Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.96□□□□□ -2.88
TNFSF4P23510 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.98□□□□□ -2.89
TNFSF4P23510 FTX_4.1-201ENST00000616291 147 ntBASIC-2.99□□□□□ -2.89
TNFSF4P23510 RNU6-838P-201ENST00000363399 108 ntBASIC-3□□□□□ -2.89
TNFSF4P23510 SNORD54-201ENST00000459159 67 ntBASIC-3.01□□□□□ -2.89
TNFSF4P23510 SNORD113-3-201ENST00000364830 72 ntBASIC-3.02□□□□□ -2.89
TNFSF4P23510 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.03□□□□□ -2.89
TNFSF4P23510 RNU6-614P-201ENST00000384369 107 ntBASIC-3.03□□□□□ -2.89
TNFSF4P23510 U6.59-201ENST00000615686 107 ntBASIC-3.03□□□□□ -2.89
TNFSF4P23510 RNU6-936P-201ENST00000384005 107 ntBASIC-3.04□□□□□ -2.9
TNFSF4P23510 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.04□□□□□ -2.9
TNFSF4P23510 MIR548H4-201ENST00000408689 111 ntBASIC-3.05□□□□□ -2.9
TNFSF4P23510 RNU6-345P-201ENST00000517001 107 ntBASIC-3.06□□□□□ -2.9
TNFSF4P23510 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.08□□□□□ -2.9
TNFSF4P23510 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.08□□□□□ -2.9
TNFSF4P23510 RNU6-753P-201ENST00000363926 107 ntBASIC-3.09□□□□□ -2.9
TNFSF4P23510 RNU6-808P-201ENST00000391233 108 ntBASIC-3.1□□□□□ -2.91
TNFSF4P23510 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.1□□□□□ -2.91
TNFSF4P23510 RNA5SP93-201ENST00000362525 114 ntBASIC-3.12□□□□□ -2.91
TNFSF4P23510 RNY4P7-201ENST00000364600 96 ntBASIC-3.12□□□□□ -2.91
TNFSF4P23510 MIR4748-201ENST00000578076 82 ntBASIC-3.12□□□□□ -2.91
TNFSF4P23510 MIR1254-1-201ENST00000408257 97 ntBASIC-3.13□□□□□ -2.91
TNFSF4P23510 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.14□□□□□ -2.91
TNFSF4P23510 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.14□□□□□ -2.91
TNFSF4P23510 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.17□□□□□ -2.92
TNFSF4P23510 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.21□□□□□ -2.92
TNFSF4P23510 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.23□□□□□ -2.93
TNFSF4P23510 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.23□□□□□ -2.93
TNFSF4P23510 RNU6-930P-201ENST00000390938 100 ntBASIC-3.23□□□□□ -2.93
TNFSF4P23510 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.24□□□□□ -2.93
TNFSF4P23510 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.25□□□□□ -2.93
TNFSF4P23510 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.27□□□□□ -2.93
TNFSF4P23510 SNORD115.2-201ENST00000391126 59 ntBASIC-3.28□□□□□ -2.93
TNFSF4P23510 RNY4P9-201ENST00000363194 97 ntBASIC-3.3□□□□□ -2.94
TNFSF4P23510 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.32□□□□□ -2.94
TNFSF4P23510 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.32□□□□□ -2.94
TNFSF4P23510 MTND4LP19-201ENST00000403051 166 ntBASIC-3.32□□□□□ -2.94
TNFSF4P23510 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.33□□□□□ -2.94
TNFSF4P23510 RNA5SP224-201ENST00000365069 126 ntBASIC-3.33□□□□□ -2.94
TNFSF4P23510 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.33□□□□□ -2.94
TNFSF4P23510 MIR548F3-201ENST00000408509 87 ntBASIC-3.33□□□□□ -2.94
TNFSF4P23510 RNU6-836P-201ENST00000362920 107 ntBASIC-3.34□□□□□ -2.94
TNFSF4P23510 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.34□□□□□ -2.94
TNFSF4P23510 RNU6-230P-201ENST00000362457 104 ntBASIC-3.37□□□□□ -2.95
TNFSF4P23510 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.38□□□□□ -2.95
TNFSF4P23510 RNU6-141P-201ENST00000410499 105 ntBASIC-3.38□□□□□ -2.95
TNFSF4P23510 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.4□□□□□ -2.95
TNFSF4P23510 RNU6-986P-201ENST00000363133 102 ntBASIC-3.41□□□□□ -2.96
TNFSF4P23510 RNU6-59P-201ENST00000384787 107 ntBASIC-3.41□□□□□ -2.96
TNFSF4P23510 MIR656-201ENST00000385224 78 ntBASIC-3.41□□□□□ -2.96
TNFSF4P23510 SNORD45C-201ENST00000383893 79 ntBASIC-3.43□□□□□ -2.96
TNFSF4P23510 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.43□□□□□ -2.96
TNFSF4P23510 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.45□□□□□ -2.96
TNFSF4P23510 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.46□□□□□ -2.96
TNFSF4P23510 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.49□□□□□ -2.97
TNFSF4P23510 RNY4-201ENST00000516507 96 ntBASIC-3.51□□□□□ -2.97
TNFSF4P23510 MIR545-201ENST00000385085 106 ntBASIC-3.53□□□□□ -2.97
TNFSF4P23510 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.54□□□□□ -2.98
TNFSF4P23510 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.54□□□□□ -2.98
TNFSF4P23510 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.56□□□□□ -2.98
TNFSF4P23510 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.57□□□□□ -2.98
TNFSF4P23510 AL731768.1-201ENST00000603124 139 ntBASIC-3.63□□□□□ -2.99
TNFSF4P23510 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.69□□□□□ -3
TNFSF4P23510 RNU6-803P-201ENST00000516034 102 ntBASIC-3.78□□□□□ -3.01
TNFSF4P23510 RNU6-987P-201ENST00000384759 104 ntBASIC-3.79□□□□□ -3.02
TNFSF4P23510 RNU4-37P-201ENST00000410214 84 ntBASIC-3.79□□□□□ -3.02
TNFSF4P23510 MIR5693-201ENST00000577722 73 ntBASIC-3.79□□□□□ -3.02
TNFSF4P23510 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.81□□□□□ -3.02
TNFSF4P23510 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.82□□□□□ -3.02
TNFSF4P23510 RNU6-737P-201ENST00000365370 107 ntBASIC-3.86□□□□□ -3.03
TNFSF4P23510 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.86□□□□□ -3.03
TNFSF4P23510 RNU6-854P-201ENST00000364036 107 ntBASIC-3.87□□□□□ -3.03
TNFSF4P23510 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.88□□□□□ -3.03
TNFSF4P23510 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.91□□□□□ -3.04
TNFSF4P23510 RNY4P25-201ENST00000459254 96 ntBASIC-3.92□□□□□ -3.04
TNFSF4P23510 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.93□□□□□ -3.04
TNFSF4P23510 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.95□□□□□ -3.04
TNFSF4P23510 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.96□□□□□ -3.04
TNFSF4P23510 AL359920.1-201ENST00000618332 176 ntBASIC-3.96□□□□□ -3.04
TNFSF4P23510 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.99□□□□□ -3.05
TNFSF4P23510 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.01□□□□□ -3.05
TNFSF4P23510 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.03□□□□□ -3.05
TNFSF4P23510 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.04□□□□□ -3.06
TNFSF4P23510 RNU6-422P-201ENST00000384632 107 ntBASIC-4.05□□□□□ -3.06
TNFSF4P23510 U6.103-201ENST00000637085 61 ntBASIC-4.05□□□□□ -3.06
TNFSF4P23510 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.08□□□□□ -3.06
TNFSF4P23510 MIR509-1-201ENST00000385265 94 ntBASIC-4.08□□□□□ -3.06
TNFSF4P23510 MIR509-2-201ENST00000390724 91 ntBASIC-4.08□□□□□ -3.06
TNFSF4P23510 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.15□□□□□ -3.07
TNFSF4P23510 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.16□□□□□ -3.08
TNFSF4P23510 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.17□□□□□ -3.08
TNFSF4P23510 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.17□□□□□ -3.08
TNFSF4P23510 RNA5SP106-201ENST00000517274 100 ntBASIC-4.17□□□□□ -3.08
TNFSF4P23510 MIR124-1-201ENST00000385275 85 ntBASIC-4.23□□□□□ -3.09
TNFSF4P23510 RNY4P10-201ENST00000365571 96 ntBASIC-4.24□□□□□ -3.09
TNFSF4P23510 SNORD111B-201ENST00000408587 80 ntBASIC-4.24□□□□□ -3.09
TNFSF4P23510 SNORD114-13-201ENST00000364377 74 ntBASIC-4.26□□□□□ -3.09
TNFSF4P23510 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.26□□□□□ -3.09
TNFSF4P23510 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.31□□□□□ -3.1
TNFSF4P23510 RNU6-485P-201ENST00000363475 107 ntBASIC-4.38□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms