Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RNU6-147P-201ENST00000383983 107 ntBASIC-5.08□□□□□ -3.22
TRAV13-1A0A0B4J241 RNU6-22P-201ENST00000384355 107 ntBASIC-5.09□□□□□ -3.22
TRAV13-1A0A0B4J241 MIR494-201ENST00000349529 81 ntBASIC-5.11□□□□□ -3.23
TRAV13-1A0A0B4J241 MIR548AH-201ENST00000637109 76 ntBASIC-5.12□□□□□ -3.23
TRAV13-1A0A0B4J241 AC110620.1-201ENST00000416042 228 ntBASIC-5.13□□□□□ -3.23
TRAV13-1A0A0B4J241 RNU6-787P-201ENST00000384032 107 ntBASIC-5.14□□□□□ -3.23
TRAV13-1A0A0B4J241 RNU6-1154P-201ENST00000391001 104 ntBASIC-5.14□□□□□ -3.23
TRAV13-1A0A0B4J241 Y_RNA.520-201ENST00000384556 102 ntBASIC-5.15□□□□□ -3.23
TRAV13-1A0A0B4J241 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.15□□□□□ -3.23
TRAV13-1A0A0B4J241 MIR548AL-201ENST00000578416 97 ntBASIC-5.16□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6-1117P-201ENST00000384525 104 ntBASIC-5.17□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6-788P-201ENST00000390967 104 ntBASIC-5.17□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.19□□□□□ -3.24
TRAV13-1A0A0B4J241 MIR450A2-201ENST00000385022 100 ntBASIC-5.19□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.19□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6-313P-201ENST00000516317 112 ntBASIC-5.19□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6-422P-201ENST00000384632 107 ntBASIC-5.2□□□□□ -3.24
TRAV13-1A0A0B4J241 AP001094.1-201ENST00000579805 193 ntBASIC-5.2□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6-665P-201ENST00000384639 107 ntBASIC-5.21□□□□□ -3.24
TRAV13-1A0A0B4J241 RNU6-209P-201ENST00000384118 107 ntBASIC-5.23□□□□□ -3.25
TRAV13-1A0A0B4J241 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.24□□□□□ -3.25
TRAV13-1A0A0B4J241 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.26□□□□□ -3.25
TRAV13-1A0A0B4J241 MIR545-201ENST00000385085 106 ntBASIC-5.29□□□□□ -3.26
TRAV13-1A0A0B4J241 RNU4-33P-201ENST00000364316 85 ntBASIC-5.3□□□□□ -3.26
TRAV13-1A0A0B4J241 RNU6-446P-201ENST00000362827 106 ntBASIC-5.33□□□□□ -3.26
TRAV13-1A0A0B4J241 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.33□□□□□ -3.26
TRAV13-1A0A0B4J241 AC114801.3-201ENST00000510231 177 ntBASIC-5.33□□□□□ -3.26
TRAV13-1A0A0B4J241 RNU6-808P-201ENST00000391233 108 ntBASIC-5.34□□□□□ -3.26
TRAV13-1A0A0B4J241 RNA5SP89-201ENST00000410300 108 ntBASIC-5.35□□□□□ -3.27
TRAV13-1A0A0B4J241 RNY4P30-201ENST00000410216 95 ntBASIC-5.36□□□□□ -3.27
TRAV13-1A0A0B4J241 RNU6-820P-201ENST00000384273 107 ntBASIC-5.4□□□□□ -3.27
TRAV13-1A0A0B4J241 AC090425.1-201ENST00000610007 140 ntBASIC-5.41□□□□□ -3.28
TRAV13-1A0A0B4J241 RNU6-406P-201ENST00000516470 107 ntBASIC-5.42□□□□□ -3.28
TRAV13-1A0A0B4J241 RNU6-294P-201ENST00000364999 102 ntBASIC-5.45□□□□□ -3.28
TRAV13-1A0A0B4J241 RNU6-919P-201ENST00000516731 104 ntBASIC-5.46□□□□□ -3.28
TRAV13-1A0A0B4J241 RNU6-794P-201ENST00000517261 64 ntBASIC-5.46□□□□□ -3.28
TRAV13-1A0A0B4J241 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.47□□□□□ -3.29
TRAV13-1A0A0B4J241 SNORD113-4-201ENST00000364802 75 ntBASIC-5.48□□□□□ -3.29
TRAV13-1A0A0B4J241 RNU6-215P-201ENST00000365169 102 ntBASIC-5.49□□□□□ -3.29
TRAV13-1A0A0B4J241 RNU6-471P-201ENST00000383944 106 ntBASIC-5.52□□□□□ -3.29
TRAV13-1A0A0B4J241 MIR3202-2-201ENST00000635980 79 ntBASIC-5.52□□□□□ -3.29
TRAV13-1A0A0B4J241 RNU6-857P-201ENST00000515893 110 ntBASIC-5.54□□□□□ -3.3
TRAV13-1A0A0B4J241 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.55□□□□□ -3.3
TRAV13-1A0A0B4J241 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.56□□□□□ -3.3
TRAV13-1A0A0B4J241 SNORD20-201ENST00000384550 80 ntBASIC-5.56□□□□□ -3.3
TRAV13-1A0A0B4J241 RNU6-838P-201ENST00000363399 108 ntBASIC-5.6□□□□□ -3.31
TRAV13-1A0A0B4J241 RNU6-59P-201ENST00000384787 107 ntBASIC-5.61□□□□□ -3.31
TRAV13-1A0A0B4J241 Y_RNA.694-201ENST00000516677 117 ntBASIC-5.61□□□□□ -3.31
TRAV13-1A0A0B4J241 RNU6-279P-201ENST00000391297 101 ntBASIC-5.62□□□□□ -3.31
TRAV13-1A0A0B4J241 Y_RNA.81-201ENST00000362997 102 ntBASIC-5.63□□□□□ -3.31
TRAV13-1A0A0B4J241 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.64□□□□□ -3.31
TRAV13-1A0A0B4J241 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.64□□□□□ -3.31
TRAV13-1A0A0B4J241 RNU6-153P-201ENST00000364422 104 ntBASIC-5.66□□□□□ -3.32
TRAV13-1A0A0B4J241 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.67□□□□□ -3.32
TRAV13-1A0A0B4J241 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.67□□□□□ -3.32
TRAV13-1A0A0B4J241 RNU6-44P-201ENST00000384045 107 ntBASIC-5.68□□□□□ -3.32
TRAV13-1A0A0B4J241 RNU6-829P-201ENST00000363700 112 ntBASIC-5.7□□□□□ -3.32
TRAV13-1A0A0B4J241 MIR1255A-201ENST00000408338 113 ntBASIC-5.7□□□□□ -3.32
TRAV13-1A0A0B4J241 MIR548M-201ENST00000408260 86 ntBASIC-5.72□□□□□ -3.33
TRAV13-1A0A0B4J241 SNORD113-1-201ENST00000365321 69 ntBASIC-5.74□□□□□ -3.33
TRAV13-1A0A0B4J241 RNY4P13-201ENST00000384284 96 ntBASIC-5.75□□□□□ -3.33
TRAV13-1A0A0B4J241 Y_RNA.369-201ENST00000365568 117 ntBASIC-5.76□□□□□ -3.33
TRAV13-1A0A0B4J241 MIR3910-1-201ENST00000580936 111 ntBASIC-5.76□□□□□ -3.33
TRAV13-1A0A0B4J241 RNU4-85P-201ENST00000364675 123 ntBASIC-5.77□□□□□ -3.33
TRAV13-1A0A0B4J241 MIR633-201ENST00000384821 98 ntBASIC-5.77□□□□□ -3.33
TRAV13-1A0A0B4J241 RNA5SP449-201ENST00000516871 130 ntBASIC-5.77□□□□□ -3.33
TRAV13-1A0A0B4J241 SNORA26.2-201ENST00000390922 122 ntBASIC-5.78□□□□□ -3.33
TRAV13-1A0A0B4J241 RNU6-986P-201ENST00000363133 102 ntBASIC-5.79□□□□□ -3.34
TRAV13-1A0A0B4J241 MIR5582-201ENST00000579697 68 ntBASIC-5.79□□□□□ -3.34
TRAV13-1A0A0B4J241 AC099654.10-201ENST00000640395 161 ntBASIC-5.83□□□□□ -3.34
TRAV13-1A0A0B4J241 RNU6-573P-201ENST00000383938 106 ntBASIC-5.87□□□□□ -3.35
TRAV13-1A0A0B4J241 MIR4662A-201ENST00000637499 67 ntBASIC-5.89□□□□□ -3.35
TRAV13-1A0A0B4J241 AL606753.1-201ENST00000427435 87 ntBASIC-5.96□□□□□ -3.36
TRAV13-1A0A0B4J241 MIR4719-201ENST00000585233 84 ntBASIC-5.97□□□□□ -3.37
TRAV13-1A0A0B4J241 RNA5SP225-201ENST00000410874 135 ntBASIC-5.98□□□□□ -3.37
TRAV13-1A0A0B4J241 RNU6-753P-201ENST00000363926 107 ntBASIC-5.99□□□□□ -3.37
TRAV13-1A0A0B4J241 Y_RNA.165-201ENST00000363721 102 ntBASIC-6□□□□□ -3.37
TRAV13-1A0A0B4J241 AC079150.2-201ENST00000443733 78 ntBASIC-6□□□□□ -3.37
TRAV13-1A0A0B4J241 SNORD78.1-201ENST00000390866 65 ntBASIC-6.02□□□□□ -3.37
TRAV13-1A0A0B4J241 SNORD73B-201ENST00000364394 72 ntBASIC-6.03□□□□□ -3.37
TRAV13-1A0A0B4J241 RNU6-1024P-201ENST00000384199 107 ntBASIC-6.04□□□□□ -3.38
TRAV13-1A0A0B4J241 RNU6-627P-201ENST00000364032 102 ntBASIC-6.05□□□□□ -3.38
TRAV13-1A0A0B4J241 RNU6-930P-201ENST00000390938 100 ntBASIC-6.06□□□□□ -3.38
TRAV13-1A0A0B4J241 RNY4P29-201ENST00000410801 97 ntBASIC-6.07□□□□□ -3.38
TRAV13-1A0A0B4J241 MIR548F3-201ENST00000408509 87 ntBASIC-6.08□□□□□ -3.38
TRAV13-1A0A0B4J241 MIR3668-201ENST00000582138 75 ntBASIC-6.08□□□□□ -3.38
TRAV13-1A0A0B4J241 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.12□□□□□ -3.39
TRAV13-1A0A0B4J241 MIR363-201ENST00000384840 75 ntBASIC-6.17□□□□□ -3.4
TRAV13-1A0A0B4J241 RNU6-936P-201ENST00000384005 107 ntBASIC-6.19□□□□□ -3.4
TRAV13-1A0A0B4J241 MT-TR-201ENST00000387439 65 ntBASIC-6.19□□□□□ -3.4
TRAV13-1A0A0B4J241 RNU6-620P-201ENST00000384017 96 ntBASIC-6.28□□□□□ -3.41
TRAV13-1A0A0B4J241 AC125388.1-201ENST00000459631 156 ntBASIC-6.29□□□□□ -3.42
TRAV13-1A0A0B4J241 RNU6-499P-201ENST00000365615 107 ntBASIC-6.34□□□□□ -3.42
TRAV13-1A0A0B4J241 RNU6-1275P-201ENST00000391087 107 ntBASIC-6.35□□□□□ -3.43
TRAV13-1A0A0B4J241 RNU6-916P-201ENST00000516088 109 ntBASIC-6.36□□□□□ -3.43
TRAV13-1A0A0B4J241 snosnR66.1-201ENST00000391095 99 ntBASIC-6.37□□□□□ -3.43
TRAV13-1A0A0B4J241 RNA5SP170-201ENST00000517150 101 ntBASIC-6.37□□□□□ -3.43
TRAV13-1A0A0B4J241 SNORD111B-201ENST00000408587 80 ntBASIC-6.4□□□□□ -3.43
TRAV13-1A0A0B4J241 MIR3671-201ENST00000580455 88 ntBASIC-6.4□□□□□ -3.43
TRAV13-1A0A0B4J241 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-6.43□□□□□ -3.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms