR5582-201ENST00000579697 68 ntBASIC-2.87□□□□□ -2.87
COL18A1P39060 AC062037.1-201ENST00000605302 128 ntBASIC-2.87□□□□□ -2.87
COL18A1P39060 AC110620.1-201ENST00000416042 228 ntBASIC-2.88□□□□□ -2.87
COL18A1P39060 RNU6-406P-201ENST00000516470 107 ntBASIC-2.88□□□□□ -2.87
COL18A1P39060 MIR4317-201ENST00000637586 65 ntBASIC-2.89□□□□□ -2.87
COL18A1P39060 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.9□□□□□ -2.87
COL18A1P39060 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.9□□□□□ -2.87
COL18A1P39060 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.92□□□□□ -2.88
COL18A1P39060 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.94□□□□□ -2.88
COL18A1P39060 MIR1255A-201ENST00000408338 113 ntBASIC-2.94□□□□□ -2.88
COL18A1P39060 RNU6-857P-201ENST00000515893 110 ntBASIC-2.94□□□□□ -2.88
COL18A1P39060 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.95□□□□□ -2.88
COL18A1P39060 RNU6-279P-201ENST00000391297 101 ntBASIC-2.96□□□□□ -2.88
COL18A1P39060 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.97□□□□□ -2.88
COL18A1P39060 AL603908.1-201ENST00000406098 201 ntBASIC-2.98□□□□□ -2.89
COL18A1P39060 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.99□□□□□ -2.89
COL18A1P39060 RNU6-737P-201ENST00000365370 107 ntBASIC-3□□□□□ -2.89
COL18A1P39060 Y_RNA.137-201ENST00000363455 112 ntBASIC-3□□□□□ -2.89
COL18A1P39060 RNU6-573P-201ENST00000383938 106 ntBASIC-3.01□□□□□ -2.89
COL18A1P39060 RNU6-471P-201ENST00000383944 106 ntBASIC-3.03□□□□□ -2.89
COL18A1P39060 AC139453.2-201ENST00000487255 133 ntBASIC-3.03□□□□□ -2.89
COL18A1P39060 SNORD115-45-201ENST00000391078 81 ntBASIC-3.04□□□□□ -2.9
COL18A1P39060 MIR4662A-201ENST00000637499 67 ntBASIC-3.04□□□□□ -2.9
COL18A1P39060 MIR363-201ENST00000384840 75 ntBASIC-3.05□□□□□ -2.9
COL18A1P39060 SNORD73B-201ENST00000364394 72 ntBASIC-3.06□□□□□ -2.9
COL18A1P39060 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.07□□□□□ -2.9
COL18A1P39060 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.08□□□□□ -2.9
COL18A1P39060 SNORA26.2-201ENST00000390922 122 ntBASIC-3.08□□□□□ -2.9
COL18A1P39060 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.09□□□□□ -2.9
COL18A1P39060 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.1□□□□□ -2.91
COL18A1P39060 RNU4-33P-201ENST00000364316 85 ntBASIC-3.12□□□□□ -2.91
COL18A1P39060 MIR124-1-201ENST00000385275 85 ntBASIC-3.12□□□□□ -2.91
COL18A1P39060 RNU6-776P-201ENST00000364403 104 ntBASIC-3.13□□□□□ -2.91
COL18A1P39060 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.13□□□□□ -2.91
COL18A1P39060 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.13□□□□□ -2.91
COL18A1P39060 MIR656-201ENST00000385224 78 ntBASIC-3.13□□□□□ -2.91
COL18A1P39060 RNY4P29-201ENST00000410801 97 ntBASIC-3.13□□□□□ -2.91
COL18A1P39060 MIR548AL-201ENST00000578416 97 ntBASIC-3.13□□□□□ -2.91
COL18A1P39060 SNORD78.1-201ENST00000390866 65 ntBASIC-3.14□□□□□ -2.91
COL18A1P39060 AC114801.3-201ENST00000510231 177 ntBASIC-3.14□□□□□ -2.91
COL18A1P39060 SNORD115.2-201ENST00000391126 59 ntBASIC-3.15□□□□□ -2.91
COL18A1P39060 RNU6-446P-201ENST00000362827 106 ntBASIC-3.15□□□□□ -2.91
COL18A1P39060 RNU6-836P-201ENST00000362920 107 ntBASIC-3.15□□□□□ -2.91
COL18A1P39060 RNA5SP224-201ENST00000365069 126 ntBASIC-3.16□□□□□ -2.92
COL18A1P39060 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.16□□□□□ -2.92
COL18A1P39060 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.17□□□□□ -2.92
COL18A1P39060 U2.22-201ENST00000636441 106 ntBASIC-3.17□□□□□ -2.92
COL18A1P39060 RNA5SP170-201ENST00000517150 101 ntBASIC-3.17□□□□□ -2.92
COL18A1P39060 RNU6-854P-201ENST00000364036 107 ntBASIC-3.18□□□□□ -2.92
COL18A1P39060 SNORD45C-201ENST00000383893 79 ntBASIC-3.19□□□□□ -2.92
COL18A1P39060 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.2□□□□□ -2.92
COL18A1P39060 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.21□□□□□ -2.92
COL18A1P39060 MIR548H4-201ENST00000408689 111 ntBASIC-3.22□□□□□ -2.92
COL18A1P39060 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.23□□□□□ -2.93
COL18A1P39060 RNA5SP225-201ENST00000410874 135 ntBASIC-3.26□□□□□ -2.93
COL18A1P39060 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.27□□□□□ -2.93
COL18A1P39060 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.28□□□□□ -2.93
COL18A1P39060 SNORD113-4-201ENST00000364802 75 ntBASIC-3.3□□□□□ -2.94
COL18A1P39060 MIR548AH-201ENST00000637109 76 ntBASIC-3.3□□□□□ -2.94
COL18A1P39060 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.34□□□□□ -2.94
COL18A1P39060 MIR1302-4-201ENST00000408701 150 ntBASIC-3.34□□□□□ -2.94
COL18A1P39060 RNU6-829P-201ENST00000363700 112 ntBASIC-3.35□□□□□ -2.95
COL18A1P39060 RNU6-808P-201ENST00000391233 108 ntBASIC-3.35□□□□□ -2.95
COL18A1P39060 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.35□□□□□ -2.95
COL18A1P39060 RNU6-422P-201ENST00000384632 107 ntBASIC-3.36□□□□□ -2.95
COL18A1P39060 RNU6-788P-201ENST00000390967 104 ntBASIC-3.36□□□□□ -2.95
COL18A1P39060 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.38□□□□□ -2.95
COL18A1P39060 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.38□□□□□ -2.95
COL18A1P39060 RNU4-85P-201ENST00000364675 123 ntBASIC-3.39□□□□□ -2.95
COL18A1P39060 MIR633-201ENST00000384821 98 ntBASIC-3.39□□□□□ -2.95
COL18A1P39060 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.39□□□□□ -2.95
COL18A1P39060 RNU6-838P-201ENST00000363399 108 ntBASIC-3.4□□□□□ -2.95
COL18A1P39060 RNU6-916P-201ENST00000516088 109 ntBASIC-3.41□□□□□ -2.96
COL18A1P39060 RNA5SP449-201ENST00000516871 130 ntBASIC-3.41□□□□□ -2.96
COL18A1P39060 MIR545-201ENST00000385085 106 ntBASIC-3.47□□□□□ -2.96
COL18A1P39060 AC125388.1-201ENST00000459631 156 ntBASIC-3.47□□□□□ -2.96
COL18A1P39060 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.5□□□□□ -2.97
COL18A1P39060 RNU6-59P-201ENST00000384787 107 ntBASIC-3.55□□□□□ -2.98
COL18A1P39060 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.56□□□□□ -2.98
COL18A1P39060 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.56□□□□□ -2.98
COL18A1P39060 AC079150.2-201ENST00000443733 78 ntBASIC-3.56□□□□□ -2.98
COL18A1P39060 RNU6-753P-201ENST00000363926 107 ntBASIC-3.58□□□□□ -2.98
COL18A1P39060 RNU6-499P-201ENST00000365615 107 ntBASIC-3.58□□□□□ -2.98
COL18A1P39060 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.61□□□□□ -2.99
COL18A1P39060 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.64□□□□□ -2.99
COL18A1P39060 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.65□□□□□ -2.99
COL18A1P39060 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.67□□□□□ -3
COL18A1P39060 RNU6-986P-201ENST00000363133 102 ntBASIC-3.68□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 6.9 ms