Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.38□□□□□ -2.63
VPS45Q9NRW7 MIR4441-201ENST00000582623 100 ntBASIC-1.38□□□□□ -2.63
VPS45Q9NRW7 RNU6-530P-201ENST00000391180 107 ntBASIC-1.39□□□□□ -2.63
VPS45Q9NRW7 SNORD113-4-201ENST00000364802 75 ntBASIC-1.4□□□□□ -2.63
VPS45Q9NRW7 RNU6-400P-201ENST00000391173 106 ntBASIC-1.4□□□□□ -2.63
VPS45Q9NRW7 MIR5591-201ENST00000578248 65 ntBASIC-1.4□□□□□ -2.63
VPS45Q9NRW7 RNU6-563P-201ENST00000364872 108 ntBASIC-1.41□□□□□ -2.64
VPS45Q9NRW7 HLA-S-202ENST00000425174 53 ntBASIC-1.41□□□□□ -2.64
VPS45Q9NRW7 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.43□□□□□ -2.64
VPS45Q9NRW7 RNU6-361P-201ENST00000364454 107 ntBASIC-1.44□□□□□ -2.64
VPS45Q9NRW7 SNORD60-201ENST00000383903 83 ntBASIC-1.44□□□□□ -2.64
VPS45Q9NRW7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.44□□□□□ -2.64
VPS45Q9NRW7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.45□□□□□ -2.64
VPS45Q9NRW7 AC013734.1-201ENST00000619329 111 ntBASIC-1.45□□□□□ -2.64
VPS45Q9NRW7 MIR202-201ENST00000362219 110 ntBASIC-1.46□□□□□ -2.64
VPS45Q9NRW7 RNU6-226P-201ENST00000363778 107 ntBASIC-1.47□□□□□ -2.64
VPS45Q9NRW7 SNORA17.4-201ENST00000391287 132 ntBASIC-1.47□□□□□ -2.64
VPS45Q9NRW7 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.47□□□□□ -2.64
VPS45Q9NRW7 MIR4770-201ENST00000579149 58 ntBASIC-1.47□□□□□ -2.64
VPS45Q9NRW7 RNA5SP86-201ENST00000390869 98 ntBASIC-1.5□□□□□ -2.65
VPS45Q9NRW7 RNU4-33P-201ENST00000364316 85 ntBASIC-1.51□□□□□ -2.65
VPS45Q9NRW7 U6.97-201ENST00000636904 101 ntBASIC-1.51□□□□□ -2.65
VPS45Q9NRW7 MIR4426-201ENST00000640330 63 ntBASIC-1.51□□□□□ -2.65
VPS45Q9NRW7 MIR548N-201ENST00000408742 75 ntBASIC-1.53□□□□□ -2.65
VPS45Q9NRW7 RNY4P27-201ENST00000363341 96 ntBASIC-1.54□□□□□ -2.66
VPS45Q9NRW7 RNU6-980P-201ENST00000516925 103 ntBASIC-1.54□□□□□ -2.66
VPS45Q9NRW7 MIR487B-201ENST00000385021 84 ntBASIC-1.55□□□□□ -2.66
VPS45Q9NRW7 SNORD18C-201ENST00000362704 69 ntBASIC-1.56□□□□□ -2.66
VPS45Q9NRW7 RNU6-695P-201ENST00000391157 104 ntBASIC-1.56□□□□□ -2.66
VPS45Q9NRW7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.56□□□□□ -2.66
VPS45Q9NRW7 RNU6-176P-201ENST00000517196 105 ntBASIC-1.56□□□□□ -2.66
VPS45Q9NRW7 MIR548H1-201ENST00000408610 102 ntBASIC-1.58□□□□□ -2.66
VPS45Q9NRW7 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.58□□□□□ -2.66
VPS45Q9NRW7 MIR1246-201ENST00000636535 73 ntBASIC-1.58□□□□□ -2.66
VPS45Q9NRW7 RNU6-614P-201ENST00000384369 107 ntBASIC-1.59□□□□□ -2.66
VPS45Q9NRW7 RNU6-300P-201ENST00000459080 104 ntBASIC-1.59□□□□□ -2.66
VPS45Q9NRW7 U6.59-201ENST00000615686 107 ntBASIC-1.59□□□□□ -2.66
VPS45Q9NRW7 RNU6-742P-201ENST00000365289 107 ntBASIC-1.6□□□□□ -2.67
VPS45Q9NRW7 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.61□□□□□ -2.67
VPS45Q9NRW7 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.62□□□□□ -2.67
VPS45Q9NRW7 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.62□□□□□ -2.67
VPS45Q9NRW7 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.62□□□□□ -2.67
VPS45Q9NRW7 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.63□□□□□ -2.67
VPS45Q9NRW7 MIR581-201ENST00000384895 96 ntBASIC-1.64□□□□□ -2.67
VPS45Q9NRW7 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.66□□□□□ -2.68
VPS45Q9NRW7 RNU6-936P-201ENST00000384005 107 ntBASIC-1.67□□□□□ -2.68
VPS45Q9NRW7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.67□□□□□ -2.68
VPS45Q9NRW7 MIR3123-201ENST00000583417 75 ntBASIC-1.68□□□□□ -2.68
VPS45Q9NRW7 SNORD18.1-201ENST00000363807 70 ntBASIC-1.69□□□□□ -2.68
VPS45Q9NRW7 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.7□□□□□ -2.68
VPS45Q9NRW7 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.7□□□□□ -2.68
VPS45Q9NRW7 MIR548AL-201ENST00000578416 97 ntBASIC-1.7□□□□□ -2.68
VPS45Q9NRW7 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.71□□□□□ -2.68
VPS45Q9NRW7 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.71□□□□□ -2.68
VPS45Q9NRW7 RNU6-808P-201ENST00000391233 108 ntBASIC-1.71□□□□□ -2.68
VPS45Q9NRW7 AC108019.1-201ENST00000512540 175 ntBASIC-1.71□□□□□ -2.68
VPS45Q9NRW7 MIR379-201ENST00000362218 67 ntBASIC-1.72□□□□□ -2.68
VPS45Q9NRW7 MTND4LP19-201ENST00000403051 166 ntBASIC-1.72□□□□□ -2.68
VPS45Q9NRW7 MIR4756-201ENST00000577874 78 ntBASIC-1.73□□□□□ -2.69
VPS45Q9NRW7 RNU6-841P-201ENST00000383872 107 ntBASIC-1.74□□□□□ -2.69
VPS45Q9NRW7 RNU6-753P-201ENST00000363926 107 ntBASIC-1.75□□□□□ -2.69
VPS45Q9NRW7 RNU6-838P-201ENST00000363399 108 ntBASIC-1.76□□□□□ -2.69
VPS45Q9NRW7 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.76□□□□□ -2.69
VPS45Q9NRW7 MIR548AM-201ENST00000584298 74 ntBASIC-1.76□□□□□ -2.69
VPS45Q9NRW7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.76□□□□□ -2.69
VPS45Q9NRW7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.77□□□□□ -2.69
VPS45Q9NRW7 RNU6-983P-201ENST00000516004 103 ntBASIC-1.77□□□□□ -2.69
VPS45Q9NRW7 MIR4317-201ENST00000637586 65 ntBASIC-1.77□□□□□ -2.69
VPS45Q9NRW7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.78□□□□□ -2.69
VPS45Q9NRW7 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.79□□□□□ -2.7
VPS45Q9NRW7 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.81□□□□□ -2.7
VPS45Q9NRW7 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.81□□□□□ -2.7
VPS45Q9NRW7 RNU6-68P-201ENST00000516576 104 ntBASIC-1.81□□□□□ -2.7
VPS45Q9NRW7 MIR664B-201ENST00000626756 61 ntBASIC-1.82□□□□□ -2.7
VPS45Q9NRW7 RNU4-88P-201ENST00000411220 86 ntBASIC-1.83□□□□□ -2.7
VPS45Q9NRW7 MIR548W-201ENST00000581970 74 ntBASIC-1.84□□□□□ -2.7
VPS45Q9NRW7 snoU13.10-201ENST00000459301 103 ntBASIC-1.87□□□□□ -2.71
VPS45Q9NRW7 RNU6-930P-201ENST00000390938 100 ntBASIC-1.88□□□□□ -2.71
VPS45Q9NRW7 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.88□□□□□ -2.71
VPS45Q9NRW7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.88□□□□□ -2.71
VPS45Q9NRW7 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.89□□□□□ -2.71
VPS45Q9NRW7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.9□□□□□ -2.71
VPS45Q9NRW7 MIR548H4-201ENST00000408689 111 ntBASIC-1.9□□□□□ -2.71
VPS45Q9NRW7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.9□□□□□ -2.71
VPS45Q9NRW7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.9□□□□□ -2.71
VPS45Q9NRW7 RNU6-912P-201ENST00000363800 104 ntBASIC-1.91□□□□□ -2.72
VPS45Q9NRW7 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.91□□□□□ -2.72
VPS45Q9NRW7 RNU6-119P-201ENST00000364882 107 ntBASIC-1.93□□□□□ -2.72
VPS45Q9NRW7 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.93□□□□□ -2.72
VPS45Q9NRW7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
VPS45Q9NRW7 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.94□□□□□ -2.72
VPS45Q9NRW7 RNU6-822P-201ENST00000362707 106 ntBASIC-1.95□□□□□ -2.72
VPS45Q9NRW7 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.96□□□□□ -2.72
VPS45Q9NRW7 MIR548F3-201ENST00000408509 87 ntBASIC-1.96□□□□□ -2.72
VPS45Q9NRW7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.96□□□□□ -2.72
VPS45Q9NRW7 RNY4P7-201ENST00000364600 96 ntBASIC-1.97□□□□□ -2.72
VPS45Q9NRW7 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.97□□□□□ -2.72
VPS45Q9NRW7 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.98□□□□□ -2.73
VPS45Q9NRW7 RNA5SP405-201ENST00000363059 114 ntBASIC-1.99□□□□□ -2.73
VPS45Q9NRW7 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms