Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.83□□□□□ -3.02
CHD7Q9P2D1 MIR548X2-201ENST00000579776 100 ntBASIC-3.83□□□□□ -3.02
CHD7Q9P2D1 U6.111-201ENST00000636093 83 ntBASIC-3.83□□□□□ -3.02
CHD7Q9P2D1 MIR1245B-201ENST00000636115 69 ntBASIC-3.83□□□□□ -3.02
CHD7Q9P2D1 SNORD116-18-201ENST00000383961 92 ntBASIC-3.83□□□□□ -3.02
CHD7Q9P2D1 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.83□□□□□ -3.02
CHD7Q9P2D1 RNU5A-2P-201ENST00000384337 116 ntBASIC-3.84□□□□□ -3.02
CHD7Q9P2D1 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.84□□□□□ -3.02
CHD7Q9P2D1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.84□□□□□ -3.02
CHD7Q9P2D1 MTND4LP9-201ENST00000427694 174 ntBASIC-3.85□□□□□ -3.03
CHD7Q9P2D1 RNU6-314P-201ENST00000516574 104 ntBASIC-3.85□□□□□ -3.03
CHD7Q9P2D1 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.85□□□□□ -3.03
CHD7Q9P2D1 SNORA33.2-201ENST00000365413 134 ntBASIC-3.85□□□□□ -3.03
CHD7Q9P2D1 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.85□□□□□ -3.03
CHD7Q9P2D1 RNU6-713P-201ENST00000384761 107 ntBASIC-3.86□□□□□ -3.03
CHD7Q9P2D1 RNU6-930P-201ENST00000390938 100 ntBASIC-3.87□□□□□ -3.03
CHD7Q9P2D1 AC022559.1-201ENST00000520905 205 ntBASIC-3.87□□□□□ -3.03
CHD7Q9P2D1 SNORA40-201ENST00000388090 126 ntBASIC-3.87□□□□□ -3.03
CHD7Q9P2D1 AL031737.1-201ENST00000450125 223 ntBASIC-3.87□□□□□ -3.03
CHD7Q9P2D1 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.87□□□□□ -3.03
CHD7Q9P2D1 DEFB108C-201ENST00000400154 252 ntBASIC-3.88□□□□□ -3.03
CHD7Q9P2D1 MIR5588-201ENST00000581890 63 ntBASIC-3.88□□□□□ -3.03
CHD7Q9P2D1 Y_RNA.197-201ENST00000364004 102 ntBASIC-3.89□□□□□ -3.03
CHD7Q9P2D1 AC141273.2-201ENST00000618989 130 ntBASIC-3.89□□□□□ -3.03
CHD7Q9P2D1 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.89□□□□□ -3.03
CHD7Q9P2D1 RNU6-471P-201ENST00000383944 106 ntBASIC-3.89□□□□□ -3.03
CHD7Q9P2D1 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.9□□□□□ -3.03
CHD7Q9P2D1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.91□□□□□ -3.04
CHD7Q9P2D1 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.91□□□□□ -3.04
CHD7Q9P2D1 MIR4666B-201ENST00000578142 81 ntBASIC-3.91□□□□□ -3.04
CHD7Q9P2D1 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.92□□□□□ -3.04
CHD7Q9P2D1 IGLL4P-201ENST00000614590 133 ntBASIC-3.92□□□□□ -3.04
CHD7Q9P2D1 MTND5P20-201ENST00000448677 143 ntBASIC-3.93□□□□□ -3.04
CHD7Q9P2D1 RNY4P14-201ENST00000363656 96 ntBASIC-3.93□□□□□ -3.04
CHD7Q9P2D1 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.95□□□□□ -3.04
CHD7Q9P2D1 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.96□□□□□ -3.04
CHD7Q9P2D1 MIR569-201ENST00000385228 96 ntBASIC-3.96□□□□□ -3.04
CHD7Q9P2D1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.97□□□□□ -3.04
CHD7Q9P2D1 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.98□□□□□ -3.05
CHD7Q9P2D1 AL353621.2-201ENST00000605340 133 ntBASIC-3.99□□□□□ -3.05
CHD7Q9P2D1 RNU6-394P-201ENST00000410735 107 ntBASIC-3.99□□□□□ -3.05
CHD7Q9P2D1 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.99□□□□□ -3.05
CHD7Q9P2D1 SNORA26.2-201ENST00000390922 122 ntBASIC-4□□□□□ -3.05
CHD7Q9P2D1 Y_RNA.343-201ENST00000365354 112 ntBASIC-4□□□□□ -3.05
CHD7Q9P2D1 RNU6-242P-201ENST00000384359 107 ntBASIC-4.01□□□□□ -3.05
CHD7Q9P2D1 MIR548T-201ENST00000408369 74 ntBASIC-4.01□□□□□ -3.05
CHD7Q9P2D1 MIR4680-201ENST00000580906 66 ntBASIC-4.02□□□□□ -3.05
CHD7Q9P2D1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.02□□□□□ -3.05
CHD7Q9P2D1 RNU6-956P-201ENST00000458868 103 ntBASIC-4.02□□□□□ -3.05
CHD7Q9P2D1 RNU6-635P-201ENST00000516651 102 ntBASIC-4.02□□□□□ -3.05
CHD7Q9P2D1 AC009094.1-201ENST00000564443 426 ntBASIC-4.02□□□□□ -3.05
CHD7Q9P2D1 Y_RNA.535-201ENST00000384612 99 ntBASIC-4.03□□□□□ -3.06
CHD7Q9P2D1 AC006362.1-201ENST00000567392 174 ntBASIC-4.03□□□□□ -3.06
CHD7Q9P2D1 RNU6-936P-201ENST00000384005 107 ntBASIC-4.04□□□□□ -3.06
CHD7Q9P2D1 Y_RNA.431-201ENST00000384086 102 ntBASIC-4.04□□□□□ -3.06
CHD7Q9P2D1 Y_RNA.554-201ENST00000384672 102 ntBASIC-4.05□□□□□ -3.06
CHD7Q9P2D1 SNORD19B-201ENST00000459623 84 ntBASIC-4.05□□□□□ -3.06
CHD7Q9P2D1 Y_RNA.386-201ENST00000383913 105 ntBASIC-4.07□□□□□ -3.06
CHD7Q9P2D1 RNU6-751P-201ENST00000516382 101 ntBASIC-4.1□□□□□ -3.07
CHD7Q9P2D1 RNU6-506P-201ENST00000516553 94 ntBASIC-4.11□□□□□ -3.07
CHD7Q9P2D1 MIR488-201ENST00000365739 83 ntBASIC-4.11□□□□□ -3.07
CHD7Q9P2D1 MIR548F1-201ENST00000408667 84 ntBASIC-4.12□□□□□ -3.07
CHD7Q9P2D1 RNU6-111P-201ENST00000517179 105 ntBASIC-4.12□□□□□ -3.07
CHD7Q9P2D1 MTND4P29-201ENST00000503122 1372 ntBASIC-4.13□□□□□ -3.07
CHD7Q9P2D1 MIR450A1-201ENST00000362262 91 ntBASIC-4.13□□□□□ -3.07
CHD7Q9P2D1 RNU6-804P-201ENST00000384286 107 ntBASIC-4.13□□□□□ -3.07
CHD7Q9P2D1 MIR3688-2-201ENST00000636963 87 ntBASIC-4.13□□□□□ -3.07
CHD7Q9P2D1 RNU6-985P-201ENST00000410182 104 ntBASIC-4.14□□□□□ -3.07
CHD7Q9P2D1 AC079150.2-201ENST00000443733 78 ntBASIC-4.14□□□□□ -3.07
CHD7Q9P2D1 SNORD11.1-201ENST00000459482 85 ntBASIC-4.14□□□□□ -3.07
CHD7Q9P2D1 MIR633-201ENST00000384821 98 ntBASIC-4.14□□□□□ -3.07
CHD7Q9P2D1 MTND5P41-201ENST00000517498 206 ntBASIC-4.15□□□□□ -3.07
CHD7Q9P2D1 MIR3128-201ENST00000581957 66 ntBASIC-4.15□□□□□ -3.07
CHD7Q9P2D1 RNU6-640P-201ENST00000363693 105 ntBASIC-4.15□□□□□ -3.07
CHD7Q9P2D1 RNU6-589P-201ENST00000516485 107 ntBASIC-4.15□□□□□ -3.07
CHD7Q9P2D1 RNU6-257P-201ENST00000410238 98 ntBASIC-4.16□□□□□ -3.08
CHD7Q9P2D1 Y_RNA.356-201ENST00000365475 113 ntBASIC-4.18□□□□□ -3.08
CHD7Q9P2D1 Y_RNA.574-201ENST00000384766 95 ntBASIC-4.19□□□□□ -3.08
CHD7Q9P2D1 RNU6-1137P-201ENST00000517073 99 ntBASIC-4.19□□□□□ -3.08
CHD7Q9P2D1 Y_RNA.297-201ENST00000364950 91 ntBASIC-4.2□□□□□ -3.08
CHD7Q9P2D1 RNU6-49P-201ENST00000384256 107 ntBASIC-4.2□□□□□ -3.08
CHD7Q9P2D1 AC069439.1-201ENST00000494739 167 ntBASIC-4.2□□□□□ -3.08
CHD7Q9P2D1 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.2□□□□□ -3.08
CHD7Q9P2D1 Y_RNA.460-201ENST00000384255 102 ntBASIC-4.2□□□□□ -3.08
CHD7Q9P2D1 MIR3671-201ENST00000580455 88 ntBASIC-4.21□□□□□ -3.08
CHD7Q9P2D1 RNU7-120P-201ENST00000459334 63 ntBASIC-4.21□□□□□ -3.08
CHD7Q9P2D1 SNORD42.2-201ENST00000365570 69 ntBASIC-4.22□□□□□ -3.08
CHD7Q9P2D1 RNU6-614P-201ENST00000384369 107 ntBASIC-4.22□□□□□ -3.08
CHD7Q9P2D1 RNU6-718P-201ENST00000516166 105 ntBASIC-4.22□□□□□ -3.08
CHD7Q9P2D1 U6.59-201ENST00000615686 107 ntBASIC-4.22□□□□□ -3.08
CHD7Q9P2D1 RNY3P1-201ENST00000365085 102 ntBASIC-4.22□□□□□ -3.09
CHD7Q9P2D1 MIR1277-201ENST00000408536 78 ntBASIC-4.22□□□□□ -3.09
CHD7Q9P2D1 RNU6-499P-201ENST00000365615 107 ntBASIC-4.23□□□□□ -3.09
CHD7Q9P2D1 U4.5-201ENST00000617137 123 ntBASIC-4.24□□□□□ -3.09
CHD7Q9P2D1 MIR1302-1-201ENST00000637932 143 ntBASIC-4.24□□□□□ -3.09
CHD7Q9P2D1 RNU6-200P-201ENST00000364743 107 ntBASIC-4.25□□□□□ -3.09
CHD7Q9P2D1 AC008267.6-201ENST00000441664 139 ntBASIC-4.26□□□□□ -3.09
CHD7Q9P2D1 RNU6-820P-201ENST00000384273 107 ntBASIC-4.26□□□□□ -3.09
CHD7Q9P2D1 RNU6-724P-201ENST00000390958 105 ntBASIC-4.26□□□□□ -3.09
CHD7Q9P2D1 RNU6-32P-201ENST00000383948 107 ntBASIC-4.27□□□□□ -3.09
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms